Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C01
         (462 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07881-1|AAA28871.1|  248|Drosophila melanogaster ribosomal prot...   199   1e-51
L02075-1|AAB05985.1|  248|Drosophila melanogaster ribosomal prot...   199   1e-51
L02074-4|AAB05982.1|  248|Drosophila melanogaster ribosomal prot...   199   1e-51
L01658-1|AAC34306.1|  248|Drosophila melanogaster ribosomal prot...   199   1e-51
AY058620-1|AAL13849.1|  217|Drosophila melanogaster LD31286p pro...   199   1e-51
AE014298-1080|AAF46288.1|  217|Drosophila melanogaster CG10944-P...   199   1e-51
AE014298-1079|AAN09219.1|  251|Drosophila melanogaster CG10944-P...   199   1e-51
AE014298-1078|AAN09218.1|  248|Drosophila melanogaster CG10944-P...   199   1e-51
L02074-3|AAB05984.1|  200|Drosophila melanogaster protein ( Dros...    95   4e-20
L02074-2|AAB05983.1|  200|Drosophila melanogaster protein ( Dros...    95   4e-20
AE014298-1077|AAS65274.1|  135|Drosophila melanogaster CG33222-P...    60   1e-09
AE014298-1076|AAF46287.3|  135|Drosophila melanogaster CG11386-P...    60   1e-09
BT022735-1|AAY55151.1|  149|Drosophila melanogaster IP07614p pro...    58   6e-09
BT022511-1|AAY54927.1|  147|Drosophila melanogaster IP07914p pro...    58   6e-09
AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p pro...    33   0.25 
AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-P...    33   0.25 
BT024291-1|ABC86353.1|  638|Drosophila melanogaster IP12935p pro...    30   1.7  
AE014298-1809|AAF48200.3|  681|Drosophila melanogaster CG12717-P...    30   1.7  
AE014297-3049|AAN13885.1|  381|Drosophila melanogaster CG31335-P...    29   4.0  
BT001348-1|AAN71103.1|  685|Drosophila melanogaster AT24492p pro...    28   5.3  
AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD1916...    28   5.3  
AE014297-56|AAN13304.3|  685|Drosophila melanogaster CG9776-PB, ...    28   5.3  
AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA, ...    28   5.3  
AY051815-1|AAK93239.1|  899|Drosophila melanogaster LD32258p pro...    27   9.3  
AE014134-1027|AAN10572.1|  899|Drosophila melanogaster CG31643-P...    27   9.3  

>L07881-1|AAA28871.1|  248|Drosophila melanogaster ribosomal protein
           S6 protein.
          Length = 248

 Score =  199 bits (486), Expect = 1e-51
 Identities = 91/111 (81%), Positives = 103/111 (92%)
 Frame = +2

Query: 128 AGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALV 307
           AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV
Sbjct: 53  AGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALV 112

Query: 308 IVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLP 460
           +++KG ++IPGLTD  +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LP
Sbjct: 113 VLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLP 163


>L02075-1|AAB05985.1|  248|Drosophila melanogaster ribosomal protein
           S6 protein.
          Length = 248

 Score =  199 bits (486), Expect = 1e-51
 Identities = 91/111 (81%), Positives = 103/111 (92%)
 Frame = +2

Query: 128 AGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALV 307
           AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV
Sbjct: 53  AGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALV 112

Query: 308 IVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLP 460
           +++KG ++IPGLTD  +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LP
Sbjct: 113 VLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLP 163


>L02074-4|AAB05982.1|  248|Drosophila melanogaster ribosomal protein
           S6 protein.
          Length = 248

 Score =  199 bits (486), Expect = 1e-51
 Identities = 91/111 (81%), Positives = 103/111 (92%)
 Frame = +2

Query: 128 AGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALV 307
           AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV
Sbjct: 53  AGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALV 112

Query: 308 IVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLP 460
           +++KG ++IPGLTD  +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LP
Sbjct: 113 VLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLP 163


>L01658-1|AAC34306.1|  248|Drosophila melanogaster ribosomal protein
           S6 protein.
          Length = 248

 Score =  199 bits (486), Expect = 1e-51
 Identities = 91/111 (81%), Positives = 103/111 (92%)
 Frame = +2

Query: 128 AGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALV 307
           AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV
Sbjct: 53  AGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALV 112

Query: 308 IVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLP 460
           +++KG ++IPGLTD  +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LP
Sbjct: 113 VLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLP 163


>AY058620-1|AAL13849.1|  217|Drosophila melanogaster LD31286p
           protein.
          Length = 217

 Score =  199 bits (486), Expect = 1e-51
 Identities = 91/111 (81%), Positives = 103/111 (92%)
 Frame = +2

Query: 128 AGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALV 307
           AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV
Sbjct: 22  AGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALV 81

Query: 308 IVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLP 460
           +++KG ++IPGLTD  +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LP
Sbjct: 82  VLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLP 132


>AE014298-1080|AAF46288.1|  217|Drosophila melanogaster CG10944-PA,
           isoform A protein.
          Length = 217

 Score =  199 bits (486), Expect = 1e-51
 Identities = 91/111 (81%), Positives = 103/111 (92%)
 Frame = +2

Query: 128 AGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALV 307
           AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV
Sbjct: 22  AGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALV 81

Query: 308 IVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLP 460
           +++KG ++IPGLTD  +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LP
Sbjct: 82  VLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLP 132


>AE014298-1079|AAN09219.1|  251|Drosophila melanogaster CG10944-PC,
           isoform C protein.
          Length = 251

 Score =  199 bits (486), Expect = 1e-51
 Identities = 91/111 (81%), Positives = 103/111 (92%)
 Frame = +2

Query: 128 AGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALV 307
           AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV
Sbjct: 56  AGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALV 115

Query: 308 IVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLP 460
           +++KG ++IPGLTD  +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LP
Sbjct: 116 VLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLP 166


>AE014298-1078|AAN09218.1|  248|Drosophila melanogaster CG10944-PB,
           isoform B protein.
          Length = 248

 Score =  199 bits (486), Expect = 1e-51
 Identities = 91/111 (81%), Positives = 103/111 (92%)
 Frame = +2

Query: 128 AGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALV 307
           AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV
Sbjct: 53  AGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALV 112

Query: 308 IVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLP 460
           +++KG ++IPGLTD  +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LP
Sbjct: 113 VLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLP 163


>L02074-3|AAB05984.1|  200|Drosophila melanogaster protein (
           Drosophila melanogasterribosomal protein S6 gene and two
           potential alternativelyspliced proteins, complete cds.
           ).
          Length = 200

 Score = 95.1 bits (226), Expect = 4e-20
 Identities = 53/100 (53%), Positives = 67/100 (67%)
 Frame = +2

Query: 128 AGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALV 307
           AGGNDKQGFPMKQGVLT+ R+RLL  K HSC+ PR +  RK K+VR   V+AN+S L LV
Sbjct: 53  AGGNDKQGFPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLV 111

Query: 308 IVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDD 427
           +++K             P RLGP R+S I K++ L +EDD
Sbjct: 112 VLKKNPS----------PCRLGPVRSSNISKIYYLCEEDD 141


>L02074-2|AAB05983.1|  200|Drosophila melanogaster protein (
           Drosophila melanogasterribosomal protein S6 gene and two
           potential alternativelyspliced proteins, complete cds.
           ).
          Length = 200

 Score = 95.1 bits (226), Expect = 4e-20
 Identities = 53/100 (53%), Positives = 67/100 (67%)
 Frame = +2

Query: 128 AGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALV 307
           AGGNDKQGFPMKQGVLT+ R+RLL  K HSC+ PR +  RK K+VR   V+AN+S L LV
Sbjct: 53  AGGNDKQGFPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLV 111

Query: 308 IVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDD 427
           +++K             P RLGP R+S I K++ L +EDD
Sbjct: 112 VLKKNPS----------PCRLGPVRSSNISKIYYLCEEDD 141


>AE014298-1077|AAS65274.1|  135|Drosophila melanogaster CG33222-PA
           protein.
          Length = 135

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 37/83 (44%), Positives = 50/83 (60%)
 Frame = +2

Query: 179 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 358
           N R+RLL  K HSC+ PR +  RK K+VR   V+AN+S L LV+++K             
Sbjct: 5   NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53

Query: 359 PRRLGPKRASKIRKLFNLKKEDD 427
           P RLGP R+S I K++ L +EDD
Sbjct: 54  PCRLGPVRSSNISKIYYLCEEDD 76


>AE014298-1076|AAF46287.3|  135|Drosophila melanogaster CG11386-PA
           protein.
          Length = 135

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 37/83 (44%), Positives = 50/83 (60%)
 Frame = +2

Query: 179 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 358
           N R+RLL  K HSC+ PR +  RK K+VR   V+AN+S L LV+++K             
Sbjct: 5   NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53

Query: 359 PRRLGPKRASKIRKLFNLKKEDD 427
           P RLGP R+S I K++ L +EDD
Sbjct: 54  PCRLGPVRSSNISKIYYLCEEDD 76


>BT022735-1|AAY55151.1|  149|Drosophila melanogaster IP07614p
           protein.
          Length = 149

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 36/81 (44%), Positives = 49/81 (60%)
 Frame = +2

Query: 185 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 364
           R+RLL  K HSC+ PR +  RK K+VR   V+AN+S L LV+++K             P 
Sbjct: 21  RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 69

Query: 365 RLGPKRASKIRKLFNLKKEDD 427
           RLGP R+S I K++ L +EDD
Sbjct: 70  RLGPVRSSNISKIYYLCEEDD 90


>BT022511-1|AAY54927.1|  147|Drosophila melanogaster IP07914p
           protein.
          Length = 147

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 36/81 (44%), Positives = 49/81 (60%)
 Frame = +2

Query: 185 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 364
           R+RLL  K HSC+ PR +  RK K+VR   V+AN+S L LV+++K             P 
Sbjct: 19  RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67

Query: 365 RLGPKRASKIRKLFNLKKEDD 427
           RLGP R+S I K++ L +EDD
Sbjct: 68  RLGPVRSSNISKIYYLCEEDD 88


>AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p
           protein.
          Length = 1051

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 29/91 (31%), Positives = 36/91 (39%)
 Frame = -2

Query: 293 LKG*HQQCNHEQTCVSSHRHDVVCSKSGLLTSRDVHGC*SGLPVS*GSPACRYRRHRR*P 114
           L G HQQ NH+Q     H  DV   + G +                 SPA  YRR  R P
Sbjct: 182 LVGSHQQQNHQQP-YPGHVEDVYLKRPGYVFDE--------------SPAPSYRRPTRPP 226

Query: 113 PLSLEDCTFSAHTLS*KMEWYPPFKYLTSRS 21
           P      T +AH +S     YPP  Y   ++
Sbjct: 227 PSLPPPPTTAAHKISYDSHDYPPPSYAAEQT 257


>AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-PA
           protein.
          Length = 1051

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 29/91 (31%), Positives = 36/91 (39%)
 Frame = -2

Query: 293 LKG*HQQCNHEQTCVSSHRHDVVCSKSGLLTSRDVHGC*SGLPVS*GSPACRYRRHRR*P 114
           L G HQQ NH+Q     H  DV   + G +                 SPA  YRR  R P
Sbjct: 182 LVGSHQQQNHQQP-YPGHVEDVYLKRPGYVFDE--------------SPAPSYRRPTRPP 226

Query: 113 PLSLEDCTFSAHTLS*KMEWYPPFKYLTSRS 21
           P      T +AH +S     YPP  Y   ++
Sbjct: 227 PSLPPPPTTAAHKISYDSHDYPPPSYAAEQT 257


>BT024291-1|ABC86353.1|  638|Drosophila melanogaster IP12935p
           protein.
          Length = 638

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 227 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 376
           P    ER R +  R  I+  ++   A+V+V  G +E     DG+  RRL P
Sbjct: 271 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 321


>AE014298-1809|AAF48200.3|  681|Drosophila melanogaster CG12717-PA
           protein.
          Length = 681

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 227 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 376
           P    ER R +  R  I+  ++   A+V+V  G +E     DG+  RRL P
Sbjct: 314 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 364


>AE014297-3049|AAN13885.1|  381|Drosophila melanogaster CG31335-PA
           protein.
          Length = 381

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 183 LLVRTPCFIGKPCLSLPPAPEITSIVARRLHIQR 82
           L+V  PC++    L +   PE+T +V + LHI R
Sbjct: 87  LVVSIPCYLSIIHLKICHGPEVTKLVNQYLHIFR 120


>BT001348-1|AAN71103.1|  685|Drosophila melanogaster AT24492p
           protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +2

Query: 278 DANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLK-KEDD 427
           DA LSV+ L  + K    +  + + EVP++   + + KI KL +L  K DD
Sbjct: 556 DAVLSVIHLQDLAKEGIHLVTINEAEVPKKSHIQTSEKIEKLQDLNGKSDD 606


>AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD19168
            protein.
          Length = 1260

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +2

Query: 278  DANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLK-KEDD 427
            DA LSV+ L  + K    +  + + EVP++   + + KI KL +L  K DD
Sbjct: 1130 DAVLSVIHLQDLAKEGIHLVTINEAEVPKKSHIQTSEKIEKLQDLNGKSDD 1180


>AE014297-56|AAN13304.3|  685|Drosophila melanogaster CG9776-PB,
           isoform B protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +2

Query: 278 DANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLK-KEDD 427
           DA LSV+ L  + K    +  + + EVP++   + + KI KL +L  K DD
Sbjct: 556 DAVLSVIHLQDLAKEGIHLVTINEAEVPKKSHIQTSEKIEKLQDLNGKSDD 606


>AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA,
            isoform A protein.
          Length = 1260

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +2

Query: 278  DANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLK-KEDD 427
            DA LSV+ L  + K    +  + + EVP++   + + KI KL +L  K DD
Sbjct: 1130 DAVLSVIHLQDLAKEGIHLVTINEAEVPKKSHIQTSEKIEKLQDLNGKSDD 1180


>AY051815-1|AAK93239.1|  899|Drosophila melanogaster LD32258p
           protein.
          Length = 899

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 180 LVRTPCFIGKPCLSLPPAPEITSIVARRLHIQRPYAFIE 64
           L+R    + +PC+    + ++ SI    LH Q P A IE
Sbjct: 294 LIREVMLVLRPCIHQMESADLKSICRTFLHHQEPAALIE 332


>AE014134-1027|AAN10572.1|  899|Drosophila melanogaster CG31643-PA
           protein.
          Length = 899

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 180 LVRTPCFIGKPCLSLPPAPEITSIVARRLHIQRPYAFIE 64
           L+R    + +PC+    + ++ SI    LH Q P A IE
Sbjct: 294 LIREVMLVLRPCIHQMESADLKSICRTFLHHQEPAALIE 332


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,062,561
Number of Sequences: 53049
Number of extensions: 484752
Number of successful extensions: 1032
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)