Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B20
(425 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81132-12|CAE17968.1| 326|Caenorhabditis elegans Hypothetical p... 31 0.35
Z81540-8|CAB04407.2| 326|Caenorhabditis elegans Hypothetical pr... 30 0.80
Z96048-6|CAE17841.1| 327|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81132-15|CAE17969.1| 327|Caenorhabditis elegans Hypothetical p... 29 1.8
U38378-3|AAA79750.2| 335|Caenorhabditis elegans Hypothetical pr... 28 2.4
U38378-2|AAR12974.1| 403|Caenorhabditis elegans Hypothetical pr... 28 2.4
AL031634-3|CAA21036.1| 556|Caenorhabditis elegans Hypothetical ... 28 3.2
Z50070-5|CAA90401.2| 270|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z81061-5|CAB02935.4| 695|Caenorhabditis elegans Hypothetical pr... 27 7.4
>Z81132-12|CAE17968.1| 326|Caenorhabditis elegans Hypothetical
protein T26E4.16 protein.
Length = 326
Score = 31.1 bits (67), Expect = 0.35
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = -3
Query: 342 VFCCGRCVFFIRRTLI*SHVYIIKNMFTFGECIR 241
V CC C F RRTL V I + GECIR
Sbjct: 23 VLCCDACKMFFRRTLF---VKNINSCHRLGECIR 53
>Z81540-8|CAB04407.2| 326|Caenorhabditis elegans Hypothetical
protein F46B3.11 protein.
Length = 326
Score = 29.9 bits (64), Expect = 0.80
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 76 IVIRLIISYCFVVNRRKQLYKTRTSF*NSNYKIILKIERSRFCF 207
IV+ SY F +N+R+ N YKII + RS CF
Sbjct: 32 IVVYQFYSYVFKINQRRDKETLLFPITNCFYKIIKALTRSLICF 75
>Z96048-6|CAE17841.1| 327|Caenorhabditis elegans Hypothetical
protein F57A10.6 protein.
Length = 327
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 342 VFCCGRCVFFIRRTLI*SHVYIIKNMFTFGECIR 241
V CCG C F RR L ++ + GECI+
Sbjct: 23 VLCCGACKMFFRRALFVKNIDTCRQK---GECIK 53
>Z81132-15|CAE17969.1| 327|Caenorhabditis elegans Hypothetical
protein F57A10.6 protein.
Length = 327
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 342 VFCCGRCVFFIRRTLI*SHVYIIKNMFTFGECIR 241
V CCG C F RR L ++ + GECI+
Sbjct: 23 VLCCGACKMFFRRALFVKNIDTCRQK---GECIK 53
>U38378-3|AAA79750.2| 335|Caenorhabditis elegans Hypothetical
protein R11F4.2a protein.
Length = 335
Score = 28.3 bits (60), Expect = 2.4
Identities = 20/83 (24%), Positives = 37/83 (44%)
Frame = -3
Query: 276 IKNMFTFGECIRIYP*LNKL*SVKTKAGTFNF*NYFIIRILK*RSRFVQLFTTIHNKTIT 97
I N F +G R Y + + +V NY +++IL+ + R Q+F + + T
Sbjct: 176 IVNTFWYGTVYRFY--VRNIMTVLVPFVLLAILNYKVVKILRMQQRSAQMFRFLSSDHKT 233
Query: 96 NYQSNDNNRFCLSISIVIEIIMN 28
+S C+ S ++ I+N
Sbjct: 234 KIRSATILMVCIVFSYLLANILN 256
>U38378-2|AAR12974.1| 403|Caenorhabditis elegans Hypothetical
protein R11F4.2b protein.
Length = 403
Score = 28.3 bits (60), Expect = 2.4
Identities = 20/83 (24%), Positives = 37/83 (44%)
Frame = -3
Query: 276 IKNMFTFGECIRIYP*LNKL*SVKTKAGTFNF*NYFIIRILK*RSRFVQLFTTIHNKTIT 97
I N F +G R Y + + +V NY +++IL+ + R Q+F + + T
Sbjct: 176 IVNTFWYGTVYRFY--VRNIMTVLVPFVLLAILNYKVVKILRMQQRSAQMFRFLSSDHKT 233
Query: 96 NYQSNDNNRFCLSISIVIEIIMN 28
+S C+ S ++ I+N
Sbjct: 234 KIRSATILMVCIVFSYLLANILN 256
>AL031634-3|CAA21036.1| 556|Caenorhabditis elegans Hypothetical
protein Y32B12C.3 protein.
Length = 556
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 220 FIESRI-NSNTFTKCEHIFDYIDMTSD 297
+++S+ +S+TFTKC +FD D+ D
Sbjct: 468 YLKSKFQSSHTFTKCRIVFDVSDINED 494
>Z50070-5|CAA90401.2| 270|Caenorhabditis elegans Hypothetical
protein F43G6.4 protein.
Length = 270
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 226 ESRINSNTFTKCEHIFDYIDMTSDQSSSDKEHTP 327
E+ NS+ + E + YI +T ++ D+E+TP
Sbjct: 101 EAEWNSHIELEKERLISYITLTKEKRERDRENTP 134
>Z81061-5|CAB02935.4| 695|Caenorhabditis elegans Hypothetical
protein F14H8.6 protein.
Length = 695
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 172 IILKIERSRFCFYGS*FIESRINSNTFTKCEHIFDYIDMTSDQSSS 309
+I + +G F SRIN TKC +FD+ T +++S
Sbjct: 197 VIAVVPAESLHIFGDSFFWSRINR--LTKCYRLFDFSTQTDTRTTS 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,489,660
Number of Sequences: 27780
Number of extensions: 194392
Number of successful extensions: 527
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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