Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B16
(426 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0433 + 3353255-3353374,3353532-3353828 182 1e-46
10_08_0018 + 14164103-14164225,14164596-14164892 176 5e-45
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 151 2e-37
12_02_0605 - 20924385-20924606,20924705-20924899 123 5e-29
12_02_0151 - 14468480-14468698,14468902-14469090 119 9e-28
07_03_0790 + 21536389-21536577,21536854-21537072 119 9e-28
03_05_0949 + 29089293-29089487,29089592-29089810 118 1e-27
07_03_0791 + 21539069-21539257,21539493-21539711 118 3e-27
05_05_0119 - 22512228-22512500,22512577-22512795 112 1e-25
03_02_0562 - 9469263-9469517,9469619-9469843 109 7e-25
05_01_0107 + 706936-707202,707231-707485 93 8e-20
08_02_0735 + 20564451-20564525,20566346-20566561 80 8e-16
02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098 31 0.51
12_02_0680 + 21903520-21904093,21904474-21905162 30 0.68
06_03_0197 + 17794418-17794771,17795040-17795549 30 0.68
11_01_0426 + 3271324-3271377,3272114-3272227,3272475-3272588,327... 29 2.1
01_06_1695 + 39251266-39252390,39252852-39252983,39253560-392537... 28 2.7
07_03_1555 - 27669981-27670148,27670232-27670315,27670349-276703... 28 3.6
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 28 3.6
02_02_0707 + 13144147-13144788,13145115-13148663 28 3.6
01_07_0278 - 42440405-42440515,42440765-42440830,42440995-424410... 27 4.8
05_06_0015 + 24953918-24954359,24955622-24955857,24955945-249560... 27 6.3
07_03_0898 - 22403337-22404950 27 8.3
04_01_0213 - 2692253-2694562 27 8.3
01_06_1584 - 38441654-38442847 27 8.3
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 27 8.3
>03_01_0433 + 3353255-3353374,3353532-3353828
Length = 138
Score = 182 bits (442), Expect = 1e-46
Identities = 88/96 (91%), Positives = 92/96 (95%)
Frame = +3
Query: 108 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 287
LQFPVGRIHR LK+R ++HGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR
Sbjct: 39 LQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 98
Query: 288 HLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 395
HLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 99 HLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 134
>10_08_0018 + 14164103-14164225,14164596-14164892
Length = 139
Score = 176 bits (429), Expect = 5e-45
Identities = 85/96 (88%), Positives = 91/96 (94%)
Frame = +3
Query: 108 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 287
+QFPVGRIHR LK R +++GRVGATAAVY+AAILEYLTAEVLELAGNASKDLKVKRITPR
Sbjct: 40 IQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPR 99
Query: 288 HLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 395
HLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 100 HLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 135
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 151 bits (366), Expect = 2e-37
Identities = 75/83 (90%), Positives = 78/83 (93%)
Frame = +3
Query: 114 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 293
FPVGRIHR LK RT ++GRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL
Sbjct: 65 FPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 124
Query: 294 QLAIRGDEELDSLIKATIAGGGV 362
QLAIRGDEELD+LIK TIAGG V
Sbjct: 125 QLAIRGDEELDTLIKGTIAGGVV 147
>12_02_0605 - 20924385-20924606,20924705-20924899
Length = 138
Score = 123 bits (297), Expect = 5e-29
Identities = 64/100 (64%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
Frame = +3
Query: 108 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 287
LQFPVGRI R+LK + RVGA A VY +A+LEYL AEVLELAGNA++D K RI PR
Sbjct: 27 LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPR 85
Query: 288 HLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIGKKGG 404
H+QLA+R DEEL L+ A TIA GGV+P+IH++L+ KKGG
Sbjct: 86 HIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGG 125
>12_02_0151 - 14468480-14468698,14468902-14469090
Length = 135
Score = 119 bits (287), Expect = 9e-28
Identities = 64/100 (64%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +3
Query: 108 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 287
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPR 83
Query: 288 HLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 404
H+QLA+R DEEL L+ ATIA GGV+P+IH+ L+ KK G
Sbjct: 84 HIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 123
>07_03_0790 + 21536389-21536577,21536854-21537072
Length = 135
Score = 119 bits (287), Expect = 9e-28
Identities = 64/100 (64%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +3
Query: 108 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 287
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPR 83
Query: 288 HLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 404
H+QLA+R DEEL L+ ATIA GGV+P+IH+ L+ KK G
Sbjct: 84 HIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 123
>03_05_0949 + 29089293-29089487,29089592-29089810
Length = 137
Score = 118 bits (285), Expect = 1e-27
Identities = 62/105 (59%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Frame = +3
Query: 108 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 287
LQFPVGRI R+LK + RVGA A VY +A+LEYL AEVLELAGNA++D K RI PR
Sbjct: 27 LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPR 85
Query: 288 HLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPRAPV 419
H+QLA+R DEEL L+ TIA GGV+P+I + L+ KKGG + +
Sbjct: 86 HIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPKKGGGKGDI 130
>07_03_0791 + 21539069-21539257,21539493-21539711
Length = 135
Score = 118 bits (283), Expect = 3e-27
Identities = 64/103 (62%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = +3
Query: 108 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 287
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPR 83
Query: 288 HLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPRA 413
H+QLA+R DEEL L+ TIA GGV+P+IH L+ KK G A
Sbjct: 84 HIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAGGSA 126
>05_05_0119 - 22512228-22512500,22512577-22512795
Length = 163
Score = 112 bits (269), Expect = 1e-25
Identities = 62/103 (60%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Frame = +3
Query: 108 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 287
LQFPVGRI R+LK S R+G A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 35 LQFPVGRIGRYLKQGRYSQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPR 93
Query: 288 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGGPRA 413
H+ LAIR DEEL L+ TIA GGV+P+I+ L+ KK G A
Sbjct: 94 HVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTGSAA 136
>03_02_0562 - 9469263-9469517,9469619-9469843
Length = 159
Score = 109 bits (263), Expect = 7e-25
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Frame = +3
Query: 108 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 287
LQFPVGRI R+LK + R+G A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 37 LQFPVGRIGRYLKKGRYAQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPR 95
Query: 288 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGGPRA 413
H+ LAIR DEEL L+ TIA GGV+P+I+ L+ KK +A
Sbjct: 96 HVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKA 138
>05_01_0107 + 706936-707202,707231-707485
Length = 173
Score = 93.1 bits (221), Expect = 8e-20
Identities = 61/120 (50%), Positives = 73/120 (60%), Gaps = 18/120 (15%)
Frame = +3
Query: 108 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAE-----------------VLE 236
LQFPVGRI R+LK + RVG A VY AA+LEYL AE VLE
Sbjct: 34 LQFPVGRIGRYLKKGRYAQ-RVGTGAPVYLAAVLEYLAAEASHCLSLPLPNPSKPSMVLE 92
Query: 237 LAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGGPRA 413
LAGNA++D K RI PRH+ LAIR DEEL L+ TIA GGV+P+I+ L+ KK +A
Sbjct: 93 LAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKA 152
>08_02_0735 + 20564451-20564525,20566346-20566561
Length = 96
Score = 79.8 bits (188), Expect = 8e-16
Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +3
Query: 216 LTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIG 392
L+ +VLELAGNA++D K RI PRH+QLA+R DEEL L+ A TIA GGV+P+IH L+
Sbjct: 22 LSIKVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLP 81
Query: 393 KKGGPRA 413
KK G A
Sbjct: 82 KKAGSSA 88
>02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098
Length = 142
Score = 30.7 bits (66), Expect = 0.51
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 288 HLQLAIRGDEELDSLIKATIAGGG 359
HL L + G EELD L++ I GGG
Sbjct: 37 HLSLGVGGAEELDLLLQVGIGGGG 60
>12_02_0680 + 21903520-21904093,21904474-21905162
Length = 420
Score = 30.3 bits (65), Expect = 0.68
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 141 LKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR-HLQLAIRGDE 317
L +R +SHG A Y A + L GNA + + +TP HL + R D
Sbjct: 52 LHHRGSSHGESRGIRATYPQARYPPMVRLAARLWGNAEAEAGYRVLTPTPHLDMGPRADP 111
Query: 318 ELDSLIKATIAGGG 359
L +A I GG
Sbjct: 112 AL----RAAIQNGG 121
>06_03_0197 + 17794418-17794771,17795040-17795549
Length = 287
Score = 30.3 bits (65), Expect = 0.68
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 364 ITPPPAMVALIRLXXXXSPLMASCKCLGVIRLTFKS 257
ITPP A +A I+ PLM + +GV+ L F+S
Sbjct: 143 ITPPSAFMASIKFRNDKCPLMPAKMPIGVLSLLFQS 178
>11_01_0426 +
3271324-3271377,3272114-3272227,3272475-3272588,
3272677-3272834,3273067-3273157,3273668-3273778
Length = 213
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 285 RHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKK 398
+ + L R DEELD L + GGV IH L+G+K
Sbjct: 141 QQMLLIKRQDEELDELSASVQRIGGVGLTIHDELVGQK 178
>01_06_1695 +
39251266-39252390,39252852-39252983,39253560-39253748,
39253887-39253954,39254080-39254182,39254387-39254509
Length = 579
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 282 PRHLQLAIRGDEELDSLIKATIAGGGVIP 368
PRH+ + G E D L A+ AGG P
Sbjct: 174 PRHVSRVVIGSEVFDRLASASAAGGWAAP 202
>07_03_1555 -
27669981-27670148,27670232-27670315,27670349-27670360,
27670683-27670761,27670840-27671078,27671167-27671260,
27671342-27671484,27671688-27671786,27671870-27671998,
27672123-27672197,27672308-27672520,27672581-27672676,
27673282-27673380,27673600-27673839,27674212-27674322,
27674429-27674626,27674720-27674835,27675076-27675193,
27675761-27675866,27675972-27676030,27676259-27676388,
27676730-27676887,27677672-27677887,27677972-27678082,
27678313-27678472,27679364-27679509,27679603-27679695,
27680610-27680706,27681224-27681294,27681407-27681505,
27682037-27682168,27682287-27682729,27683252-27683564,
27684301-27684549
Length = 1631
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 QSGLTVSSRKNPQTSQK*NYKSRSCR-SYGSSLFCCYSGISNSRGFRVSGKCI 253
Q+GL +S+ T+Q + +C YG+S C Y + R +R+S K +
Sbjct: 732 QNGLRMSASIVADTAQCFSTHQFACLIGYGASAICPYLALETCRQWRLSNKTV 784
>07_03_0635 +
20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 243 GNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGG 356
G+ ++ + +T R I+ D E+D+L+KAT+ G
Sbjct: 274 GSGARYDMLSELTRRERNAGIKPDPEIDALMKATVVEG 311
>02_02_0707 + 13144147-13144788,13145115-13148663
Length = 1396
Score = 27.9 bits (59), Expect = 3.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 94 RPERAYSFQ*EESTDISKIELQVTVVSELRQQFILL 201
RP+R S +EST + +EL +TV R + +LL
Sbjct: 967 RPQRITSSLDDESTSVFCLELLITVTLNNRDRIVLL 1002
>01_07_0278 -
42440405-42440515,42440765-42440830,42440995-42441085,
42441342-42441496,42441823-42442044,42442097-42442210,
42442833-42442912,42443289-42443505
Length = 351
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 285 RHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKK 398
R L L + DEELD L ++ GGV IH+ L G++
Sbjct: 257 RQLLLMRQQDEELDELSESVQRIGGVGLTIHEELSGQE 294
>05_06_0015 +
24953918-24954359,24955622-24955857,24955945-24956085,
24956188-24956619,24956847-24956948
Length = 450
Score = 27.1 bits (57), Expect = 6.3
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -2
Query: 410 SWTTFLANERFMYMWNNTSTSNG--GFNQTVKF 318
SW + +MYM NT SNG G NQ F
Sbjct: 307 SWGESWGMKGYMYMHRNTGNSNGVCGINQMPSF 339
>07_03_0898 - 22403337-22404950
Length = 537
Score = 26.6 bits (56), Expect = 8.3
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -3
Query: 334 IRLXXXXSPLMASCKCLGVIRLTFKSFDAFPANSKTSAVRYSRIAAE*TAAVAP 173
+RL + ASC V+ + S + FP + + SAV R AA VAP
Sbjct: 417 LRLAAELASFFASCAAFDVMLMY--SIELFPTSVRNSAVGLVRKAAVLGGVVAP 468
>04_01_0213 - 2692253-2694562
Length = 769
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 10 NSVLHVSKWLVVKRARILVKPRRKLYRDRPERAY 111
+S+L KW +++R+ + + P R +D P +Y
Sbjct: 351 HSLLCSGKWRMIRRSIVSLDPSRFFSKDHPTTSY 384
>01_06_1584 - 38441654-38442847
Length = 397
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -3
Query: 397 FLPMRDLCI-CGITPPPAMVALIRLXXXXSPLMASCKCLGVIRLTF 263
FLP+R L + + P P VA + +M SC +GV+ L +
Sbjct: 243 FLPIRVLLLGFSVLPQPGDVAFEVIIFLSFLMMISCTTVGVLLLVY 288
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 395 LANERFMYMWNNTSTSNGGFNQTVKFFVSSDGK 297
L+ E+ + W N GGF +TV F SSD K
Sbjct: 301 LSPEKILLRWMNFQLKKGGFQRTVTNF-SSDIK 332
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,268,937
Number of Sequences: 37544
Number of extensions: 208595
Number of successful extensions: 628
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -