Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C01
(462 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6 prot... 198 8e-51
M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6 prot... 198 8e-51
BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6 pr... 198 8e-51
BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6 pr... 198 8e-51
BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6 pr... 198 8e-51
BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6 pr... 198 8e-51
BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6 pr... 198 8e-51
BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6 pr... 198 8e-51
AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6 pr... 198 8e-51
AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6 pr... 198 8e-51
BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein. 197 2e-50
AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6 pr... 197 2e-50
M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein. 196 3e-50
J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein. 192 7e-49
AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein. 131 1e-30
AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 31 2.5
>X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 198 bits (483), Expect = 8e-51
Identities = 104/161 (64%), Positives = 120/161 (74%), Gaps = 9/161 (5%)
Frame = +2
Query: 2 KLNVSYP-NGMSSI*MVDTTPSSMKAYGR*MCNLLATME--------VISGAGGNDKQGF 154
KLN+S+P G + VD Y + M +A V+ +GGNDKQGF
Sbjct: 2 KLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGF 61
Query: 155 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 334
PMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++I
Sbjct: 62 PMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 335 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
PGLTD VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL 162
>M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 198 bits (483), Expect = 8e-51
Identities = 104/161 (64%), Positives = 120/161 (74%), Gaps = 9/161 (5%)
Frame = +2
Query: 2 KLNVSYP-NGMSSI*MVDTTPSSMKAYGR*MCNLLATME--------VISGAGGNDKQGF 154
KLN+S+P G + VD Y + M +A V+ +GGNDKQGF
Sbjct: 2 KLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGF 61
Query: 155 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 334
PMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++I
Sbjct: 62 PMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 335 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
PGLTD VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL 162
>BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 198 bits (483), Expect = 8e-51
Identities = 104/161 (64%), Positives = 120/161 (74%), Gaps = 9/161 (5%)
Frame = +2
Query: 2 KLNVSYP-NGMSSI*MVDTTPSSMKAYGR*MCNLLATME--------VISGAGGNDKQGF 154
KLN+S+P G + VD Y + M +A V+ +GGNDKQGF
Sbjct: 2 KLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGF 61
Query: 155 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 334
PMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++I
Sbjct: 62 PMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 335 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
PGLTD VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL 162
>BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 198 bits (483), Expect = 8e-51
Identities = 104/161 (64%), Positives = 120/161 (74%), Gaps = 9/161 (5%)
Frame = +2
Query: 2 KLNVSYP-NGMSSI*MVDTTPSSMKAYGR*MCNLLATME--------VISGAGGNDKQGF 154
KLN+S+P G + VD Y + M +A V+ +GGNDKQGF
Sbjct: 2 KLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGF 61
Query: 155 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 334
PMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++I
Sbjct: 62 PMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 335 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
PGLTD VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL 162
>BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 198 bits (483), Expect = 8e-51
Identities = 104/161 (64%), Positives = 120/161 (74%), Gaps = 9/161 (5%)
Frame = +2
Query: 2 KLNVSYP-NGMSSI*MVDTTPSSMKAYGR*MCNLLATME--------VISGAGGNDKQGF 154
KLN+S+P G + VD Y + M +A V+ +GGNDKQGF
Sbjct: 2 KLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGF 61
Query: 155 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 334
PMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++I
Sbjct: 62 PMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 335 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
PGLTD VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL 162
>BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 198 bits (483), Expect = 8e-51
Identities = 104/161 (64%), Positives = 120/161 (74%), Gaps = 9/161 (5%)
Frame = +2
Query: 2 KLNVSYP-NGMSSI*MVDTTPSSMKAYGR*MCNLLATME--------VISGAGGNDKQGF 154
KLN+S+P G + VD Y + M +A V+ +GGNDKQGF
Sbjct: 2 KLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGF 61
Query: 155 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 334
PMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++I
Sbjct: 62 PMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 335 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
PGLTD VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL 162
>BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 198 bits (483), Expect = 8e-51
Identities = 104/161 (64%), Positives = 120/161 (74%), Gaps = 9/161 (5%)
Frame = +2
Query: 2 KLNVSYP-NGMSSI*MVDTTPSSMKAYGR*MCNLLATME--------VISGAGGNDKQGF 154
KLN+S+P G + VD Y + M +A V+ +GGNDKQGF
Sbjct: 2 KLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGF 61
Query: 155 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 334
PMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++I
Sbjct: 62 PMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 335 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
PGLTD VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL 162
>BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 198 bits (483), Expect = 8e-51
Identities = 104/161 (64%), Positives = 120/161 (74%), Gaps = 9/161 (5%)
Frame = +2
Query: 2 KLNVSYP-NGMSSI*MVDTTPSSMKAYGR*MCNLLATME--------VISGAGGNDKQGF 154
KLN+S+P G + VD Y + M +A V+ +GGNDKQGF
Sbjct: 2 KLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGF 61
Query: 155 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 334
PMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++I
Sbjct: 62 PMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 335 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
PGLTD VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL 162
>AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 198 bits (483), Expect = 8e-51
Identities = 104/161 (64%), Positives = 120/161 (74%), Gaps = 9/161 (5%)
Frame = +2
Query: 2 KLNVSYP-NGMSSI*MVDTTPSSMKAYGR*MCNLLATME--------VISGAGGNDKQGF 154
KLN+S+P G + VD Y + M +A V+ +GGNDKQGF
Sbjct: 2 KLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGF 61
Query: 155 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 334
PMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++I
Sbjct: 62 PMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 335 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
PGLTD VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL 162
>AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 198 bits (483), Expect = 8e-51
Identities = 104/161 (64%), Positives = 120/161 (74%), Gaps = 9/161 (5%)
Frame = +2
Query: 2 KLNVSYP-NGMSSI*MVDTTPSSMKAYGR*MCNLLATME--------VISGAGGNDKQGF 154
KLN+S+P G + VD Y + M +A V+ +GGNDKQGF
Sbjct: 2 KLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGF 61
Query: 155 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 334
PMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++I
Sbjct: 62 PMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 335 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
PGLTD VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL 162
>BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein.
Length = 247
Score = 197 bits (480), Expect = 2e-50
Identities = 93/114 (81%), Positives = 104/114 (91%)
Frame = +2
Query: 116 VISGAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSV 295
V+ +GGNDKQGFPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSV
Sbjct: 47 VVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSV 106
Query: 296 LALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
L LVIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L
Sbjct: 107 LNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL 160
>AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6
protein.
Length = 218
Score = 197 bits (480), Expect = 2e-50
Identities = 93/114 (81%), Positives = 104/114 (91%)
Frame = +2
Query: 116 VISGAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSV 295
V+ +GGNDKQGFPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSV
Sbjct: 18 VVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSV 77
Query: 296 LALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
L LVIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNL KEDDVR+YVV++ L
Sbjct: 78 LNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL 131
>M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 196 bits (478), Expect = 3e-50
Identities = 103/161 (63%), Positives = 120/161 (74%), Gaps = 9/161 (5%)
Frame = +2
Query: 2 KLNVSYP-NGMSSI*MVDTTPSSMKAYGR*MCNLLATME--------VISGAGGNDKQGF 154
KLN+S+P G + VD + Y + M +A V+ +GGNDKQGF
Sbjct: 2 KLNISFPATGCQKLIEVDDERTLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGF 61
Query: 155 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 334
PMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++I
Sbjct: 62 PMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 335 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
PGLTD VPRRLGPKRAS+IRK FNL KEDDVR+YVV++ L
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKRFNLSKEDDVRQYVVRKPL 162
>J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 192 bits (467), Expect = 7e-49
Identities = 102/161 (63%), Positives = 117/161 (72%), Gaps = 9/161 (5%)
Frame = +2
Query: 2 KLNVSYP-NGMSSI*MVDTTPSSMKAYGR*MCNLLATME--------VISGAGGNDKQGF 154
KLN+S+P G + VD Y + M +A V+ +GGNDK GF
Sbjct: 2 KLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKXGF 61
Query: 155 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEI 334
PMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++I
Sbjct: 62 PMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 335 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLL 457
PGLTD VPRRLGPKRAS+IRKLFNL KEDDVR VV++ L
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRECVVRKPL 162
>AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein.
Length = 79
Score = 131 bits (316), Expect = 1e-30
Identities = 61/73 (83%), Positives = 67/73 (91%)
Frame = +2
Query: 188 VRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRR 367
+RLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD VPRR
Sbjct: 2 IRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRR 61
Query: 368 LGPKRASKIRKLF 406
LGPK AS+IRKLF
Sbjct: 62 LGPKEASRIRKLF 74
>AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated
factor 6 protein.
Length = 916
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1
Query: 375 GPRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPRTDLRFLSPSRR 229
G R S S S SC+ R+ +R+++ R S Q R+ + SP RR
Sbjct: 762 GSYSRSRSRSCSRSSSCSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRR 810
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,875,845
Number of Sequences: 237096
Number of extensions: 1534486
Number of successful extensions: 3003
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3003
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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