Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C02
(469 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0415 - 8263459-8263611,8263788-8263919,8264841-8264936,826... 31 0.35
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 31 0.35
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 31 0.61
10_08_0460 - 18098187-18098248,18098331-18098399,18098468-180994... 30 1.1
08_01_0378 + 3360215-3360253,3360326-3360437,3362176-3362213,336... 30 1.1
04_04_1193 + 31634043-31634349,31634685-31634847,31635048-316366... 30 1.1
12_02_1167 + 26647293-26648356,26648493-26648577,26649129-266491... 29 1.4
05_02_0034 + 5856165-5856183,5858845-5859173,5859275-5859277,585... 29 2.5
05_01_0213 - 1606383-1606816,1607695-1608355 29 2.5
06_03_0433 - 20718726-20719895 28 3.3
01_05_0525 + 22928295-22928492,22929435-22929584,22929679-229298... 28 3.3
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 28 4.3
01_01_0057 - 435295-435731,435866-435914,436041-436437,437807-43... 28 4.3
09_06_0056 - 20561645-20561920,20562024-20562611,20562698-205630... 27 5.7
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 27 5.7
08_02_0648 - 19694538-19696569,19697151-19697998 27 5.7
06_03_1032 + 27029698-27029785,27030640-27031275,27031739-270319... 27 5.7
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 27 5.7
04_04_1324 + 32659752-32661972,32662067-32662761 27 5.7
03_05_1097 + 30393336-30393578,30393661-30393780,30393859-303940... 27 5.7
02_05_0933 + 32846658-32846729,32847038-32847133,32847243-328474... 27 5.7
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 27 7.5
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 27 7.5
12_02_0735 - 22636835-22639502,22639755-22640734 27 10.0
09_02_0044 - 3471301-3471471,3471804-3472257,3475905-3476341 27 10.0
>03_02_0415 -
8263459-8263611,8263788-8263919,8264841-8264936,
8265021-8265137,8265352-8265435,8265517-8265577,
8266217-8266266,8266544-8266633,8267539-8267757,
8269207-8269262,8269469-8269546,8269707-8269811,
8269925-8270069,8270310-8270388,8270470-8270537,
8271550-8271626,8272676-8272712,8273107-8273232,
8273770-8273805
Length = 602
Score = 31.5 bits (68), Expect = 0.35
Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 11/142 (7%)
Frame = +2
Query: 74 QSGTHTQRVVSSDHSGVNSSERYIVDNQSGHNKNSATYITKGIHVEDNISKSTQHVTNKS 253
+ G+++ + G + + Y DN +S Y + ++E+++ T+H + S
Sbjct: 272 EDGSYSSDAYTESEDG-DFDKEYSTDNDGPEEDDS--YDSGEDNIEEDMDDDTEHSSGGS 328
Query: 254 LSDSVTKTSIEFQR--------AMHGGDDSTTNVDRSTRGGHHKRTSDLIS---DASSTN 400
D+ KTS+ + A +G D ++ R GH DL + D S +
Sbjct: 329 ECDNNIKTSVSDDKVKSNNSGTASNGNDQGLQPPKKAARTGHGAARKDLSAEEIDYCSDD 388
Query: 401 SVLHRKGLSSNTEAHHSISTTA 466
L K +S T+ I+ A
Sbjct: 389 ETLIEKLENSKTDLQSKITKEA 410
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 31.5 bits (68), Expect = 0.35
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Frame = +2
Query: 2 HEARSDNVNSRITQHSTSNNQDIKQSGTHTQRVVSSDHSGVNSSERYIVDNQSGHNKNSA 181
H R D R +H S++ + K+ ++R SSD S S+ Y ++ + +
Sbjct: 1142 HRKRKDRKRHR--KHGHSDSDEAKRHKRRSKRR-SSDSSDDTDSDEYDSGSEEENRRKKR 1198
Query: 182 TYITKGI-HVEDNISKSTQHVTN-----KSLSDSVTKTSIEFQRAMHGGDDSTTNVDRST 343
++ K H + S ++ + ++ S D + S GDDS + +
Sbjct: 1199 SHRRKHRRHSSRSDSDASDYSSDDEERRSSKKDHSSSRSHRHHHHRSSGDDSGSESEERG 1258
Query: 344 RGGH--HKRTSDLISDASS-TNSVLHRKGLS 427
R H H R+SD DA+S +N+ HR+ S
Sbjct: 1259 RSRHKKHHRSSD--EDATSDSNNHKHRRSRS 1287
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 30.7 bits (66), Expect = 0.61
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Frame = +2
Query: 5 EARSDNVNSRITQHSTSNNQDIKQSGTHTQRVVSSDHSGVNS---SERYIVDNQSGHNK- 172
E++ ++ S+I S+S+NQDIK + S S SE Y+ DNQ +
Sbjct: 1309 ESKELSLQSKILPESSSDNQDIKCEDPSPTPISKSKEVSPQSKILSESYL-DNQDVEREC 1367
Query: 173 NSATYITKGIHVEDNISKSTQHVTNKSLSDSVTKTS---IEFQRAMHGGDDSTTNV 331
S+ IT+ + ++ S K+ S V + S F ++ GDD+ +V
Sbjct: 1368 PSSILITESKELAVDLPGSISLAPEKTASTDVGENSSLAFIFPKSTLAGDDALKSV 1423
>10_08_0460 -
18098187-18098248,18098331-18098399,18098468-18099434,
18100089-18100808,18100942-18101031,18101076-18101138,
18101223-18101366,18101471-18101527,18101606-18101680,
18101757-18101836,18101937-18102050,18102166-18102258,
18102470-18102553,18102812-18102859,18105207-18105337,
18105903-18106135
Length = 1009
Score = 29.9 bits (64), Expect = 1.1
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Frame = +2
Query: 20 NVNSR-ITQHSTSNNQDIKQSGTHTQRVVSSDHSGVNSSERYIVDNQ-SGHNKNSATYIT 193
N NS+ ITQ S N QSGT+ ++ + S + SER +D + + +S T IT
Sbjct: 176 NENSKSITQGSKEGNNKTIQSGTNIHQLQDGERS-LKESERNKIDTKHTEETSSSITQIT 234
Query: 194 KGIHVEDNISKSTQHVTNKSLSDSVTKTS-IEFQRAMHGGDDS-TTNVDRSTRG-GHHKR 364
+ S + H L T + + + MH +S N++ + G G
Sbjct: 235 GIGTTQSPQSPALLHDELTMLKSHTTPVAQLSYTSLMHQVINSPRINIEPNMGGRGLESF 294
Query: 365 TSDLISDASSTNSVL 409
TS L + ++ NS++
Sbjct: 295 TSMLQTPSAYNNSMI 309
>08_01_0378 +
3360215-3360253,3360326-3360437,3362176-3362213,
3363949-3363966,3364629-3364847,3364937-3366727,
3367764-3367827,3367915-3367975,3368685-3368694
Length = 783
Score = 29.9 bits (64), Expect = 1.1
Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 8/143 (5%)
Frame = +2
Query: 8 ARSDNVNSRITQHSTSNNQDIKQSGTHTQRVVSSDHSGVNSS---ERYIVDNQSGHNKNS 178
A +VN + H S ++ + T + VV + +++ + +++Q N
Sbjct: 174 ASFSSVNKSSSNHGASRG--LEPTKTEVKDVVILERDSISNGAGKDAKDINDQEMERLNG 231
Query: 179 ATYITKGIHVEDN-ISKSTQHVTNKSLSDSVTKTSIEFQRAMHGGDD--STTNVDRS-TR 346
+K H +N + S+Q KS S T +A H D T + T
Sbjct: 232 IHISSKPDHSHENCLDTSSQQFKPKSNSVETTYVDWSAAKASHYQMDRNGVTGFQATGTE 291
Query: 347 GGHHKRTSDLISDASST-NSVLH 412
G H +TSD + AS T N +H
Sbjct: 292 GSHPDQTSDQMGGASGTMNQCIH 314
>04_04_1193 +
31634043-31634349,31634685-31634847,31635048-31636622,
31636653-31637541,31639401-31641266
Length = 1599
Score = 29.9 bits (64), Expect = 1.1
Identities = 28/108 (25%), Positives = 40/108 (37%)
Frame = +2
Query: 8 ARSDNVNSRITQHSTSNNQDIKQSGTHTQRVVSSDHSGVNSSERYIVDNQSGHNKNSATY 187
A NS +S + ++ G V +S H N +E Q H A
Sbjct: 164 ASEGGANSFAAGNSVGRKR-MRTEGASADNVAASMHPW-NKTELSNTIQQMTHQLQEAMN 221
Query: 188 ITKGIHVEDNISKSTQHVTNKSLSDSVTKTSIEFQRAMHGGDDSTTNV 331
+ DN S H + + SDS KTS QR M+G D ++
Sbjct: 222 EVMKLRGSDNFVSSNFH--HNTTSDSRLKTSSLLQRKMYGRVDEKNSI 267
>12_02_1167 +
26647293-26648356,26648493-26648577,26649129-26649191,
26649381-26649443,26649987-26650070,26650229-26650783
Length = 637
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 209 EDNISKSTQHVTNKSLSDSVTKTSIEFQRAMHGGDDSTTNVDRSTRGGHHKRTS 370
ED+ K ++ D V S + GD +TT S+ GG KRTS
Sbjct: 473 EDDDEKQEHDAGKEAKDDDVAGVSAANDQPDVDGDGTTTTTTTSSNGGSGKRTS 526
>05_02_0034 + 5856165-5856183,5858845-5859173,5859275-5859277,
5859440-5859517,5859623-5860090,5860378-5860437,
5860442-5860666,5860791-5860952,5861502-5861870,
5861950-5863390,5863598-5863701,5863744-5863779,
5863780-5863977,5864275-5864538
Length = 1251
Score = 28.7 bits (61), Expect = 2.5
Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Frame = +2
Query: 11 RSDNVNSRITQHSTSNNQDIKQSGTHTQR--VVSSDHSGVNSSERYIVDNQSGHNKNSAT 184
+++NV + Q + N +K+ + +SD +G+ + GH K SA
Sbjct: 737 QTNNVCPSVEQRKSENISPLKEPCVRNELSCTTNSDSNGLQYN-----GGLGGH-KGSAP 790
Query: 185 YITKGIHVEDNISKSTQHVTNKSLSDSVTKTSIEFQRAMHGGDDSTTNVDRSTRGGHHKR 364
+ + + +T+ ++ S+S + + + + + S T RS G HH R
Sbjct: 791 GLPVSSSPSFSSNVATRPISTSSVSMKIVQGLVASKSCIQAS--SRTGDSRSLLGEHHNR 848
Query: 365 TSDLISDASSTNSVL 409
+ +I D ++ S L
Sbjct: 849 SPAMIHDGTNMKSSL 863
>05_01_0213 - 1606383-1606816,1607695-1608355
Length = 364
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 290 QRAMH-GGDDSTTNVDRSTRGGHHKRTSDLISDASSTNSVLHRKGLSSNTEAHHSISTT 463
+R +H GGDD G ++ +SS SVLH + SS++ + + +TT
Sbjct: 140 RRKLHYGGDDDDDEAQHPGHGRRRAAATERGMPSSSPVSVLHAQHSSSSSSSSSTTTTT 198
>06_03_0433 - 20718726-20719895
Length = 389
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +2
Query: 239 VTNKSLSDSVTKTSIEFQRAMHGGDDSTTNVDRSTRGGHHKRTSDLISDASSTN---SVL 409
V +K +++ +T E DD N DRS G H ++D ++A+S + +
Sbjct: 54 VVSKPDEENIGETVFEKDNT-DSHDDDIRNTDRSKAGEGHGSSADGNTEANSNDEDGTTN 112
Query: 410 HRKGLSSNTEAHHS 451
H +G S+ E++ S
Sbjct: 113 HSEGEKSDAESNSS 126
>01_05_0525 +
22928295-22928492,22929435-22929584,22929679-22929813,
22929914-22929979,22931704-22931793,22932414-22932495,
22932703-22932908
Length = 308
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 95 RVVSSDHSGVNSSERYIVDNQSGHNKNSATYITKGIHVEDNISKSTQHVTNKSLSDSVTK 274
R + S H+GV + + +S H+KNS Y+ + +ED+ + + S S +K
Sbjct: 158 RSMKSRHAGVTVDQMLEILKRSAHDKNSQDYVKR---IEDD-DDDDEDLVIPGQSSSTSK 213
Query: 275 TSIEFQRAMHGGD--DSTTNVDRSTRGGH 355
+ Q + D T+ D + + G+
Sbjct: 214 MNGSSQSVSNATDVLTKTSGSDNANKEGN 242
>09_04_0512 +
18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 113 HSG-VNSSERYIVDNQSGHNKNSATYITKGIHVEDNISKSTQHVTNKSLSDSVTKTSIEF 289
HSG +NSS++ +S + G VE NIS H T +S + +
Sbjct: 628 HSGKLNSSQKKPKGLTEASGFSSGKNESAGQKVESNISTGVMHTTERSRGFCAMNCTEDL 687
Query: 290 QRAMHGGDDSTTNVDRSTRGGHHKRTSD 373
Q+ G + T+ D + + ++ T+D
Sbjct: 688 QQ--DGTEQETSPFDNAVQINANRCTAD 713
>01_01_0057 -
435295-435731,435866-435914,436041-436437,437807-437906,
438316-438388,439322-439528
Length = 420
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 199 SFCYICRRIFVMPTLVIHNISFAGIYTRV 113
S C++C FV+PT V + S G RV
Sbjct: 242 SLCFVCETRFVVPTAVGEDFSTCGKQQRV 270
>09_06_0056 -
20561645-20561920,20562024-20562611,20562698-20563055,
20563149-20563483,20563593-20563633,20563722-20563932,
20564289-20564348,20564432-20564457,20565066-20565264
Length = 697
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 362 RTSDLISDASSTNSVLHRKGLSSNTEAHHSISTT 463
+T DL++D S+ + + K S N+ A H +S T
Sbjct: 124 KTDDLVNDLSNASLDVDDKVKSENSSAEHELSLT 157
>08_02_1277 + 25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 107 SDHSGVNSSERYIVD--NQSGHNKNSATYITKGIHVEDNISKSTQHVTNKSLSDS 265
SDHS +NSS + +D SG N + +T + + S S+ V + S D+
Sbjct: 1033 SDHSDINSSTNFSIDAVKTSGLNSWTPVPVTNTVRSTHSNSISSTSVPSSSSPDN 1087
>08_02_0648 - 19694538-19696569,19697151-19697998
Length = 959
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 14 SDNVNSRITQHSTSNNQDIKQSGT--HTQRVVSSDHSGVNSSERYIVDNQSGH 166
S+N SRI T+ QD+ +S + H V S H GV+ S+R + GH
Sbjct: 306 SNNNASRIMM--TTRIQDVAKSCSFPHESHVYSMKHLGVDDSKRLFLKRIFGH 356
>06_03_1032 +
27029698-27029785,27030640-27031275,27031739-27031993,
27032451-27032605,27032704-27032783,27032891-27033026,
27033228-27033377,27033474-27033641
Length = 555
Score = 27.5 bits (58), Expect = 5.7
Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Frame = +2
Query: 5 EARSDNVNSRITQHSTSNNQDIKQSGTHTQRVVS----SDHSGV-----NSSERYIVDNQ 157
E ++ + I + N+D SG+ T+ VVS SD S SS D+
Sbjct: 29 EGPGEHQENTIRDSDEAKNEDCSNSGSVTEAVVSSEEPSDRSSTEEPSDRSSTEEPSDSS 88
Query: 158 SGHNKNSATYITKGIHVE--DNISKSTQHVTNKSLSDSVTKTSIEFQRAMHGGDDSTTNV 331
SG + +S + + G E SK+ +++ S + ++ + D +++V
Sbjct: 89 SGGDSSSQSADSDGGSKEAPKMDSKAGNDDSSECTDQSSPRAVLDISVSGSVDSDESSSV 148
Query: 332 DRSTRGGHHKRTSDLIS 382
++ H+ + +LIS
Sbjct: 149 EQPAESNHNTQWRNLIS 165
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +2
Query: 26 NSRITQHSTSNNQDIKQSGTHTQRVVSSDHSGVNSSERYIVDNQSGHNKNSATYITK 196
N+ T+ S+S+ D+K + T T V +HSG+ + ++++A + K
Sbjct: 456 NNTDTEKSSSSAIDVKLAETSTTPTVPQEHSGITEKPSQTSADDVKPSESTAAVVKK 512
>04_04_1324 + 32659752-32661972,32662067-32662761
Length = 971
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Frame = +2
Query: 299 MHGGDD-----STTNVDRSTRGGHHKRTSDLISDASSTN-SVLHRKGLSSNTEAHHSIST 460
+HGG+ S + D GG H+R S +++A + S HR+ S+++A S +
Sbjct: 392 VHGGEHRQLSMSLNDADTEVHGGEHRRLSMSLNEAGTEQPSGEHRQLSVSSSDAGSSTDS 451
Query: 461 TA 466
T+
Sbjct: 452 TS 453
>03_05_1097 +
30393336-30393578,30393661-30393780,30393859-30394017,
30394184-30394225,30394336-30394508,30394600-30394705,
30394795-30394824
Length = 290
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -2
Query: 225 FEILS--STWIPFVIYVAEFLLCPLWLSTIYLSLEFTPE 115
FE+ S S W +YV E C LWLS +++++ TP+
Sbjct: 173 FEMKSTKSHWQDMKLYVRE---CILWLSIVFITILCTPQ 208
>02_05_0933 +
32846658-32846729,32847038-32847133,32847243-32847411,
32847608-32847669,32848364-32849320,32850036-32850119,
32850307-32850595,32850645-32850694
Length = 592
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 155 QSGHNKNSATYITKGIHVEDNISKSTQHVTNKSLSDS 265
+ H KN+ KG+HVE + K Q + +K DS
Sbjct: 477 RKNHQKNTGK---KGVHVETSCEKDVQGLQDKDFCDS 510
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 27.1 bits (57), Expect = 7.5
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Frame = +2
Query: 212 DNISKSTQHVTNKSLSDSVTKTSIEFQRAMHGGDDSTTNVDRSTRGGHHKRTSDLISDAS 391
D K+ +V + + +TK EF+R +D + R H K + +
Sbjct: 286 DPYFKNIANVDREPSAQPITKLEFEFERRRITKEDIRELIYREILEYHPKMLREFLEGTE 345
Query: 392 ST-----NSVLHRKGLSSNTEAHHSISTTAA 469
ST ++V H K + E H++ +TAA
Sbjct: 346 STGFMYPSAVDHFKKQFAYLEEHYAKGSTAA 376
>02_01_0246 +
1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 27.1 bits (57), Expect = 7.5
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = +2
Query: 74 QSGTHTQRVV-SSDHSGVNSSERYIVDNQSGHN-KNSATYITKGIHVEDNISKSTQHVTN 247
++G HT S+D VN++ D +S K + T+ I E NIS S +
Sbjct: 685 EAGFHTSHAAPSNDPVEVNTTACETQDTESAEEIKETEGTKTESIPQESNISVSEESNPE 744
Query: 248 KSLSDSVTKTSIEFQRAMHGGDDSTTNVDRST 343
S++ S T ++ + + S N+D T
Sbjct: 745 DSITASETISNTQELTIAGSIEASEDNIDTKT 776
>12_02_0735 - 22636835-22639502,22639755-22640734
Length = 1215
Score = 26.6 bits (56), Expect = 10.0
Identities = 21/91 (23%), Positives = 41/91 (45%)
Frame = +2
Query: 77 SGTHTQRVVSSDHSGVNSSERYIVDNQSGHNKNSATYITKGIHVEDNISKSTQHVTNKSL 256
S T T +V SG RY+ ++ G SA ++ +H+ ++T V +++
Sbjct: 46 SSTATLQVSPVRRSG---GSRYLGASRDGGADESAEFVHYTVHIPPTPDRATASVASEAE 102
Query: 257 SDSVTKTSIEFQRAMHGGDDSTTNVDRSTRG 349
+ + + QR+ G T ++ +TRG
Sbjct: 103 AAAEAEEVHRPQRSYISGTIFTGGLNCATRG 133
>09_02_0044 - 3471301-3471471,3471804-3472257,3475905-3476341
Length = 353
Score = 26.6 bits (56), Expect = 10.0
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = +2
Query: 83 THTQRVVSSDHSGVNSSERYIVDNQSGHNKNSATYITKGIHVEDNISK--STQHVTNKSL 256
T T +SS+HSG + SE +Q Y+T + E+ + + K L
Sbjct: 95 TATANTISSEHSGTDDSEAQSAPSQDFLCSTQVPYLTLTFNSEEEARAHYNRKFSLKKFL 154
Query: 257 SD--SVTKTSIEFQRAMHGGDDSTTNV 331
++ K +F +HG + ST +
Sbjct: 155 RSHRAIPKKEKDFITMLHGVNLSTGRI 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,242,492
Number of Sequences: 37544
Number of extensions: 241112
Number of successful extensions: 702
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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