Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B16
         (426 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   0.53 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   2.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   3.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.6  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   8.7  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.2 bits (50), Expect = 0.53
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 137 SVDSSYWKL*ARSGRSRYSFRLGFTRILARFTTSHFETCNTLL 9
           S  SS ++L +R+G+  Y    GF  I  + T   F   NTL+
Sbjct: 310 SKGSSCYRLLSRNGQFIYLRTFGFLEIDDQGTVESFVCVNTLV 352


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 359 CYSTYT*ISHWQERWSKSTC 418
           C+S++  IS  Q  W+  TC
Sbjct: 550 CWSSFLKISVLQSLWASPTC 569


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 233 RVSGKCIKGLESQTYH 280
           +++GK  +G+ S T+H
Sbjct: 628 KITGKMFQGVRSPTFH 643


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 371 MWNNTSTSNGGFNQTVKFFVSSDGKLQ 291
           +W NTS +   F + +   +  D KLQ
Sbjct: 91  VWINTSINGTKFIEFINKLIEFDVKLQ 117


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +2

Query: 167 SCRSYGSSLFCCYSGISNSRGFRVSGKCIK 256
           SC S+    F CY  I   R    +G  I+
Sbjct: 414 SCSSFFQQFFHCYCPIKFGRKADPNGDYIR 443


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,903
Number of Sequences: 336
Number of extensions: 1812
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)