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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B19
         (254 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ...   111   2e-24
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;...    89   2e-17
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ...    88   4e-17
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ...    78   3e-14
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j...    73   1e-12
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A...    71   5e-12
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ...    66   2e-10
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer...    64   8e-10
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ...    63   1e-09
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;...    60   1e-08
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati...    57   7e-08
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh...    57   7e-08
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ...    54   5e-07
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11...    54   6e-07
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa...    51   4e-06
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam...    51   4e-06
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric...    50   1e-05
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ...    48   4e-05
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;...    47   1e-04
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati...    47   1e-04
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L...    47   1e-04
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E...    44   5e-04
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n...    44   9e-04
UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putati...    41   0.006
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;...    40   0.008
UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1; Tetr...    37   0.078
UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26; Archa...    37   0.078
UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic...    35   0.41 
UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5; Archae...    35   0.41 
UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10; Archa...    35   0.41 
UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1; Guill...    33   0.96 
UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal ...    33   1.7  
UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella pneu...    33   1.7  
UniRef50_UPI000069E299 Cluster: Nuclear receptor coactivator 6 (...    32   2.2  
UniRef50_Q2UMK5 Cluster: Predicted protein; n=17; Pezizomycotina...    32   2.2  
UniRef50_Q9P9G5 Cluster: Ribosomal protein L12; n=9; Archaea|Rep...    32   2.9  
UniRef50_A4RXE9 Cluster: Predicted protein; n=3; Ostreococcus|Re...    31   3.9  
UniRef50_P10623 Cluster: 50S ribosomal protein L12P; n=7; Archae...    31   3.9  
UniRef50_Q9A5N3 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  
UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;...    31   6.7  
UniRef50_Q2HEL4 Cluster: Predicted protein; n=1; Chaetomium glob...    30   8.9  

>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
           Eukaryota|Rep: 60S acidic ribosomal protein P1 -
           Drosophila melanogaster (Fruit fly)
          Length = 112

 Score =  111 bits (268), Expect = 2e-24
 Identities = 52/61 (85%), Positives = 59/61 (96%)
 Frame = +3

Query: 72  MASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           M++KAELACVY++LILVDDDVAVTGEKI+ ILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1   MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60

Query: 252 T 254
           T
Sbjct: 61  T 61


>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
           Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
           sapiens (Human)
          Length = 114

 Score = 89.0 bits (211), Expect = 2e-17
 Identities = 40/60 (66%), Positives = 51/60 (85%)
 Frame = +3

Query: 72  MASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           MAS +ELAC+YSALIL DD+V VT +KI+A++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60


>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
           n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
           putative - Aedes aegypti (Yellowfever mosquito)
          Length = 106

 Score = 87.8 bits (208), Expect = 4e-17
 Identities = 45/66 (68%), Positives = 50/66 (75%)
 Frame = +3

Query: 57  RITFKMASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGIN 236
           R T ++   A  +C YSALIL DDDVAVT EKIS I   A VD+EPYWPGLF KALEGIN
Sbjct: 6   RETSQVKITAIASCAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGIN 63

Query: 237 VRDLIT 254
           V+DLIT
Sbjct: 64  VKDLIT 69


>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 88

 Score = 78.2 bits (184), Expect = 3e-14
 Identities = 43/52 (82%), Positives = 45/52 (86%)
 Frame = +3

Query: 99  VYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLIT 254
           VYSALILVDD VAVT EKIS ILKAA  +VEPYW  LFAKALEGINV+DLIT
Sbjct: 36  VYSALILVDD-VAVTDEKISTILKAA--NVEPYWRALFAKALEGINVKDLIT 84


>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09468 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 116

 Score = 73.3 bits (172), Expect = 1e-12
 Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
 Frame = +3

Query: 78  SKAELACVYSALILVDDDVAVTGEKISAILKAAAVD-VEPYWPGLFAKALEGINVRDLI 251
           SK+ELACVY+AL+L DDD+ VT +KI+ ILKAA +  VE Y P LFA +L G NV+DL+
Sbjct: 2   SKSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLL 60


>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
           Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
           P1 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 111

 Score = 70.9 bits (166), Expect = 5e-12
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = +3

Query: 78  SKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           S +ELAC Y+ALIL DD + +T E IS ++K A V+VE YWP LFAK  E  N+ DLI
Sbjct: 2   STSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLI 59


>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
           Dikarya|Rep: 60S acidic ribosomal protein P1 -
           Cladosporium herbarum (Davidiella tassiana)
          Length = 110

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 31/59 (52%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
 Frame = +3

Query: 78  SKAELACVYSALILVDDDVAVTGEKISAILKAAAV-DVEPYWPGLFAKALEGINVRDLI 251
           S AELA  Y+ALIL D+ + +T +K+ A++ AA V ++EP W  LFAKALEG +V+DL+
Sbjct: 2   SAAELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLL 60


>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
           Eimeriorina|Rep: Acidic ribosomal protein P1 -
           Cryptosporidium hominis
          Length = 124

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/55 (54%), Positives = 37/55 (67%)
 Frame = +3

Query: 87  ELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           EL C Y+AL+L D  V VT E I  I+ AA   VEPY+PGLFA+AL   NV D++
Sbjct: 16  ELICSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALSTTNVSDIV 70


>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 114

 Score = 63.3 bits (147), Expect = 1e-09
 Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
 Frame = +3

Query: 72  MASKAELACVYSALILVDDDVAVTGEKISAILKAAAV-DVEPYWPGLFAKALEGINVRDL 248
           M +  E A  Y+ALIL DD   +T EK+  +L AA + DVEP W  LFAKALEG +V+D+
Sbjct: 1   MPTDPERAVSYAALILADDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDI 60

Query: 249 IT 254
           +T
Sbjct: 61  LT 62


>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 103

 Score = 59.7 bits (138), Expect = 1e-08
 Identities = 25/49 (51%), Positives = 36/49 (73%)
 Frame = +3

Query: 87  ELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGI 233
           +  C+YSA IL +D V V  +KI+  +KAA ++VEP+WPGLFAK+L  +
Sbjct: 19  KFTCIYSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67


>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
           n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
           putative - Theileria parva
          Length = 117

 Score = 57.2 bits (132), Expect = 7e-08
 Identities = 26/58 (44%), Positives = 42/58 (72%)
 Frame = +3

Query: 81  KAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLIT 254
           + EL CVYS+L+L DD + VT + I  ++KAA  D++P+ P LFA+AL+G ++  L++
Sbjct: 14  REELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDLGSLLS 71


>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
           genome shotgun sequence; n=8; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_44,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 122

 Score = 57.2 bits (132), Expect = 7e-08
 Identities = 26/56 (46%), Positives = 38/56 (67%)
 Frame = +3

Query: 84  AELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           +E AC Y+ALIL +D+  +   K++ I+KAA + VEP W  +F KAL+G  V DL+
Sbjct: 17  SEAACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLL 72


>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
           n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
           putative - Aedes aegypti (Yellowfever mosquito)
          Length = 88

 Score = 54.4 bits (125), Expect = 5e-07
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +3

Query: 174 AAVDVEPYWPGLFAKALEGINVRDLIT 254
           A VD+EPYWP LFAKALEGINV+DLIT
Sbjct: 6   ANVDIEPYWPALFAKALEGINVKDLIT 32


>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
           Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
           Candida albicans (Yeast)
          Length = 106

 Score = 54.0 bits (124), Expect = 6e-07
 Identities = 26/53 (49%), Positives = 37/53 (69%)
 Frame = +3

Query: 87  ELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRD 245
           E A  Y+ALIL D +V +T EK+ A++  A V+VE  W  LFAKALEG ++++
Sbjct: 4   ESALSYAALILADAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKE 56


>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
           n=5; Plasmodium|Rep: Acidic ribosomal protein
           P1-hydromedusa - Plasmodium yoelii yoelii
          Length = 119

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 24/58 (41%), Positives = 38/58 (65%)
 Frame = +3

Query: 81  KAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLIT 254
           K EL C Y+ALIL ++ +++T E I  ++K +   V PY P LF KAL+G ++  L++
Sbjct: 14  KQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDIEGLLS 71


>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
           lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
           lamblia ATCC 50803
          Length = 118

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = +3

Query: 87  ELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLIT 254
           E ACV +A+IL D++   T   + +I  AA V V+  W  LFA  LEG NV++L+T
Sbjct: 5   ETACVLAAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLT 60


>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
           Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
           protein - Trichomonas vaginalis G3
          Length = 104

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 21/56 (37%), Positives = 36/56 (64%)
 Frame = +3

Query: 84  AELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           AELACVY+ALIL D +  +  + ++ ++ A+ + ++ +W  L+A   +  NV DLI
Sbjct: 3   AELACVYAALILNDGEKEINADSLAKVVAASGLKLDQFWVNLYADYFKKANVADLI 58


>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
           n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
           protein P1 fusion - Bigelowiella natans (Pedinomonas
           minutissima) (Chlorarachnion sp.(strain CCMP 621))
          Length = 221

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 20/50 (40%), Positives = 33/50 (66%)
 Frame = +3

Query: 81  KAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEG 230
           K ELA +Y  +IL +    +T E I+ +L A+ ++V PYWP +FA+ ++G
Sbjct: 119 KQELAIMYCGMILNEVKADITEENINKLLSASKIEVAPYWPKMFAEIVKG 168


>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
           n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
           ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
          Length = 106

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 22/55 (40%), Positives = 33/55 (60%)
 Frame = +3

Query: 87  ELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           ELA   +AL++ +    +T E I+ +L  A + VE +WP + AKAL   N+ DLI
Sbjct: 9   ELAVALAALLIHEAGKEITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLI 63


>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
           n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
           P2, putative - Leishmania major
          Length = 111

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 24/58 (41%), Positives = 36/58 (62%)
 Frame = +3

Query: 78  SKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           S   LAC Y+AL+L D  +  + E I+A +KAA V++ P  P +FA+ LE  +V  L+
Sbjct: 2   SAETLACTYAALMLSDAGLPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLM 59


>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
           Leishmania|Rep: 60S acidic ribosomal protein P1 -
           Leishmania peruviana
          Length = 107

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 24/54 (44%), Positives = 34/54 (62%)
 Frame = +3

Query: 90  LACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           LAC Y+AL+L D  +  + E I+A +KAA V V P  P +FA+ LE  +V  L+
Sbjct: 6   LACTYAALMLSDAGLPTSAENIAAAVKAAGVSVRPTMPIIFARFLEKKSVEALM 59


>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
           Eukaryota|Rep: 60S acidic ribosomal protein P1 -
           Trypanosoma cruzi
          Length = 109

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 22/61 (36%), Positives = 35/61 (57%)
 Frame = +3

Query: 72  MASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           M+SK +LAC Y+ALIL D       + +  + KAA VDV       FA  L+ +++ D++
Sbjct: 1   MSSKQQLACTYAALILADSG-KTDMDSLLKVTKAAGVDVSKGMASAFASILKNVDINDVL 59

Query: 252 T 254
           +
Sbjct: 60  S 60


>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
           n=21; Ascomycota|Rep: 60S acidic ribosomal protein
           P1-beta - Saccharomyces cerevisiae (Baker's yeast)
          Length = 106

 Score = 43.6 bits (98), Expect = 9e-04
 Identities = 17/51 (33%), Positives = 34/51 (66%)
 Frame = +3

Query: 102 YSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLIT 254
           ++A IL D  + +T + +  I KAA  +V+  W  ++AKALEG +++++++
Sbjct: 8   FAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILS 58


>UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putative;
           n=1; Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
           protein P1, putative - Trichomonas vaginalis G3
          Length = 44

 Score = 40.7 bits (91), Expect = 0.006
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +3

Query: 87  ELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYW 200
           ELACVY+ALIL D D  +T + +  I+ A+ +  + +W
Sbjct: 4   ELACVYAALILHDGDKEITADALQKIIDASGLQTDKFW 41


>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
           n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
           putative - Leishmania major
          Length = 108

 Score = 40.3 bits (90), Expect = 0.008
 Identities = 22/56 (39%), Positives = 31/56 (55%)
 Frame = +3

Query: 84  AELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           A+LAC Y+ALIL         + I A+ KAA V+V       FA AL  +NV +++
Sbjct: 4   AQLACTYAALILSASG-KTDADSICAVTKAAGVEVSHGMAAAFANALAAVNVNEVL 58


>UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1;
           Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
           protein - Tetrahymena thermophila SB210
          Length = 271

 Score = 37.1 bits (82), Expect = 0.078
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = +3

Query: 72  MASKAELACVYSALILVDDDVAVTGEKISAIL-KAAAVDVEPYWPGLF 212
           M+  +  AC Y+ L+L DD  A+T + I+ +L KA   +VE Y P L+
Sbjct: 1   MSLLSHQACTYAVLLLSDDGQAITVDNINKVLTKAKVQNVEKYLPKLY 48


>UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26;
           Archaea|Rep: 50S ribosomal protein L12P - Archaeoglobus
           fulgidus
          Length = 106

 Score = 37.1 bits (82), Expect = 0.078
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = +3

Query: 99  VYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           VY+AL+L      +T + + A+L+AA V+V+         ALEG+N+ + I
Sbjct: 4   VYAALLLHSAGKEITEDNVKAVLEAAGVEVDEARVKALVAALEGVNIDEAI 54


>UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic
           ribosomal protein P1 isoform 4; n=3;
           Euarchontoglires|Rep: PREDICTED: similar to 60S acidic
           ribosomal protein P1 isoform 4 - Mus musculus
          Length = 88

 Score = 34.7 bits (76), Expect = 0.41
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +3

Query: 72  MASKAELACVYSALILVDDD 131
           MAS +ELAC+YSALIL +DD
Sbjct: 1   MASASELACIYSALILHEDD 20


>UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5;
           Archaea|Rep: 50S ribosomal protein L12P - Pyrococcus
           horikoshii
          Length = 108

 Score = 34.7 bits (76), Expect = 0.41
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = +3

Query: 99  VYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           VY+AL+L      +  E + A+L+AA V+ E         ALEG+N+ ++I
Sbjct: 4   VYAALLLHSVGKEINEENLKAVLQAAGVEPEEARIKALVAALEGVNIDEVI 54


>UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10;
           Archaea|Rep: 50S ribosomal protein L12P - Haloarcula
           marismortui (Halobacterium marismortui)
          Length = 115

 Score = 34.7 bits (76), Expect = 0.41
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +3

Query: 99  VYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           VY+ALIL + D  +  + ++ +L AA VDVE         ALE +++ + +
Sbjct: 4   VYAALILNEADEEINEDNLTDVLDAAGVDVEESRVKALVAALEDVDIEEAV 54


>UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1;
           Guillardia theta|Rep: Acidic ribosomal protein P1 -
           Guillardia theta (Cryptomonas phi)
          Length = 104

 Score = 33.5 bits (73), Expect = 0.96
 Identities = 14/52 (26%), Positives = 31/52 (59%)
 Frame = +3

Query: 90  LACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRD 245
           ++C+ S LIL ++ + +T + IS +LK +  +VE Y+   F +    ++ ++
Sbjct: 10  ISCILSILILKENKIKITKDLISLVLKTSNNNVEDYFLSYFERISASLDEKE 61


>UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal
           protein P1; n=3; Eutheria|Rep: PREDICTED: similar to
           ribosomal protein P1 - Equus caballus
          Length = 125

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 90  LACVYSALILVDDDVAVT 143
           LAC+YSALIL DD+V VT
Sbjct: 43  LACIYSALILHDDEVTVT 60


>UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella
           pneumophila|Rep: Expressed protein - Legionella
           pneumophila subsp. pneumophila (strain Philadelphia 1
           /ATCC 33152 / DSM 7513)
          Length = 509

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 12/50 (24%), Positives = 29/50 (58%)
 Frame = +3

Query: 51  LARITFKMASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYW 200
           + + T  + S  +L   Y   +L  +  ++TG+++ + ++A  +++EPYW
Sbjct: 377 IVKCTGYLNSSPKLEFCYKTQLLKLETCSITGKELQSAVQATLINLEPYW 426


>UniRef50_UPI000069E299 Cluster: Nuclear receptor coactivator 6
            (Amplified in breast cancer protein 3) (Cancer-amplified
            transcriptional coactivator ASC-2) (Activating signal
            cointegrator 2) (ASC-2) (Peroxisome
            proliferator-activated receptor-interacting protein)
            (PPAR-interacting protei; n=1; Xenopus tropicalis|Rep:
            Nuclear receptor coactivator 6 (Amplified in breast
            cancer protein 3) (Cancer-amplified transcriptional
            coactivator ASC-2) (Activating signal cointegrator 2)
            (ASC-2) (Peroxisome proliferator-activated
            receptor-interacting protein) (PPAR-interacting protei -
            Xenopus tropicalis
          Length = 1685

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = -2

Query: 232  MPSKAFANRPGQYGSTSTAAAFSMAEIF---SPVTATSSSTRIRAE*TQANSAFDAILNV 62
            +PS A   RP    S S++ + S   +F   +P+T +S++T       Q  S    ++NV
Sbjct: 1434 LPSSAM-KRPAGQTSVSSSVSQSQITVFVTSNPITTSSTTTGPMTSHVQQQSLMPTVVNV 1492

Query: 61   IRASRQKALAQGEQA 17
                 +  +++G+QA
Sbjct: 1493 QNMGNKVIVSEGQQA 1507


>UniRef50_Q2UMK5 Cluster: Predicted protein; n=17;
           Pezizomycotina|Rep: Predicted protein - Aspergillus
           oryzae
          Length = 827

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 19/67 (28%), Positives = 35/67 (52%)
 Frame = -2

Query: 235 LMPSKAFANRPGQYGSTSTAAAFSMAEIFSPVTATSSSTRIRAE*TQANSAFDAILNVIR 56
           L+P+  FA   G  G +  + AF++ EIF  +    +     A  ++  ++ D  L++ R
Sbjct: 281 LLPADIFALFIGHLGPSMRSLAFTLKEIFKEIPFRPAPDYKVAINSRFRTSLDRALDLYR 340

Query: 55  ASRQKAL 35
            SR++AL
Sbjct: 341 GSREEAL 347


>UniRef50_Q9P9G5 Cluster: Ribosomal protein L12; n=9; Archaea|Rep:
           Ribosomal protein L12 - Methanococcoides burtonii
          Length = 100

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +3

Query: 99  VYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRD 245
           +Y+AL+L +    +T E +SA+L AA  +V          ALE +++ +
Sbjct: 4   IYAALLLHNAGKDITEESVSAVLSAAGTEVNESRAKALVAALEDVDIEE 52


>UniRef50_A4RXE9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
            Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 1803

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = -2

Query: 226  SKAFANRPGQYGSTSTAAAFSMAEIFSPVTATSSSTRIRAE*TQANSAFDA 74
            + A +   G +GSTS AAA + A +F   T+TSS +   A    A+SAF A
Sbjct: 1446 NSASSGGAGAFGSTSPAAAAASAPVFGASTSTSSQS---APAFGASSAFGA 1493


>UniRef50_P10623 Cluster: 50S ribosomal protein L12P; n=7;
           Archaea|Rep: 50S ribosomal protein L12P - Methanococcus
           vannielii
          Length = 99

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +3

Query: 99  VYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
           +Y+AL+L   +  VT E + A+L A  ++           ALEG+++ + I
Sbjct: 4   IYAALLLNSANKEVTEEAVKAVLVAGGIEANDARVKALVAALEGVDIAEAI 54


>UniRef50_Q9A5N3 Cluster: Putative uncharacterized protein; n=1;
           Caulobacter vibrioides|Rep: Putative uncharacterized
           protein - Caulobacter crescentus (Caulobacter
           vibrioides)
          Length = 524

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 23/55 (41%), Positives = 28/55 (50%)
 Frame = -2

Query: 190 STSTAAAFSMAEIFSPVTATSSSTRIRAE*TQANSAFDAILNVIRASRQKALAQG 26
           S +TAAAFS A   SPV+A  + T      TQ NS  D     +RA  Q  +A G
Sbjct: 311 SNNTAAAFSTALASSPVSAPPAFTNPLTGATQTNSLADQ----LRAVAQTIVAHG 361


>UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;
           n=16; Burkholderiaceae|Rep: Transcriptional regulator,
           AraC family - Burkholderia sp. (strain 383)
           (Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
           R18194))
          Length = 352

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +3

Query: 114 ILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEG 230
           +L +    VT E+ S + +  A+D++   PG+F++ L G
Sbjct: 58  LLGEPHARVTEEQFSTLYRTLAIDLDDEMPGIFSRPLRG 96


>UniRef50_Q2HEL4 Cluster: Predicted protein; n=1; Chaetomium
           globosum|Rep: Predicted protein - Chaetomium globosum
           (Soil fungus)
          Length = 635

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 160 AEIFSPVTATSSSTRIRAE*TQANSAFD-AILNVIRASR 47
           A +F P+T+TSSST ++ + T   S  D  ILN +  SR
Sbjct: 168 APVFDPLTSTSSSTTLQVDSTTDRSRTDWQILNSVILSR 206


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,276,399
Number of Sequences: 1657284
Number of extensions: 3770801
Number of successful extensions: 10378
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 10005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10367
length of database: 575,637,011
effective HSP length: 62
effective length of database: 472,885,403
effective search space used: 10403478866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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