Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B24
         (356 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.16 
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           23   2.6  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   2.6  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   3.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   3.4  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           22   6.0  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           22   7.9  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 67  HHCYHYHPSSDGQRHSA 17
           HH +H+HP    Q+HSA
Sbjct: 185 HHHHHHHPHHSQQQHSA 201


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 78  PRPPITATTTI 46
           PRPP T TTT+
Sbjct: 178 PRPPTTTTTTV 188


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 78  PRPPITATTTI 46
           PRPP T TTT+
Sbjct: 178 PRPPTTTTTTV 188


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 177 PMETSLNLTILSTEFIFEVNYSTCIQM 257
           P+   ++LTI S + I EVN    I M
Sbjct: 20  PLHVGMDLTIASFDAISEVNMDYTITM 46


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 73  PTHHCYHYHPSSDGQRH 23
           P HH  HY P++    H
Sbjct: 141 PAHHPLHYQPAAAAAMH 157


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 145 RSCLDSFDEPRPWKHR 192
           +SCL++   P PWK +
Sbjct: 524 QSCLETATFPAPWKRQ 539


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 64  HCYHYHPSSDGQRHSAE 14
           +C   HPSS  Q H+ +
Sbjct: 294 NCIQQHPSSQQQHHNGK 310


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,526
Number of Sequences: 2352
Number of extensions: 6289
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)