Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C02
(469 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 24 0.81
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 1.1
AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cogna... 21 5.7
AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock prote... 21 5.7
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 21 5.7
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 21 7.5
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 7.5
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 7.5
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 7.5
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 21 7.5
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 21 7.5
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.8 bits (49), Expect = 0.81
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -2
Query: 204 WIPFVIYVAEFLLCPLWLSTIYLSL 130
+ PF+I+ FLLC + ++ L
Sbjct: 86 YCPFIIFTVHFLLCTYYFYYAFIIL 110
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 23.4 bits (48), Expect = 1.1
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 321 RLMSTDLRVEATISVHRI*FPMLPLLIQFYIAKVSVRTQKL 443
RLMS +L ++ R F L FYI+ + R + L
Sbjct: 155 RLMSNNLNKNNVVATGRFTFHKKNLYYSFYISDKAARPRSL 195
>AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cognate
70 protein.
Length = 196
Score = 21.0 bits (42), Expect = 5.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 230 TQHVTNKSLSDSVTKTSIEFQRAMHGGDDSTT 325
TQ K S T+ SIE G D STT
Sbjct: 93 TQCERAKRTLSSATQASIEIDSLFDGIDYSTT 124
>AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock protein
70 protein.
Length = 196
Score = 21.0 bits (42), Expect = 5.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 230 TQHVTNKSLSDSVTKTSIEFQRAMHGGDDSTT 325
TQ K S T+ SIE G D STT
Sbjct: 93 TQCERAKRTLSSATQASIEIDSLFDGIDYSTT 124
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 21.0 bits (42), Expect = 5.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -2
Query: 171 LLCPLWLSTIYL 136
+LC LW++T+ L
Sbjct: 284 ILCALWITTLLL 295
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 20.6 bits (41), Expect = 7.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 456 LMEW*ASVFELRPLRCKTELVEEASEIRSD 367
+ME+ SVF L +C +V E ++ D
Sbjct: 2 MMEFLKSVFRLDQDQCSHRIVREHLGLKHD 31
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 20.6 bits (41), Expect = 7.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 456 LMEW*ASVFELRPLRCKTELVEEASEIRSD 367
+ME+ SVF L +C +V E ++ D
Sbjct: 316 MMEFLKSVFRLDQDQCSHRIVREHLGLKHD 345
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 7.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 456 LMEW*ASVFELRPLRCKTELVEEASEIRSD 367
+ME+ SVF L +C +V E ++ D
Sbjct: 549 MMEFLKSVFRLDQDQCSHRIVREHLGLKHD 578
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.6 bits (41), Expect = 7.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 456 LMEW*ASVFELRPLRCKTELVEEASEIRSD 367
+ME+ SVF L +C +V E ++ D
Sbjct: 549 MMEFLKSVFRLDQDQCSHRIVREHLGLKHD 578
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 20.6 bits (41), Expect = 7.5
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = -1
Query: 316 IITTMHSSLKLNTCFCNTITKTLIGNMLSRFRNIVFYVDS 197
+I + + LN+CFC+ + N L ++ DS
Sbjct: 87 LIVALAFQVILNSCFCDPAKWIRLNNNLQYIDEVLKNRDS 126
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 20.6 bits (41), Expect = 7.5
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = -1
Query: 316 IITTMHSSLKLNTCFCNTITKTLIGNMLSRFRNIVFYVDS 197
+I + + LN+CFC+ + N L ++ DS
Sbjct: 87 LIVALAFQVILNSCFCDPAKWIRLNNNLQYIDEVLKNRDS 126
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,501
Number of Sequences: 336
Number of extensions: 2411
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -