Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B24
(356 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043013-1|AAL05591.1| 1877|Homo sapiens neuron navigator 1 prot... 30 2.4
AL645504-5|CAI17014.1| 1877|Homo sapiens neuron navigator 1 prot... 30 2.4
AL645504-3|CAI17012.1| 754|Homo sapiens neuron navigator 1 prot... 30 2.4
AL645504-2|CAI17011.1| 1483|Homo sapiens neuron navigator 1 prot... 30 2.4
AL645504-1|CAI17010.1| 1830|Homo sapiens neuron navigator 1 prot... 30 2.4
AL512788-1|CAH71925.1| 1830|Homo sapiens neuron navigator 1 prot... 30 2.4
AK022631-1|BAB14142.1| 705|Homo sapiens protein ( Homo sapiens ... 30 2.4
AJ488101-1|CAD32470.1| 1836|Homo sapiens steerin1 protein protein. 30 2.4
AB032977-1|BAA86465.3| 1770|Homo sapiens KIAA1151 protein protein. 30 2.4
BC027985-1|AAH27985.1| 1063|Homo sapiens MAST1 protein protein. 29 3.2
AB023190-1|BAA76817.1| 1583|Homo sapiens KIAA0973 protein protein. 29 3.2
AF117899-1|AAF27280.1| 363|Homo sapiens LDLR-FUT fusion protein... 28 9.8
>AY043013-1|AAL05591.1| 1877|Homo sapiens neuron navigator 1
protein.
Length = 1877
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 138 QKPPAGPRRQDAGGHD**HSPRPPITATTTILAVMGSAT 22
+KPP+G R G P PP T T T++ GSAT
Sbjct: 590 KKPPSGIARPSTSGSFGYKKP-PPATGTATVMQTGGSAT 627
>AL645504-5|CAI17014.1| 1877|Homo sapiens neuron navigator 1
protein.
Length = 1877
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 138 QKPPAGPRRQDAGGHD**HSPRPPITATTTILAVMGSAT 22
+KPP+G R G P PP T T T++ GSAT
Sbjct: 590 KKPPSGIARPSTSGSFGYKKP-PPATGTATVMQTGGSAT 627
>AL645504-3|CAI17012.1| 754|Homo sapiens neuron navigator 1
protein.
Length = 754
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 138 QKPPAGPRRQDAGGHD**HSPRPPITATTTILAVMGSAT 22
+KPP+G R G P PP T T T++ GSAT
Sbjct: 147 KKPPSGIARPSTSGSFGYKKP-PPATGTATVMQTGGSAT 184
>AL645504-2|CAI17011.1| 1483|Homo sapiens neuron navigator 1
protein.
Length = 1483
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 138 QKPPAGPRRQDAGGHD**HSPRPPITATTTILAVMGSAT 22
+KPP+G R G P PP T T T++ GSAT
Sbjct: 199 KKPPSGIARPSTSGSFGYKKP-PPATGTATVMQTGGSAT 236
>AL645504-1|CAI17010.1| 1830|Homo sapiens neuron navigator 1
protein.
Length = 1830
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 138 QKPPAGPRRQDAGGHD**HSPRPPITATTTILAVMGSAT 22
+KPP+G R G P PP T T T++ GSAT
Sbjct: 603 KKPPSGIARPSTSGSFGYKKP-PPATGTATVMQTGGSAT 640
>AL512788-1|CAH71925.1| 1830|Homo sapiens neuron navigator 1
protein.
Length = 1830
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 138 QKPPAGPRRQDAGGHD**HSPRPPITATTTILAVMGSAT 22
+KPP+G R G P PP T T T++ GSAT
Sbjct: 603 KKPPSGIARPSTSGSFGYKKP-PPATGTATVMQTGGSAT 640
>AK022631-1|BAB14142.1| 705|Homo sapiens protein ( Homo sapiens
cDNA FLJ12569 fis, clone NT2RM4000887. ).
Length = 705
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 138 QKPPAGPRRQDAGGHD**HSPRPPITATTTILAVMGSAT 22
+KPP+G R G P PP T T T++ GSAT
Sbjct: 98 KKPPSGIARPSTSGSFGYKKP-PPATGTATVMQTGGSAT 135
>AJ488101-1|CAD32470.1| 1836|Homo sapiens steerin1 protein protein.
Length = 1836
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 138 QKPPAGPRRQDAGGHD**HSPRPPITATTTILAVMGSAT 22
+KPP+G R G P PP T T T++ GSAT
Sbjct: 549 KKPPSGIARPSTSGSFGYKKP-PPATGTATVMQTGGSAT 586
>AB032977-1|BAA86465.3| 1770|Homo sapiens KIAA1151 protein protein.
Length = 1770
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 138 QKPPAGPRRQDAGGHD**HSPRPPITATTTILAVMGSAT 22
+KPP+G R G P PP T T T++ GSAT
Sbjct: 483 KKPPSGIARPSTSGSFGYKKP-PPATGTATVMQTGGSAT 520
>BC027985-1|AAH27985.1| 1063|Homo sapiens MAST1 protein protein.
Length = 1063
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 99 RPRPGDVVRPAASGDALLPR 158
RPRPGD+ P+ GDA PR
Sbjct: 351 RPRPGDLCPPSKDGDASGPR 370
>AB023190-1|BAA76817.1| 1583|Homo sapiens KIAA0973 protein protein.
Length = 1583
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 99 RPRPGDVVRPAASGDALLPR 158
RPRPGD+ P+ GDA PR
Sbjct: 871 RPRPGDLCPPSKDGDASGPR 890
>AF117899-1|AAF27280.1| 363|Homo sapiens LDLR-FUT fusion protein
protein.
Length = 363
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 98 PPASWRRGPAGGFWRRAPAST 160
PP +WRR PA G AP T
Sbjct: 311 PPVTWRRAPAPGAKAMAPGPT 331
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,010,389
Number of Sequences: 237096
Number of extensions: 993542
Number of successful extensions: 2377
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2374
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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