Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B16
         (426 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.       98   1e-22
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    27   0.37 
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    23   4.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            22   7.9  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    22   7.9  

>Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.
          Length = 107

 Score = 97.9 bits (233), Expect = 1e-22
 Identities = 57/99 (57%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
 Frame = +3

Query: 108 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKD-LKVKRITP 284
           LQFPVGRIHR L+    +  RVG  A VY AA++EYL AEVLELAGN ++D  K +RI P
Sbjct: 8   LQFPVGRIHRLLRKGNYAE-RVGPGAPVYLAAVMEYLAAEVLELAGNRARDNKKERRIIP 66

Query: 285 RHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 398
           R LQLAIR DEE + L+ + TIA GGV+P+I   L+ K+
Sbjct: 67  R-LQLAIRNDEEENKLLRRVTIAQGGVLPNIQAVLLPKR 104


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 26.6 bits (56), Expect = 0.37
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 141 LKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAG 245
           L  R T H RV     ++  A L YL AE+  ++G
Sbjct: 464 LVTRFTDHVRVIEPIFIFVMAYLAYLNAEIFHMSG 498


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 160 LVVLFLRCLWILPTGNCKP 104
           L  LF RCL  +  GNC P
Sbjct: 129 LPYLFNRCLMEVGIGNCPP 147


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 138 HLKNRTTSHGRVGATAA 188
           HLK ++TS G+V  T A
Sbjct: 298 HLKEKSTSAGKVTGTPA 314


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = -2

Query: 230 NLGC*IFQNSSRINCCRSSDTTVTCSSIF 144
           N G     N+ R++CCR   ++      F
Sbjct: 327 NCGRLFISNNGRVSCCRCMKSSTPFGKFF 355


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,920
Number of Sequences: 2352
Number of extensions: 7735
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)