Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B18
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    26   0.20 
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    25   0.60 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    24   1.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    24   1.0  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   1.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   5.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.4  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   9.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.8  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.8  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 184 LKQHKEVLFQQYVHSFQ*PLLWLLQEMKNIRIQNL 80
           L +H    FQ Y+H F   LL+L+ +M  +R + L
Sbjct: 147 LCRHTVEYFQNYIHFFYQLLLYLITDMILMRYKEL 181


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +1

Query: 292 GGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAY 429
           G Y+ P +      +GP    QIRP      QP   P  Q P + +
Sbjct: 82  GNYYHPQL---HSHHGPPIHHQIRPPILHDTQPMCNPQLQVPRTFF 124


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 340 PAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 441
           P Q P I+  P    QPP   +   P+  Y  M+
Sbjct: 204 PHQQPPIQQQPNQGQQPPGNTAAALPSPLYPWMR 237


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 340 PAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 441
           P Q P I+  P    QPP   +   P+  Y  M+
Sbjct: 206 PHQQPPIQQQPNQGQQPPGNTAAALPSPLYPWMR 239


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 450 PSSTKSSNTGCITY 491
           PSSTKS + G +TY
Sbjct: 75  PSSTKSGSPGFLTY 88



 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = +1

Query: 304 VPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS 405
           VP +   +   GP  + +  P  +  +QP + P+
Sbjct: 159 VPEVGGVEEAKGPVDLSKSEPEKKTESQPMLWPA 192


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 531 RWHGWINPCTSCY 569
           +W    NPCT+C+
Sbjct: 685 QWTSSDNPCTTCF 697


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 283 SSAGGYFVPTIPPAQRFYGPA 345
           S +GG+    +PP Q F  P+
Sbjct: 205 SPSGGFLPKWLPPLQGFSDPS 225


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 398 DQALKHLHRLTQICNHPTVLHQELQHRLH 484
           D AL+ +  L ++CN+ T       HR H
Sbjct: 143 DAALRKVVPLKKLCNNGTCEDIGNSHRCH 171


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 250 AYLPCVACTVKSNGLCGLPCV 188
           A  PCV+C    +G C  P +
Sbjct: 41  AVKPCVSCGPGQSGQCFGPSI 61


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
 Frame = +3

Query: 345 TNAANTTYTPMDCPTTCKTKHSNTCIGLRKY---ATTLPSSTKS 467
           T+ +N TY+     T+C +  +    G   Y   AT+ P +  S
Sbjct: 89  TSTSNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQPPTDNS 132


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 306 SHHTSCTTLLWSSTNAANTTYT 371
           ++  SC  + WS+T  A +T T
Sbjct: 168 ANEISCPQVQWSATPQAGSTPT 189


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 477 GCITYFSRSKTNHRTTRCRW 536
           GC  +F RS T +   +C++
Sbjct: 207 GCKGFFRRSITKNAVYQCKY 226


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 94  VCFSSPEEATKA 129
           VC+S+ EEA KA
Sbjct: 579 VCYSTIEEANKA 590


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 94  VCFSSPEEATKA 129
           VC+S+ EEA KA
Sbjct: 304 VCYSTIEEANKA 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.132    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,577
Number of Sequences: 336
Number of extensions: 3383
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)