Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B18
(570 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 116 1e-26
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 50 1e-06
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 50 1e-06
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 45 4e-05
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 44 7e-05
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 43 2e-04
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 42 3e-04
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 39 0.003
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 39 0.003
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 37 0.010
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 37 0.010
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 36 0.018
SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 36 0.031
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 36 0.031
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.054
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 35 0.054
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.071
SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19) 34 0.071
SB_12447| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 33 0.12
SB_13699| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 32 0.38
SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45) 31 0.50
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 31 0.88
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 31 0.88
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 30 1.2
SB_47717| Best HMM Match : EGF (HMM E-Value=1.9e-29) 30 1.2
SB_17957| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 30 1.2
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_55766| Best HMM Match : Keratin_B2 (HMM E-Value=1.8) 30 1.5
SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_44205| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_5218| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 29 3.5
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 29 3.5
SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69) 29 3.5
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_53239| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_25707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 28 4.7
SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_18498| Best HMM Match : PX (HMM E-Value=1.6e-15) 28 4.7
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 28 4.7
SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027) 28 4.7
SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30) 28 4.7
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 28 4.7
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 28 6.2
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 28 6.2
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_55443| Best HMM Match : Homeobox (HMM E-Value=2.3e-26) 28 6.2
SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34) 28 6.2
SB_28137| Best HMM Match : rve (HMM E-Value=0.00026) 28 6.2
SB_14693| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_35947| Best HMM Match : IQ (HMM E-Value=0.00061) 27 8.2
SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_20177| Best HMM Match : hATC (HMM E-Value=1e-04) 27 8.2
SB_3245| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_49159| Best HMM Match : WD40 (HMM E-Value=1.4) 27 8.2
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 27 8.2
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_23092| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_12305| Best HMM Match : NAF1 (HMM E-Value=8) 27 8.2
SB_2557| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 116 bits (280), Expect = 1e-26
Identities = 56/70 (80%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 186
LR+EF+P+GTI+SAKVM +D G SKGFGFVCFSSPEEATKAVTEMNGRI+ +KPLYVALA
Sbjct: 228 LREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMNGRILISKPLYVALA 287
Query: 187 QRKEDRKAHL 216
QR+E+RKA L
Sbjct: 288 QRREERKAQL 297
Score = 60.5 bits (140), Expect = 9e-10
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 25 APFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 201
A G I S KVM + +G+SKGFGFV F +PEEA +AV +NG+ +G + L+ A+++ +
Sbjct: 130 AEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKKRAE 189
Query: 202 RKAHL 216
R A +
Sbjct: 190 RAAEV 194
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 183
L + F PFGT+ SAKV ++ SK FGFV + + A A+ MNG +G K L V L
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQL 337
Query: 184 AQRKEDRKAH 213
+ K+ + +
Sbjct: 338 KRPKDANRPY 347
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVML--EDGRSKGFGFVC 99
L + F PFGT+ SAKV + + SK FG C
Sbjct: 245 LMQTFQPFGTVISAKVFIDKQTNMSKCFGECC 276
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 183
L + F PFGT+ SAKV ++ SK FGFV + + A A+ MNG +G K L V L
Sbjct: 293 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQL 352
Query: 184 AQRKEDRKAH 213
+ K+ + +
Sbjct: 353 KRPKDANRPY 362
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +1
Query: 22 FAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 195
F PFGT+ S +++ E RSKG+GFV F E A +A+ +MNG + +PL + +
Sbjct: 262 FEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMNGFELAGRPLKIGPVTER 321
Query: 196 EDRKAH 213
D A+
Sbjct: 322 GDSSAY 327
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 183
++K F G +TS K++ + G+S G+ FV + +P++A KAV EMNG + K L V+
Sbjct: 43 IKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSF 102
Query: 184 AQ 189
A+
Sbjct: 103 AR 104
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 147
L K F+P+G IT+ ++ L+ KG+GFV S+ EEA A+ +NG
Sbjct: 288 LYKLFSPYGAITNIELKLD----KGYGFVNMSNYEEACHAICCLNG 329
Score = 35.5 bits (78), Expect = 0.031
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 22 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGR 150
F PFG I ++KV+ + G +G GFV F EA A+ ++N +
Sbjct: 133 FKPFGKIITSKVLKDVSGEGRGTGFVRFDKRCEAQTAIDDLNNK 176
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +1
Query: 64 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKA 210
E GR +GFGFV F S EE KA+ E +G+ +P+ V AQ + +R A
Sbjct: 40 ETGRPRGFGFVTFGSKEEMEKAIDEFDGQDFDGRPMKVNQAQPRGERGA 88
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +1
Query: 22 FAPFGTITSAKVMLED---GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 192
F+ FG I ++ D G SKGF F+ F+S + + A+ MNG+ + +P+ V+ A +
Sbjct: 120 FSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFK 179
Query: 193 KEDR 204
KE +
Sbjct: 180 KESK 183
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 64 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 201
E GR +GFGFV F S EE KA+ E +G+ + +P+ V A+ + D
Sbjct: 132 ETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEAKPRGD 177
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 7 GLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAV 132
GL+ F+ +GTI +M DGRS+GFGFV + S + + +
Sbjct: 65 GLKDYFSQWGTIVDCVIMKRDGRSRGFGFVTYESSDSVNEVL 106
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 64 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRK 207
E GRS+GFGFV S ++ A+ +MN VG + + VALA K + +
Sbjct: 44 ESGRSRGFGFVLLQSADQIAPAIEKMNQSSVGGRNITVALALDKTENR 91
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +1
Query: 40 ITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 204
+ S KV+ E GR +GFGFV F S +E KA+ + +G + +P+ V AQ + +R
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPRGER 91
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +1
Query: 64 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 180
++ RS+GFGFV F++PE+A AV +NG+ V + L +A
Sbjct: 94 QEPRSRGFGFVTFANPEDAQTAVKSLNGKEVQGRTLKIA 132
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +1
Query: 13 RKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 186
R F ++ + K++ G S GFGFV +++ E+A KA+ ++NG +G K L VA +
Sbjct: 64 RMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKLNGFTIGNKVLKVAFS 123
Query: 187 Q 189
+
Sbjct: 124 R 124
Score = 33.9 bits (74), Expect = 0.094
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 7 GLRKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 171
G+ F G + +M + R KGF FV ++ EEA A+ +NG + KPL
Sbjct: 290 GITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQTLNGFMYTNKPL 346
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +1
Query: 73 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 201
+SKGFGFV F E+A KA+ EM+ +G K + A RK +
Sbjct: 552 KSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNN 594
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMN 144
L + FA + + AK++ + +SKG+GFV F P + KA+ EMN
Sbjct: 233 LTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMREMN 279
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLED----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 177
L++ F+ FG ++ A V + R GFGFV F++ +A KA+ EMN + + +P+ V
Sbjct: 263 LKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKALEEMNAKKILGRPVAV 322
Query: 178 ALAQRK 195
A K
Sbjct: 323 DWAVPK 328
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +1
Query: 73 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRK 207
R +GFG+V F+ E+A KA + N + + +P+++ +++K K
Sbjct: 60 RCRGFGYVTFALEEDALKA--KDNIKSIKGRPIHLDFSEKKARTK 102
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +1
Query: 22 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 201
F G + +V+ ++GRS+GFG+ F+S E+ KA+ E+NG + + + A K
Sbjct: 200 FEEKGLSATCRVITQEGRSRGFGYADFTSKEDYNKAL-ELNGEDCCGREIRINPANSKPS 258
Query: 202 R 204
R
Sbjct: 259 R 259
Score = 35.9 bits (79), Expect = 0.023
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 25 APFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 198
A F ++AKV+ E G S+GFGFV + E A K ++EM G V + + + A +
Sbjct: 307 AAFEGCSNAKVIFDRESGESRGFGFVDYDDVETAKKVLSEMAGAEVDGRQVRLDFASPRT 366
Query: 199 D 201
+
Sbjct: 367 E 367
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +1
Query: 7 GLRKE-FAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 177
GL KE F+ G +T A+V + +G S+GF FV +++ EEA K NGR V + V
Sbjct: 220 GLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQVEGSNIRV 279
Query: 178 A 180
A
Sbjct: 280 A 280
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +1
Query: 25 APFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEM---NGRIVGTKPLYVALAQ 189
+P+G I ++ + G SKG+GFV +++ E A +A ++ + +G + L VA A+
Sbjct: 134 SPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQLLNTASKYIGGRILRVAFAE 193
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 183
L F PFG IT ++ ++ SK GFGFV F E+ A+ MN + + + V L
Sbjct: 21 LHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMNESELFGRTIRVNL 80
Query: 184 AQ 189
A+
Sbjct: 81 AK 82
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 177
+R F PFG I + + + + KGF FV + PE A A+ +MNG ++G + + V
Sbjct: 118 IRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQMNGVLLGGRNIKV 175
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMN 144
++ F FG + + E G+ KG+GF+ + + + A A+ MN
Sbjct: 215 IKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMN 261
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 73 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 195
R +GFGFV F++ EA KA ++NG IV + + V+L +
Sbjct: 122 RIEGFGFVTFNTAAEANKAREKLNGTIVDGRKVEVSLCMEQ 162
>SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 35.9 bits (79), Expect = 0.023
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 189
L++EF G + +V E RS+GF V F + E A KA+ EMNG V + V++A+
Sbjct: 124 LKEEFNHLGHVE--RVNFEKNRSQGF--VTFDTWEAADKAIDEMNGLKVQHVHIRVSMAR 179
Query: 190 RK 195
R+
Sbjct: 180 RQ 181
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAV 132
L F P+G I ++ + G+SKGFG+V + + E A +A+
Sbjct: 79 LESVFGPYGAIEDLSIIRTQTGKSKGFGYVTYENAESAQRAL 120
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 35.5 bits (78), Expect = 0.031
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Frame = +1
Query: 1 ARGLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEA----TKAVTEMNGR--IV 156
A GLR+ F FG + VM + RS+GFGF+ F P+ E++G+ +
Sbjct: 121 AEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKMVT 180
Query: 157 GTKPLYV 177
TK +++
Sbjct: 181 TTKKIFI 187
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 34.7 bits (76), Expect = 0.054
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 307 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAY 429
P+ PP Q FY P Q P PTP ++ PP +PS A +Y
Sbjct: 170 PSYPPTQPFYPPTQ-PFYPPTP--SSYPPTQPSYPPTAPSY 207
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +1
Query: 307 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAY 429
P PP Q FY P P P P + PP PS S+Y
Sbjct: 177 PFYPPTQPFYPPT--PSSYP-PTQPSYPPTAPSYPPTPSSY 214
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 34.7 bits (76), Expect = 0.054
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 31 FGTITSAKVMLEDGRS--KGFGFVCFSSPEEATKAVTEM 141
+GTI S K +L+ + KG+GFV F SP A KAV +
Sbjct: 123 YGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAVAAL 161
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIV 156
L F+ +G + S +++ + D SKG GF S E+ + + + N +++
Sbjct: 195 LENMFSKYGKVISTRILRDKDTNSKGVGFARMESAEKCEQVIKDFNKKML 244
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 34.3 bits (75), Expect = 0.071
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 183
+++ F FG I +V L+ RS+GFGFV F E+A K V + RI G + V L
Sbjct: 131 MKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDA-KNVLSTSHRIQG-RLCEVRL 188
Query: 184 AQRKED 201
+ KE+
Sbjct: 189 PRPKEE 194
>SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19)
Length = 623
Score = 34.3 bits (75), Expect = 0.071
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 82 GFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 201
G GFV F PE A KA E++G + + L++ A+ K++
Sbjct: 283 GIGFVTFLMPEHAVKAFNELDGTVFQGRLLHILPAKAKKE 322
>SB_12447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 33.9 bits (74), Expect = 0.094
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 58 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 171
++++GR KG FV S E+A +A+ E++G ++ KP+
Sbjct: 285 LMKEGRMKGQAFVTLPSEEKAKRALREVHGYMLHGKPI 322
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 183
L++ F+ G + S +++ E G+ KG+GF + E A A+ +NG + + L V
Sbjct: 41 LKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYELNGRALRVDS 100
Query: 184 AQRKEDRK 207
A +++++
Sbjct: 101 AASEKNKE 108
>SB_13699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 32.7 bits (71), Expect = 0.22
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Frame = +3
Query: 222 TVHAT----HGKYAYATNGSDIPTK*CRRILCSHHTSCTTLLWSSTNAANTTYTPMDCPT 389
T+HAT H Y + T T R +C+ +T T+ TY + P
Sbjct: 173 TLHATYITLHAPYVHTTRHVHHTT----RTVCAQYTPRTSHYTHRMCTLRATYITIHAPY 228
Query: 390 TCKTKHSNTCIGLR-KYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCR 533
T+H++ L YA T ++ T C Y R T+H T R R
Sbjct: 229 AHSTRHTHRMCALHAPYAHTTRHVQHTTRTVCAHYTPR--TSHYTHRMR 275
Score = 29.5 bits (63), Expect = 2.0
Identities = 28/114 (24%), Positives = 37/114 (32%), Gaps = 2/114 (1%)
Frame = +3
Query: 231 ATHGKYAYATNGSDIPTK*CRRILCSHHTSCTTLLWSSTNAANTTYTPMDCP--TTCKTK 404
A H YA+ T T R +C+H+T T+ + TY + P T +
Sbjct: 240 ALHAPYAHTTRHVQHTT----RTVCAHYTPRTSHYTHRMRTLHATYITLHAPYAHTTRQV 295
Query: 405 HSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCRWHGWINPCTSC 566
H T YA T TY + TTR H C C
Sbjct: 296 HHTTRTVCAHYAPRTSHYTLRMRAVHATYITLHAPYVHTTRHVHHTTRTVCAHC 349
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +3
Query: 222 TVHAT----HGKYAYATNGSDIPTK*CRRILCSHHTSCTTLLWSSTNAANTTYTPMDCPT 389
T+HAT H YA+ T T R +C+H+ T+ A + TY + P
Sbjct: 276 TLHATYITLHAPYAHTTRQVHHTT----RTVCAHYAPRTSHYTLRMRAVHATYITLHAPY 331
Query: 390 TCKTKH 407
T+H
Sbjct: 332 VHTTRH 337
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 31.9 bits (69), Expect = 0.38
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 159
LRK FA FG I A V+ + +SKG+GFV ++ + A A I G
Sbjct: 26 LRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKNKRPMIEG 77
>SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45)
Length = 825
Score = 31.5 bits (68), Expect = 0.50
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 324 TTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNT 476
TT++ T NT+ TP+ P+T T+ + + + AT PS T S++T
Sbjct: 177 TTVVTQVTTMPNTSVTPLTSPSTSVTQRTRPTTPVTQEAT--PSQTSSAST 225
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 73 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 198
R +GFGFV F S A KA + ++ K + V AQ KE
Sbjct: 10 RHRGFGFVTFESENSADKA-CDTQYHLINNKKVEVKKAQPKE 50
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 85 FGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 201
FGFV F + + A +AV + +GRI+ K + V + + D
Sbjct: 82 FGFVQFETEKGADEAVAKEHGRIINGKKIDVRIVNSRAD 120
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTK 165
LR+ F G + S +++ + G KGFG+V F S + A+ N G K
Sbjct: 72 LRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRK 125
>SB_47717| Best HMM Match : EGF (HMM E-Value=1.9e-29)
Length = 214
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +3
Query: 303 CSHHTSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCI 422
CS H +C + S T A N YT C T SN CI
Sbjct: 95 CSEHGACIDGVNSYTCACNLGYTGSTCNVTVNDCISNPCI 134
>SB_17957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 892
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 297 ILCSHHTSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPS 455
IL + T T++W T ++NTT+ + T T+ + + Y+ +P+
Sbjct: 242 ILMADITPGNTMIWKITTSSNTTWNDVSFAVTMDTQEVIVTVNGKSYSARVPT 294
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +3
Query: 303 CSHHTSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCI 422
CS H +C + S T A N YT C T SN CI
Sbjct: 674 CSEHGACIDGVNSYTCACNLGYTGSTCNVTVNDCISNPCI 713
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/58 (27%), Positives = 20/58 (34%)
Frame = +3
Query: 246 YAYATNGSDIPTK*CRRILCSHHTSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNTC 419
Y Y +I T C C H +CT L+ YT +C T N C
Sbjct: 2080 YGYEGRNCEINTDDCAANPCLHGATCTDLVGGFVCTCALGYTDHNCSTIIDNCDPNPC 2137
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = +3
Query: 303 CSHHTSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGC 482
C+H CT + + T YT +C T +S+ C Y T SS C
Sbjct: 2137 CNHSGICTNKIGNYTCLCKGGYTGWNCNTLIDFCYSDPC----AYGATCVSSLADYTCAC 2192
Query: 483 IT-YFSRSKTNH 515
+ Y R+ T +
Sbjct: 2193 VPGYTGRNCTTN 2204
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR 150
++K F +G +++L+DG +GFV F ++A AV E NG+
Sbjct: 19 VKKFFYTYGRFKIREIILKDG----YGFVEFDYSDDAEDAVYECNGK 61
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 22 FAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGR 150
F G I ++M++ G +KGF F FS+ +EA AV +++ +
Sbjct: 172 FEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVKKLDNK 216
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +1
Query: 4 RGLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 183
R + +EF FG + V GF F F +A AV E++GR + + V L
Sbjct: 16 REIEREFETFGPLRDVWVARNP---PGFAFCVFEDRRDAEDAVRELDGRYICGQRARVEL 72
Query: 184 AQ 189
A+
Sbjct: 73 AK 74
>SB_55766| Best HMM Match : Keratin_B2 (HMM E-Value=1.8)
Length = 245
Score = 29.9 bits (64), Expect = 1.5
Identities = 29/109 (26%), Positives = 43/109 (39%)
Frame = +3
Query: 147 TYCWNKTSLCCFSSTQGRPQSPFDFTVHATHGKYAYATNGSDIPTK*CRRILCSHHTSCT 326
T C+ T+ C +S+ P T T+ K + T+GS C I C+ +SC
Sbjct: 113 TICFGPTNRCTTTSSTTISVGP---TNSCTNVKDSTNTSGSSTTIDVCPIITCTTTSSCC 169
Query: 327 TLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSN 473
T S TT PTT + + + + TT S T S +
Sbjct: 170 TTFNGSPTIIGTT---SGSPTTSNSPNISNGPTISSSPTTSGSPTISDS 215
>SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 288 CRRILCSHHTSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTK- 464
C+ L SH+T C + ++ +A ++ +T ++C TKHS TT P +
Sbjct: 112 CKEQL-SHNTPCKSSCQTTHHARSSCHTTHSARSSCHTKHSTR----SSCHTTQPCKKQL 166
Query: 465 SSNTGCITYFSRS 503
S NT C S +
Sbjct: 167 SHNTPCTEKLSHN 179
Score = 27.5 bits (58), Expect = 8.2
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = +3
Query: 309 HHTSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCIT 488
H+T C L +T C ++C+T H +A + +T S+ + C T
Sbjct: 98 HNTPCKEQLSHNTPCKEQLSHNTPCKSSCQTTH---------HARSSCHTTHSARSSCHT 148
Query: 489 YFSRSKTNHRTTRCRWHGWIN-PCT 560
S + H T C+ N PCT
Sbjct: 149 KHSTRSSCHTTQPCKKQLSHNTPCT 173
>SB_44205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Frame = +3
Query: 306 SHHTSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNT--------CIGLRKYATTLPSST 461
S +TS T ++ST+ T + C TC SNT C Y +T +
Sbjct: 181 STYTSANTRTYTSTSTRANTISST-CANTCANTRSNTSANTRANTCSNTSTYTSTNTRAN 239
Query: 462 KSSNTGCITYFSRSKTNHRT 521
SSNT C S + T+ T
Sbjct: 240 TSSNT-CADTRSNTSTSSYT 258
>SB_5218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +3
Query: 321 CTTLLWSSTNAANTTYTPMDCPTT-CKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFS 497
C T+ +T NTT C TT C T H NT G T +T NT
Sbjct: 227 CNTIQ-CNTLQGNTT----QCNTTQCNTTHCNTTQGNTAQCNTTECNTAQCNTTQCNTAQ 281
Query: 498 RSKTNHRTTRC 530
+ T TT+C
Sbjct: 282 CNTTQCNTTQC 292
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNG 147
L++ F P G I+ + + +SKGF F+ F E+A +A+ ++G
Sbjct: 197 LQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHREDAARAIEVLSG 244
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Frame = +1
Query: 331 FYGPAQMPQIRP----TPRWTAQPPVRPSTQT 414
FYG A P +RP TP TA+PP P T T
Sbjct: 1003 FYGCASDPVLRPADLPTPPITAKPPGGPDTTT 1034
>SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69)
Length = 166
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 61 LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTK 165
L+ GRSK +GFV F E KA+ I G K
Sbjct: 97 LKSGRSKKYGFVFFKDEEACEKAMGNQPHFIEGQK 131
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 31 FGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 177
+G I + ++ + G+ KGF F+C+ AV NG +G + + V
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRV 52
>SB_53239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +1
Query: 10 LRKEFAPFGTITSAKVML-----EDGRSKGFGFVCFSSPEEATKAVTEMNGR 150
L + F +G + S K+M E R++ GFV + ++ KA+ + G+
Sbjct: 222 LMRLFGKYGPLASVKIMWPRTEEEKSRNRNCGFVAYMRRKDGDKAIKHLTGK 273
>SB_25707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +3
Query: 312 HTSCTTLLWSSTNAANTTYTPMDCPT----TCKTKHSNTCIGLRKYATTLPSSTKSSNTG 479
+++CTT +T +NT YT C T TC T +TC Y + + +S+ T
Sbjct: 8 NSTCTT----NTYRSNTNYTYSTCTTNTNSTCTTNTYSTCT-TNTYRSNTNYTNRSNTTN 62
Query: 480 CITYFSRSKTNHRT 521
TY S + +R+
Sbjct: 63 --TYRSNTTNTYRS 74
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 79 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 204
+ +GFV F+ E A +A+ +NG + L V+LA + R
Sbjct: 35 RDYGFVYFAKRESAVQAIDGINGAYIDGCKLEVSLAIPQSSR 76
>SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 64 EDGRSKGFGFVCFSSPEEATKAVTEMNGRI 153
E+G++ G GFV F+SPE A +A+ + +I
Sbjct: 74 EEGKTTGEGFVEFASPEIAGQAMQKHKEKI 103
>SB_18498| Best HMM Match : PX (HMM E-Value=1.6e-15)
Length = 402
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 378 DCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCRW 536
D PT C + S++ IG A LP++T N+ C S+S R + W
Sbjct: 10 DPPTVCSERPSSSVIGANDSAGALPTTT---NSTCFV-SSKSCVRRRFSEFEW 58
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 4 RGLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 183
R + EF +G + V GF F F +A AV E++GR + + + V L
Sbjct: 46 REIENEFGYYGPLKDVWVARNP---PGFAFCIFDDRRDAEDAVRELDGRYICGQRVRVEL 102
Query: 184 AQ 189
A+
Sbjct: 103 AK 104
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 22 FAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNG 147
F+ +G + + + + + S+GF +V + PEE KA+ M+G
Sbjct: 1177 FSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHMDG 1220
>SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027)
Length = 253
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 91 FVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRK 207
+V F E+A KAV ++N R +P+Y L+ + R+
Sbjct: 116 YVKFRYEEDAEKAVNDLNNRWYNGQPIYAELSPVTDFRR 154
>SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30)
Length = 3015
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 342 STNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSS 458
+T NTT T TT T H NT I TT+P++
Sbjct: 1095 TTAHINTTITTAHINTTITTAHINTTITTAHINTTIPTA 1133
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +3
Query: 273 IPTK*CRRILCSHHTSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLP 452
IPT + + HT+ T +T NTT T TT T H NT I TT+
Sbjct: 1130 IPTAHINTTITTAHTNTTI----TTAHINTTITTAHINTTITTAHINTTITTAHINTTIT 1185
Query: 453 SS 458
++
Sbjct: 1186 TA 1187
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +1
Query: 274 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQ--PPVRPSTQT-PASAYANMQ 441
+ P+S P P Q+ Y P PQ P P + Q PP P QT P A A Q
Sbjct: 153 YPPTSYPPQPYPAQPYPQQGYPPQPPPQAYPQPGYPPQGYPPTGPYPQTQPGYAGATPQ 211
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 79 KGFGFVCFSSPEEATKAVTEMNGR-IVGTK 165
+G+GFV F +A AV ++NGR ++G +
Sbjct: 722 RGYGFVEFDDHRDAEDAVHDLNGRDLIGER 751
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +3
Query: 339 SSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATT-----LPSSTKSSNTGCITYFSRS 503
+ST A T + P T K SN + ++T +P ++KSS TG + SRS
Sbjct: 1749 ASTEATEMTQKFSNVPATVALKSSNVEAKITPKSSTDAARLIPKASKSS-TGSVNVKSRS 1807
Query: 504 KTN 512
TN
Sbjct: 1808 STN 1810
>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 309 HHTSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNT-CIGLRKYAT-TLPSSTKSSNTGC 482
HHT C ST N P+ P+ ++++ +T C + ++T T P + +S
Sbjct: 1152 HHTKCHHTTSHSTITQNAITQPVTVPSHNQSQYHHTKCHHMTSHSTITQPVTVQSHKMPS 1211
Query: 483 ITYFSRSKTNHRTTRC 530
S + + + T+C
Sbjct: 1212 HKMRSHNHSQYHHTKC 1227
>SB_55443| Best HMM Match : Homeobox (HMM E-Value=2.3e-26)
Length = 245
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 316 PPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTP 417
P R Y P Q P P P + A PP+ PS+ P
Sbjct: 175 PQVYRGY-PFQYPGTPPPPMYPAFPPIFPSSPPP 207
>SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = +3
Query: 342 STNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKT 509
S AN+ TP + P K HS +K A + +TKS RSK+
Sbjct: 493 SNRIANSNDTPTEQPLNMKEAHSKKSTATKKGAKSKSKATKSKRAKQTFTNKRSKS 548
>SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34)
Length = 1120
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 339 SSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTG 479
S+ N+ NT P T+C+ S C+G T LP+ + G
Sbjct: 522 SAGNSINTERPPNVTQTSCERLKSKICLGFGYNDTILPNHLNHKSQG 568
>SB_28137| Best HMM Match : rve (HMM E-Value=0.00026)
Length = 293
Score = 27.9 bits (59), Expect = 6.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 104 EKHTNPKPLLRPSSNMTLAEVIVPK 30
++H P P+L P +T+ E +PK
Sbjct: 181 DRHVKPLPILHPGQPVTIQEPTIPK 205
>SB_14693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 316 PPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTP 417
P R Y P Q P P P + A PP+ PS+ P
Sbjct: 175 PQVYRGY-PFQYPGTPPPPMYPAFPPIFPSSPPP 207
>SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1442
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 307 PTIPPA--QRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASA 426
P PPA RF G +P P R +PP +PS Q+ A+A
Sbjct: 363 PDGPPAPEDRFKGKRPIPT--PRKRSVKEPPNKPSPQSTANA 402
>SB_35947| Best HMM Match : IQ (HMM E-Value=0.00061)
Length = 1060
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 423 RCRCLSAWSYRWLGSPSGCRSYL 355
RCR L+ + +G P G RSYL
Sbjct: 671 RCRILNTYRIDGVGQPKGSRSYL 693
>SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +1
Query: 289 AGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAY 429
A +FVP +PP+ + P RP + A P P + + Y
Sbjct: 195 APNHFVPLLPPSPEPVPTPKAPASRPGTKRPASPSTPPKMPSKTAMY 241
>SB_20177| Best HMM Match : hATC (HMM E-Value=1e-04)
Length = 618
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +1
Query: 289 AGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAY 429
A +FVP +PP+ + P RP + A P P + + Y
Sbjct: 19 APNHFVPLLPPSPEPVPTPKAPASRPGTKRPASPSTPPKMPSKTAMY 65
>SB_3245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = +2
Query: 398 DQALKHL----HRLTQICNHPTVLHQELQHRLHYVLL*EQDQSQDNKVSLARLDQSVH 559
D L HL H I N+ + HQ + VLL QD + D++ L + H
Sbjct: 191 DSVLNHLNVSKHHQGDILNYQIMFHQGESRKRQTVLLHRQDNNHDHQTVLLHRQDNNH 248
>SB_49159| Best HMM Match : WD40 (HMM E-Value=1.4)
Length = 249
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 444 TLPSSTKSSNTGCITYFSRSKTNHRTTRCRWH 539
+LP S SS CI ++++KT H RWH
Sbjct: 14 SLPGSDDSSIDNCIYEYTKNKTPH---HIRWH 42
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 22 FAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNG 147
F FG + ++ E G+S+ GFV F S + A A MNG
Sbjct: 544 FNKFGPVKDVVILRDESGKSRQSGFVHFWSSDVAEAANVGMNG 586
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 27.5 bits (58), Expect = 8.2
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 318 SCTTLLWSSTNAANTT-YTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYF 494
+CTT S+T+ TT YTP TC T +++T Y T + +S T +Y
Sbjct: 105 TCTTSYTSTTSYTPTTSYTP-TTSYTCTTSYTST----TSYTPTTSYTPTTSYTLTTSY- 158
Query: 495 SRSKTNHRTTRCRWHGWINPCTSCY 569
T++ T H CT+ Y
Sbjct: 159 -TCTTSYTCTTSYTHTTSYTCTTSY 182
>SB_23092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Frame = +3
Query: 297 ILCSHHT---SCT---TLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSS 458
I+C H C T+ S+ + NTT T KT +N C R+ TT ++
Sbjct: 142 IICERHNRTIQCPANKTIDLSNNHEDNTTTVQTTATTAKKTTTNNNCTNNREDKTTTATT 201
Query: 459 TKSSNTGCITYFSRSKTNH 515
T ++ T ++ +N+
Sbjct: 202 TNNNCTNNSNNREKNNSNN 220
>SB_12305| Best HMM Match : NAF1 (HMM E-Value=8)
Length = 400
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 313 IPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPA 420
IPP YG A +P P A P +P + P+
Sbjct: 17 IPPGAADYGQAGVPPTSAIPGSAAPPTAQPRAEAPS 52
>SB_2557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 310 WEQSILLHYLVGISDPFVAYAYLPCVACTVKSNGLCGLPCVELKQHKEVLFQQ 152
WE+ I H +S F+ YLP + SN + ++LKQ + L Q
Sbjct: 225 WEEIISKHLWTAVSTHFIENIYLPAAQSSSASNFNTAVD-IKLKQWADRLLPQ 276
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.132 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,490,005
Number of Sequences: 59808
Number of extensions: 448820
Number of successful extensions: 3381
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 3057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3355
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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