Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B20
         (425 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   2.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   2.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   8.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    20   8.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   8.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   8.7  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 201 LFLRIIIY*VTDKFEYIHQ 257
           LFL  I+  + DKFE I+Q
Sbjct: 201 LFLNDILSDICDKFEQINQ 219


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 201 LFLRIIIY*VTDKFEYIHQ 257
           LFL  I+  + DKFE I+Q
Sbjct: 157 LFLNDILSDICDKFEQINQ 175


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 133 TIVYDDSQQNNN 98
           TI +DD+  NNN
Sbjct: 196 TITFDDAINNNN 207


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 357 ICFVIVFCCGRCVFFIRRTLI 295
           +CF +V     CVFF+   LI
Sbjct: 224 VCFSLVEDTLPCVFFLGSILI 244


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 199 FCFYGS*FIESRINSNTFTKCEHIFDYIDMTSDQSS 306
           +C  G      R   + FT  +  F YID +S+ S+
Sbjct: 534 YCSRGDLQTYLRTAWDKFTNMQQQFAYIDESSNSSN 569


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 419 LLTISALSGSFRSTI 375
           L T+SAL+G+F  TI
Sbjct: 254 LETVSALNGAFLYTI 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,517
Number of Sequences: 336
Number of extensions: 2015
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)