Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B19
(254 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 111 9e-26
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 111 9e-26
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 111 9e-26
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 105 8e-24
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 29 0.65
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 29 0.86
EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin pro... 29 0.86
BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p pro... 29 0.86
AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p pro... 29 0.86
AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA... 29 0.86
AY061562-1|AAL29110.1| 249|Drosophila melanogaster LP11415p pro... 29 1.1
AE014298-1718|AAF48118.1| 249|Drosophila melanogaster CG2471-PA... 29 1.1
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 28 1.5
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 28 1.5
AE013599-3695|AAF47069.1| 1201|Drosophila melanogaster CG5549-PA... 27 3.5
AY113647-1|AAM29652.1| 1081|Drosophila melanogaster SD10773p pro... 26 6.0
AE014297-1482|AAF54780.1| 1081|Drosophila melanogaster CG10042-P... 26 6.0
AE014297-1481|AAF54781.2| 1169|Drosophila melanogaster CG10042-P... 26 6.0
BT022160-1|AAY51554.1| 520|Drosophila melanogaster IP01388p pro... 26 8.0
AY069721-1|AAL39866.1| 285|Drosophila melanogaster LP02658p pro... 26 8.0
AE014298-690|AAF45994.2| 543|Drosophila melanogaster CG32772-PA... 26 8.0
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 111 bits (268), Expect = 9e-26
Identities = 52/61 (85%), Positives = 59/61 (96%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
M++KAELACVY++LILVDDDVAVTGEKI+ ILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 252 T 254
T
Sbjct: 61 T 61
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 111 bits (268), Expect = 9e-26
Identities = 52/61 (85%), Positives = 59/61 (96%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
M++KAELACVY++LILVDDDVAVTGEKI+ ILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 252 T 254
T
Sbjct: 61 T 61
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 111 bits (268), Expect = 9e-26
Identities = 52/61 (85%), Positives = 59/61 (96%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
M++KAELACVY++LILVDDDVAVTGEKI+ ILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 252 T 254
T
Sbjct: 61 T 61
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 105 bits (252), Expect = 8e-24
Identities = 50/61 (81%), Positives = 57/61 (93%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISAILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
M++KAELA VY++LILVDDDVAVTGEKI+ ILKAA V+VEPYWPGLFAKALE INV+DLI
Sbjct: 1 MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60
Query: 252 T 254
T
Sbjct: 61 T 61
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 29.5 bits (63), Expect = 0.65
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 253 VIKSRTLMPSKAFANRPGQYGSTSTAAAFSMAEI 152
+I S+ L+P+K N P QY T+ A A+I
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288
Score = 29.1 bits (62), Expect = 0.86
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 244 SRTLMPSKAFANRPGQYGSTSTAAAFSMAEIFSPVTATSSSTR 116
S+ +P+K N P QY T+ A A+ SP S T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 29.1 bits (62), Expect = 0.86
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 244 SRTLMPSKAFANRPGQYGSTSTAAAFSMAEIFSPVTATSSSTR 116
S+ +P+K N P QY T+ A A+ SP S T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 244 SRTLMPSKAFANRPGQYGSTSTAAAFSMAEI 152
S+ L+P+K N P QY T+ A A+I
Sbjct: 258 SQNLVPAKTHINTPTQYNDTNATNALKTAKI 288
>EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin protein.
Length = 1840
Score = 29.1 bits (62), Expect = 0.86
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 214 ANRPGQYGSTSTAAAFSMAEIFSPVTATSSST 119
A+ PGQ +TS+ A S S T+TSSST
Sbjct: 1557 ASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588
>BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p protein.
Length = 1840
Score = 29.1 bits (62), Expect = 0.86
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 214 ANRPGQYGSTSTAAAFSMAEIFSPVTATSSST 119
A+ PGQ +TS+ A S S T+TSSST
Sbjct: 1557 ASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588
>AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p
protein.
Length = 934
Score = 29.1 bits (62), Expect = 0.86
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 214 ANRPGQYGSTSTAAAFSMAEIFSPVTATSSST 119
A+ PGQ +TS+ A S S T+TSSST
Sbjct: 651 ASTPGQVSTTSSVATSSTQRATSSSTSTSSST 682
>AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA
protein.
Length = 1837
Score = 29.1 bits (62), Expect = 0.86
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 214 ANRPGQYGSTSTAAAFSMAEIFSPVTATSSST 119
A+ PGQ +TS+ A S S T+TSSST
Sbjct: 1554 ASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1585
>AY061562-1|AAL29110.1| 249|Drosophila melanogaster LP11415p
protein.
Length = 249
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 39 AFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISAI 164
+F L ++ FK+ S A L +A++ +D D A+T + ++ +
Sbjct: 174 SFIVLPQVVFKLQSLASLDAQNNAILEIDTDEAITSDNLALV 215
>AE014298-1718|AAF48118.1| 249|Drosophila melanogaster CG2471-PA
protein.
Length = 249
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 39 AFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISAI 164
+F L ++ FK+ S A L +A++ +D D A+T + ++ +
Sbjct: 174 SFIVLPQVVFKLQSLASLDAQNNAILEIDTDEAITSDNLALV 215
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 244 SRTLMPSKAFANRPGQYGSTSTAAAFSMAEIFSPVTATSSSTR 116
S+ +P+K N P QY T+ A A+ SP S T+
Sbjct: 333 SQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 244 SRTLMPSKAFANRPGQYGSTSTAAAFSMAEIFSPVTATSSSTR 116
S+ +P+K N P QY T+ A A+ SP S T+
Sbjct: 333 SQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375
>AE013599-3695|AAF47069.1| 1201|Drosophila melanogaster CG5549-PA
protein.
Length = 1201
Score = 27.1 bits (57), Expect = 3.5
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 250 IKSRTLMPSKAFANRPGQYGSTSTAAAFSMAEIFSPVTATSSSTRIRAE*TQA 92
IK+ + P+KA ++PG S + AA S A + +SSS + A T A
Sbjct: 1132 IKAGSTSPTKAVVSKPG--ASAAKTAAASAATATATAAGSSSSNKKAATSTAA 1182
>AY113647-1|AAM29652.1| 1081|Drosophila melanogaster SD10773p
protein.
Length = 1081
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -2
Query: 250 IKSRTLMPSKAFANRPGQYGSTSTAAAFSMAEIFSPVTATSSSTRIRAE 104
I S+ +PS + QY A+ AE+ SP T + T+ + E
Sbjct: 463 ITSQHSLPSTPMPVKESQYMEAPVASLMPPAELMSPQTQPADETKPKIE 511
>AE014297-1482|AAF54780.1| 1081|Drosophila melanogaster CG10042-PA,
isoform A protein.
Length = 1081
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -2
Query: 250 IKSRTLMPSKAFANRPGQYGSTSTAAAFSMAEIFSPVTATSSSTRIRAE 104
I S+ +PS + QY A+ AE+ SP T + T+ + E
Sbjct: 463 ITSQHSLPSTPMPVKESQYMEAPVASLMPPAELMSPQTQPADETKPKIE 511
>AE014297-1481|AAF54781.2| 1169|Drosophila melanogaster CG10042-PB,
isoform B protein.
Length = 1169
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -2
Query: 250 IKSRTLMPSKAFANRPGQYGSTSTAAAFSMAEIFSPVTATSSSTRIRAE 104
I S+ +PS + QY A+ AE+ SP T + T+ + E
Sbjct: 551 ITSQHSLPSTPMPVKESQYMEAPVASLMPPAELMSPQTQPADETKPKIE 599
>BT022160-1|AAY51554.1| 520|Drosophila melanogaster IP01388p
protein.
Length = 520
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 252 LLNHEH*CPPRPLQIDQASTAQHLQQPLSV 163
L NH H P P + +A T Q QQPL++
Sbjct: 379 LTNHAHHELPPPKRSKKAGTLQTSQQPLAM 408
>AY069721-1|AAL39866.1| 285|Drosophila melanogaster LP02658p
protein.
Length = 285
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 252 LLNHEH*CPPRPLQIDQASTAQHLQQPLSV 163
L NH H P P + +A T Q QQPL++
Sbjct: 144 LTNHAHHELPPPKRSKKAGTLQTSQQPLAM 173
>AE014298-690|AAF45994.2| 543|Drosophila melanogaster CG32772-PA
protein.
Length = 543
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 252 LLNHEH*CPPRPLQIDQASTAQHLQQPLSV 163
L NH H P P + +A T Q QQPL++
Sbjct: 402 LTNHAHHELPPPKRSKKAGTLQTSQQPLAM 431
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,718,312
Number of Sequences: 53049
Number of extensions: 180127
Number of successful extensions: 608
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 431864640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -