Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B19
(254 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 111 2e-24
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 89 2e-17
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 88 4e-17
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-14
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 73 1e-12
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 71 5e-12
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 66 2e-10
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 64 8e-10
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 63 1e-09
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 60 1e-08
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 57 7e-08
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 57 7e-08
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 54 5e-07
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 54 6e-07
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 51 4e-06
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 51 4e-06
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 50 1e-05
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 48 4e-05
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 47 1e-04
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 47 1e-04
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 47 1e-04
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 44 5e-04
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 44 9e-04
UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putati... 41 0.006
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 40 0.008
UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1; Tetr... 37 0.078
UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26; Archa... 37 0.078
UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic... 35 0.41
UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5; Archae... 35 0.41
UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10; Archa... 35 0.41
UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1; Guill... 33 0.96
UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal ... 33 1.7
UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella pneu... 33 1.7
UniRef50_UPI000069E299 Cluster: Nuclear receptor coactivator 6 (... 32 2.2
UniRef50_Q2UMK5 Cluster: Predicted protein; n=17; Pezizomycotina... 32 2.2
UniRef50_Q9P9G5 Cluster: Ribosomal protein L12; n=9; Archaea|Rep... 32 2.9
UniRef50_A4RXE9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 31 3.9
UniRef50_P10623 Cluster: 50S ribosomal protein L12P; n=7; Archae... 31 3.9
UniRef50_Q9A5N3 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;... 31 6.7
UniRef50_Q2HEL4 Cluster: Predicted protein; n=1; Chaetomium glob... 30 8.9
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 111 bits (268), Expect = 2e-24
Identities = 52/61 (85%), Positives = 59/61 (96%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
M++KAELACVY++LILVDDDVAVTGEKI+ ILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 252 T 254
T
Sbjct: 61 T 61
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/60 (66%), Positives = 51/60 (85%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
MAS +ELAC+YSALIL DD+V VT +KI+A++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 87.8 bits (208), Expect = 4e-17
Identities = 45/66 (68%), Positives = 50/66 (75%)
Frame = +3
Query: 57 RITFKMASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGIN 236
R T ++ A +C YSALIL DDDVAVT EKIS I A VD+EPYWPGLF KALEGIN
Sbjct: 6 RETSQVKITAIASCAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGIN 63
Query: 237 VRDLIT 254
V+DLIT
Sbjct: 64 VKDLIT 69
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 78.2 bits (184), Expect = 3e-14
Identities = 43/52 (82%), Positives = 45/52 (86%)
Frame = +3
Query: 99 VYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLIT 254
VYSALILVDD VAVT EKIS ILKAA +VEPYW LFAKALEGINV+DLIT
Sbjct: 36 VYSALILVDD-VAVTDEKISTILKAA--NVEPYWRALFAKALEGINVKDLIT 84
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 SKAELACVYSALILVDDDVAVTGEKISAILKAAAVD-VEPYWPGLFAKALEGINVRDLI 251
SK+ELACVY+AL+L DDD+ VT +KI+ ILKAA + VE Y P LFA +L G NV+DL+
Sbjct: 2 SKSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLL 60
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 70.9 bits (166), Expect = 5e-12
Identities = 33/58 (56%), Positives = 41/58 (70%)
Frame = +3
Query: 78 SKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
S +ELAC Y+ALIL DD + +T E IS ++K A V+VE YWP LFAK E N+ DLI
Sbjct: 2 STSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLI 59
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 65.7 bits (153), Expect = 2e-10
Identities = 31/59 (52%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = +3
Query: 78 SKAELACVYSALILVDDDVAVTGEKISAILKAAAV-DVEPYWPGLFAKALEGINVRDLI 251
S AELA Y+ALIL D+ + +T +K+ A++ AA V ++EP W LFAKALEG +V+DL+
Sbjct: 2 SAAELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLL 60
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 63.7 bits (148), Expect = 8e-10
Identities = 30/55 (54%), Positives = 37/55 (67%)
Frame = +3
Query: 87 ELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
EL C Y+AL+L D V VT E I I+ AA VEPY+PGLFA+AL NV D++
Sbjct: 16 ELICSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALSTTNVSDIV 70
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 63.3 bits (147), Expect = 1e-09
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISAILKAAAV-DVEPYWPGLFAKALEGINVRDL 248
M + E A Y+ALIL DD +T EK+ +L AA + DVEP W LFAKALEG +V+D+
Sbjct: 1 MPTDPERAVSYAALILADDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDI 60
Query: 249 IT 254
+T
Sbjct: 61 LT 62
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 59.7 bits (138), Expect = 1e-08
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +3
Query: 87 ELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGI 233
+ C+YSA IL +D V V +KI+ +KAA ++VEP+WPGLFAK+L +
Sbjct: 19 KFTCIYSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 57.2 bits (132), Expect = 7e-08
Identities = 26/58 (44%), Positives = 42/58 (72%)
Frame = +3
Query: 81 KAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLIT 254
+ EL CVYS+L+L DD + VT + I ++KAA D++P+ P LFA+AL+G ++ L++
Sbjct: 14 REELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDLGSLLS 71
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 57.2 bits (132), Expect = 7e-08
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +3
Query: 84 AELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
+E AC Y+ALIL +D+ + K++ I+KAA + VEP W +F KAL+G V DL+
Sbjct: 17 SEAACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLL 72
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 54.4 bits (125), Expect = 5e-07
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +3
Query: 174 AAVDVEPYWPGLFAKALEGINVRDLIT 254
A VD+EPYWP LFAKALEGINV+DLIT
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLIT 32
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 54.0 bits (124), Expect = 6e-07
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +3
Query: 87 ELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRD 245
E A Y+ALIL D +V +T EK+ A++ A V+VE W LFAKALEG ++++
Sbjct: 4 ESALSYAALILADAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKE 56
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 51.2 bits (117), Expect = 4e-06
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +3
Query: 81 KAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLIT 254
K EL C Y+ALIL ++ +++T E I ++K + V PY P LF KAL+G ++ L++
Sbjct: 14 KQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDIEGLLS 71
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 51.2 bits (117), Expect = 4e-06
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +3
Query: 87 ELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLIT 254
E ACV +A+IL D++ T + +I AA V V+ W LFA LEG NV++L+T
Sbjct: 5 ETACVLAAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLT 60
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +3
Query: 84 AELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
AELACVY+ALIL D + + + ++ ++ A+ + ++ +W L+A + NV DLI
Sbjct: 3 AELACVYAALILNDGEKEINADSLAKVVAASGLKLDQFWVNLYADYFKKANVADLI 58
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 48.0 bits (109), Expect = 4e-05
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = +3
Query: 81 KAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEG 230
K ELA +Y +IL + +T E I+ +L A+ ++V PYWP +FA+ ++G
Sbjct: 119 KQELAIMYCGMILNEVKADITEENINKLLSASKIEVAPYWPKMFAEIVKG 168
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 46.8 bits (106), Expect = 1e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +3
Query: 87 ELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
ELA +AL++ + +T E I+ +L A + VE +WP + AKAL N+ DLI
Sbjct: 9 ELAVALAALLIHEAGKEITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLI 63
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 46.8 bits (106), Expect = 1e-04
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +3
Query: 78 SKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
S LAC Y+AL+L D + + E I+A +KAA V++ P P +FA+ LE +V L+
Sbjct: 2 SAETLACTYAALMLSDAGLPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLM 59
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 46.8 bits (106), Expect = 1e-04
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +3
Query: 90 LACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
LAC Y+AL+L D + + E I+A +KAA V V P P +FA+ LE +V L+
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVSVRPTMPIIFARFLEKKSVEALM 59
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 44.4 bits (100), Expect = 5e-04
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
M+SK +LAC Y+ALIL D + + + KAA VDV FA L+ +++ D++
Sbjct: 1 MSSKQQLACTYAALILADSG-KTDMDSLLKVTKAAGVDVSKGMASAFASILKNVDINDVL 59
Query: 252 T 254
+
Sbjct: 60 S 60
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 43.6 bits (98), Expect = 9e-04
Identities = 17/51 (33%), Positives = 34/51 (66%)
Frame = +3
Query: 102 YSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLIT 254
++A IL D + +T + + I KAA +V+ W ++AKALEG +++++++
Sbjct: 8 FAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILS 58
>UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P1, putative - Trichomonas vaginalis G3
Length = 44
Score = 40.7 bits (91), Expect = 0.006
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 87 ELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYW 200
ELACVY+ALIL D D +T + + I+ A+ + + +W
Sbjct: 4 ELACVYAALILHDGDKEITADALQKIIDASGLQTDKFW 41
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 40.3 bits (90), Expect = 0.008
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +3
Query: 84 AELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
A+LAC Y+ALIL + I A+ KAA V+V FA AL +NV +++
Sbjct: 4 AQLACTYAALILSASG-KTDADSICAVTKAAGVEVSHGMAAAFANALAAVNVNEVL 58
>UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 271
Score = 37.1 bits (82), Expect = 0.078
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISAIL-KAAAVDVEPYWPGLF 212
M+ + AC Y+ L+L DD A+T + I+ +L KA +VE Y P L+
Sbjct: 1 MSLLSHQACTYAVLLLSDDGQAITVDNINKVLTKAKVQNVEKYLPKLY 48
>UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26;
Archaea|Rep: 50S ribosomal protein L12P - Archaeoglobus
fulgidus
Length = 106
Score = 37.1 bits (82), Expect = 0.078
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 99 VYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
VY+AL+L +T + + A+L+AA V+V+ ALEG+N+ + I
Sbjct: 4 VYAALLLHSAGKEITEDNVKAVLEAAGVEVDEARVKALVAALEGVNIDEAI 54
>UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4 - Mus musculus
Length = 88
Score = 34.7 bits (76), Expect = 0.41
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDD 131
MAS +ELAC+YSALIL +DD
Sbjct: 1 MASASELACIYSALILHEDD 20
>UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5;
Archaea|Rep: 50S ribosomal protein L12P - Pyrococcus
horikoshii
Length = 108
Score = 34.7 bits (76), Expect = 0.41
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 99 VYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
VY+AL+L + E + A+L+AA V+ E ALEG+N+ ++I
Sbjct: 4 VYAALLLHSVGKEINEENLKAVLQAAGVEPEEARIKALVAALEGVNIDEVI 54
>UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10;
Archaea|Rep: 50S ribosomal protein L12P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 115
Score = 34.7 bits (76), Expect = 0.41
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 99 VYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
VY+ALIL + D + + ++ +L AA VDVE ALE +++ + +
Sbjct: 4 VYAALILNEADEEINEDNLTDVLDAAGVDVEESRVKALVAALEDVDIEEAV 54
>UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1;
Guillardia theta|Rep: Acidic ribosomal protein P1 -
Guillardia theta (Cryptomonas phi)
Length = 104
Score = 33.5 bits (73), Expect = 0.96
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +3
Query: 90 LACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRD 245
++C+ S LIL ++ + +T + IS +LK + +VE Y+ F + ++ ++
Sbjct: 10 ISCILSILILKENKIKITKDLISLVLKTSNNNVEDYFLSYFERISASLDEKE 61
>UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal
protein P1; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein P1 - Equus caballus
Length = 125
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 90 LACVYSALILVDDDVAVT 143
LAC+YSALIL DD+V VT
Sbjct: 43 LACIYSALILHDDEVTVT 60
>UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella
pneumophila|Rep: Expressed protein - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 509
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/50 (24%), Positives = 29/50 (58%)
Frame = +3
Query: 51 LARITFKMASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYW 200
+ + T + S +L Y +L + ++TG+++ + ++A +++EPYW
Sbjct: 377 IVKCTGYLNSSPKLEFCYKTQLLKLETCSITGKELQSAVQATLINLEPYW 426
>UniRef50_UPI000069E299 Cluster: Nuclear receptor coactivator 6
(Amplified in breast cancer protein 3) (Cancer-amplified
transcriptional coactivator ASC-2) (Activating signal
cointegrator 2) (ASC-2) (Peroxisome
proliferator-activated receptor-interacting protein)
(PPAR-interacting protei; n=1; Xenopus tropicalis|Rep:
Nuclear receptor coactivator 6 (Amplified in breast
cancer protein 3) (Cancer-amplified transcriptional
coactivator ASC-2) (Activating signal cointegrator 2)
(ASC-2) (Peroxisome proliferator-activated
receptor-interacting protein) (PPAR-interacting protei -
Xenopus tropicalis
Length = 1685
Score = 32.3 bits (70), Expect = 2.2
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = -2
Query: 232 MPSKAFANRPGQYGSTSTAAAFSMAEIF---SPVTATSSSTRIRAE*TQANSAFDAILNV 62
+PS A RP S S++ + S +F +P+T +S++T Q S ++NV
Sbjct: 1434 LPSSAM-KRPAGQTSVSSSVSQSQITVFVTSNPITTSSTTTGPMTSHVQQQSLMPTVVNV 1492
Query: 61 IRASRQKALAQGEQA 17
+ +++G+QA
Sbjct: 1493 QNMGNKVIVSEGQQA 1507
>UniRef50_Q2UMK5 Cluster: Predicted protein; n=17;
Pezizomycotina|Rep: Predicted protein - Aspergillus
oryzae
Length = 827
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -2
Query: 235 LMPSKAFANRPGQYGSTSTAAAFSMAEIFSPVTATSSSTRIRAE*TQANSAFDAILNVIR 56
L+P+ FA G G + + AF++ EIF + + A ++ ++ D L++ R
Sbjct: 281 LLPADIFALFIGHLGPSMRSLAFTLKEIFKEIPFRPAPDYKVAINSRFRTSLDRALDLYR 340
Query: 55 ASRQKAL 35
SR++AL
Sbjct: 341 GSREEAL 347
>UniRef50_Q9P9G5 Cluster: Ribosomal protein L12; n=9; Archaea|Rep:
Ribosomal protein L12 - Methanococcoides burtonii
Length = 100
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 99 VYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRD 245
+Y+AL+L + +T E +SA+L AA +V ALE +++ +
Sbjct: 4 IYAALLLHNAGKDITEESVSAVLSAAGTEVNESRAKALVAALEDVDIEE 52
>UniRef50_A4RXE9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 1803
Score = 31.5 bits (68), Expect = 3.9
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -2
Query: 226 SKAFANRPGQYGSTSTAAAFSMAEIFSPVTATSSSTRIRAE*TQANSAFDA 74
+ A + G +GSTS AAA + A +F T+TSS + A A+SAF A
Sbjct: 1446 NSASSGGAGAFGSTSPAAAAASAPVFGASTSTSSQS---APAFGASSAFGA 1493
>UniRef50_P10623 Cluster: 50S ribosomal protein L12P; n=7;
Archaea|Rep: 50S ribosomal protein L12P - Methanococcus
vannielii
Length = 99
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 99 VYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
+Y+AL+L + VT E + A+L A ++ ALEG+++ + I
Sbjct: 4 IYAALLLNSANKEVTEEAVKAVLVAGGIEANDARVKALVAALEGVDIAEAI 54
>UniRef50_Q9A5N3 Cluster: Putative uncharacterized protein; n=1;
Caulobacter vibrioides|Rep: Putative uncharacterized
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 524
Score = 31.1 bits (67), Expect = 5.1
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -2
Query: 190 STSTAAAFSMAEIFSPVTATSSSTRIRAE*TQANSAFDAILNVIRASRQKALAQG 26
S +TAAAFS A SPV+A + T TQ NS D +RA Q +A G
Sbjct: 311 SNNTAAAFSTALASSPVSAPPAFTNPLTGATQTNSLADQ----LRAVAQTIVAHG 361
>UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;
n=16; Burkholderiaceae|Rep: Transcriptional regulator,
AraC family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 352
Score = 30.7 bits (66), Expect = 6.7
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 114 ILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEG 230
+L + VT E+ S + + A+D++ PG+F++ L G
Sbjct: 58 LLGEPHARVTEEQFSTLYRTLAIDLDDEMPGIFSRPLRG 96
>UniRef50_Q2HEL4 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 635
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 160 AEIFSPVTATSSSTRIRAE*TQANSAFD-AILNVIRASR 47
A +F P+T+TSSST ++ + T S D ILN + SR
Sbjct: 168 APVFDPLTSTSSSTTLQVDSTTDRSRTDWQILNSVILSR 206
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,276,399
Number of Sequences: 1657284
Number of extensions: 3770801
Number of successful extensions: 10378
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 10005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10367
length of database: 575,637,011
effective HSP length: 62
effective length of database: 472,885,403
effective search space used: 10403478866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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