Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B17
         (107 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   2.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    19   4.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 56  TSPRSVCRVPPSCR 15
           +SPRS+   P +CR
Sbjct: 64  SSPRSISEDPLNCR 77


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +1

Query: 13  ILHDGGTRHTERGLVTRTRTLIMQLLRDNL 102
           ++H G T+     ++ +TR   +  + +NL
Sbjct: 182 MVHQGETQFVAANVILKTRFKTINNILENL 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,205
Number of Sequences: 336
Number of extensions: 190
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 16
effective length of database: 117,209
effective search space used:  2226971
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)