Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B21
         (82 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    19   4.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    19   4.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    19   4.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    19   6.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    18   8.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      18   8.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      18   8.0  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 35  HGDEHFQKNEN 67
           H  +H+Q N+N
Sbjct: 300 HTQQHYQMNQN 310


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 35  HGDEHFQKNEN 67
           H  +H+Q N+N
Sbjct: 248 HTQQHYQMNQN 258


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 35  HGDEHFQKNEN 67
           H  +H+Q N+N
Sbjct: 431 HTQQHYQMNQN 441


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 5   EGSFLRSLCNHGDEHFQ 55
           E S    LC H  E+FQ
Sbjct: 140 EKSVFDFLCRHTVEYFQ 156


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 8   GSFLRSLCNHGDEH 49
           G F +SL N  ++H
Sbjct: 299 GEFYKSLTNDWEDH 312


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 2   HEGSFLRSLCNHGD 43
           H G+ L   C++GD
Sbjct: 119 HPGAALPFFCHNGD 132


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 2  HEGSFLRSLCNHGD 43
          H G+ L   C++GD
Sbjct: 11 HPGAALPFFCHNGD 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,446
Number of Sequences: 336
Number of extensions: 190
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 8
effective length of database: 119,897
effective search space used:  2158146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)