Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B15
(350 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0510 - 16659486-16659564,16659772-16659947,16660464-166607... 116 4e-27
02_03_0270 + 17135464-17135467,17135583-17135655,17136253-171365... 101 2e-22
05_01_0573 - 5083030-5083151,5084639-5084738,5084790-5084829,508... 29 0.78
06_03_1165 - 28106604-28106915 29 1.4
07_03_0037 + 12709014-12709104,12709407-12709612,12710033-127100... 28 2.4
05_07_0165 + 28107093-28108457 28 2.4
02_02_0207 - 7845072-7845102,7845235-7845341,7845444-7845521,784... 28 2.4
01_02_0122 + 11348686-11348948,11350492-11350587,11351513-113515... 28 2.4
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344... 27 3.1
08_01_0342 - 3016705-3016884,3016963-3017031,3017322-3017408,301... 27 4.1
05_05_0226 + 23442971-23443857,23444209-23446324 27 4.1
01_06_1416 - 37174913-37175006,37175299-37175441,37175932-371760... 27 4.1
09_02_0372 + 8070452-8071012,8071114-8071221 24 5.2
12_02_1221 - 27130321-27130491,27130616-27130664,27131120-271311... 27 5.5
11_01_0121 - 948450-948904,949073-949224,949389-949449,950201-95... 27 5.5
10_01_0316 + 3479574-3482679,3482766-3483127 27 5.5
05_03_0652 + 16606987-16607443,16607542-16607652,16609317-16609411 27 5.5
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 27 5.5
10_01_0049 - 668482-669283,669596-670131,670235-670452,670554-67... 26 7.2
02_04_0094 + 19664434-19665078 26 7.2
12_02_0338 - 17712076-17712261,17712339-17712431,17712533-177125... 26 9.6
11_02_0133 + 8661030-8661141,8661727-8662031,8662158-8662331,866... 26 9.6
11_01_0639 - 5128139-5128159,5128237-5128329,5128431-5128491,512... 26 9.6
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 26 9.6
10_01_0355 + 3912019-3913046,3914354-3914678 26 9.6
06_03_0299 + 19281175-19281570 26 9.6
05_04_0092 + 17851085-17851346,17852778-17852860,17853891-178539... 26 9.6
04_01_0473 + 6175882-6176125,6176458-6176539,6176798-6176907,617... 26 9.6
02_05_0713 + 31159574-31160764 26 9.6
02_02_0401 + 9847398-9847463,9848916-9849019,9849873-9849876,984... 26 9.6
01_06_1536 + 38075023-38075359,38075834-38075963,38076204-380764... 26 9.6
01_06_1219 - 35490475-35491635 26 9.6
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 26 9.6
>04_03_0510 -
16659486-16659564,16659772-16659947,16660464-16660797,
16661564-16661636,16661780-16661783
Length = 221
Score = 116 bits (280), Expect = 4e-27
Identities = 58/115 (50%), Positives = 76/115 (66%), Gaps = 8/115 (6%)
Frame = +3
Query: 9 VVVDATPFRQWYESHYLLPLGRKKGAKLT--------EAEEAIINKKRSQKTAKKYLSRQ 164
V VDA PF+QWY +HY + +GRKK A E E A K+S +K RQ
Sbjct: 103 VQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKDAAEGQEGEAATEEAKKSNHVVRKLEKRQ 162
Query: 165 RLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYILEGQELEFYLSEDQIQEGK 329
+ ++ +EEQF +GRLLAC++SRPGQCGRADGYILEG+ELEFY+ + Q ++GK
Sbjct: 163 QTRTLDSHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
>02_03_0270 +
17135464-17135467,17135583-17135655,17136253-17136583,
17136916-17136969,17137219-17137394,17137607-17137685
Length = 238
Score = 101 bits (242), Expect = 2e-22
Identities = 58/132 (43%), Positives = 77/132 (58%), Gaps = 25/132 (18%)
Frame = +3
Query: 9 VVVDATPFRQWYESHYLLPLGRKKGA-------------------------KLTEAEEAI 113
V VDA PF+QWY +HY + +GRKK A K +AE
Sbjct: 103 VQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKDAEHALGKIRCLFIGLYVMLKGQDAEATT 162
Query: 114 INKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYILEGQELE 293
K+S +K RQ+ ++ +EEQF +GRLLAC++SRPGQCGRADGYILEG+ELE
Sbjct: 163 EEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELE 222
Query: 294 FYLSEDQIQEGK 329
FY+ + Q ++GK
Sbjct: 223 FYMKKLQRKKGK 234
>05_01_0573 -
5083030-5083151,5084639-5084738,5084790-5084829,
5085122-5085567
Length = 235
Score = 29.5 bits (63), Expect = 0.78
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 176 GRGWSGGAIPHWTAVS 223
G GW GG+ HW++VS
Sbjct: 65 GNGWQGGSTDHWSSVS 80
>06_03_1165 - 28106604-28106915
Length = 103
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 140 SEEVPEQAAPVQGRGWSGGAIPHWTAVSMCGESARSVRS 256
+++V +A PV +GGA + + CG +ARS RS
Sbjct: 48 AKQVTGRAVPVSLSSQTGGAAASSSPAAACGRAARSKRS 86
>07_03_0037 +
12709014-12709104,12709407-12709612,12710033-12710097,
12710143-12710404,12711332-12711448,12711779-12712056,
12712304-12712406
Length = 373
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 179 RGWSGGAIPHWTAVSMCGESARSVRSRRWLHFGRSRAGVLPK*RSNPRGQ 328
+GW G + P +C ESA S R+ G SR V+ + NP GQ
Sbjct: 12 QGWEGCSEP-----PICSESAERNGSSRFTTKGTSRVRVMMLRQKNPGGQ 56
>05_07_0165 + 28107093-28108457
Length = 454
Score = 27.9 bits (59), Expect = 2.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 207 CGIAPPDHPLPWTGAACS 154
C +PPD+ LPW AA S
Sbjct: 248 CTYSPPDYGLPWADAAVS 265
>02_02_0207 -
7845072-7845102,7845235-7845341,7845444-7845521,
7845966-7846169,7846389-7846445,7846513-7846578,
7847976-7848020,7848129-7848170,7848563-7848649,
7848830-7848919,7849226-7849431,7849565-7849604
Length = 350
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 140 SEEVPEQAAPVQGRGWSGGAIPHWTAVSMCGESARSVRSRRW 265
S+EV AA + GW G + HW +R RRW
Sbjct: 16 SDEVAAPAALPRRGGWEGHSEDHWQPCRGIQWVRERLRGRRW 57
>01_02_0122 +
11348686-11348948,11350492-11350587,11351513-11351524,
11354009-11354699
Length = 353
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 116 KQKTQSKDSEEVPEQAAPVQGRGWSGGAIPHWTAVS 223
K +T+ KD PE A G G GG I + +A S
Sbjct: 192 KTRTKEKDKAPAPEAAHNDDGGGGGGGGIDNVSAAS 227
>04_04_0466 +
25433678-25434007,25434118-25434176,25434345-25434426,
25435024-25435122,25435750-25435831,25436759-25436823,
25437241-25438308,25438369-25438446,25438550-25438596,
25438734-25438779,25438871-25438950,25439050-25439166,
25439842-25439923,25440156-25440281,25440415-25440489,
25440743-25440868,25441542-25441646
Length = 888
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 152 PEQAAPVQGRGWSGGAIPHWTAVSMCGESARSVRSRRW 265
P AA V GRG S + + A + AR R RRW
Sbjct: 18 PLAAASVSGRGRSPSSASSYRAAARWWPGARRGRRRRW 55
>08_01_0342 -
3016705-3016884,3016963-3017031,3017322-3017408,
3017603-3017650,3017783-3017873,3018243-3018322,
3018429-3018533,3019457-3019551,3019710-3019788,
3020214-3020402
Length = 340
Score = 27.1 bits (57), Expect = 4.1
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -1
Query: 155 QVLLRC----LLTAFFVYDGFLSLSELGTFLPSEWQQVVAFIPL 36
Q+LL C LL F Y GFL L T + EWQ VV + L
Sbjct: 246 QLLLLCPVLFLLQGFEGYVGFLLLRTAHTGIVPEWQVVVCGVLL 289
>05_05_0226 + 23442971-23443857,23444209-23446324
Length = 1000
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 105 EAIINKKRSQK-TAKKYLSRQRLSKVEGGLEEQFHTGRLLACVAS 236
E ++NK SQ AK RL FH+G L CVAS
Sbjct: 521 EFLLNKSLSQIFIAKSSRDHPRLGVNTNACHLSFHSGELTECVAS 565
>01_06_1416 -
37174913-37175006,37175299-37175441,37175932-37176027,
37177125-37177364,37177456-37177812,37178020-37178097,
37178387-37178434,37179406-37179675,37179954-37180054,
37180452-37180605
Length = 526
Score = 27.1 bits (57), Expect = 4.1
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -1
Query: 245 TGPTRHTC*QPSSVELLLQTTLYLGQALPAQVLLRCLLTAFFVYDGFLSLSELGTFLPSE 66
+G R+TC + + L QT L + L + RC L+ Y +LS L + P E
Sbjct: 437 SGCVRYTCMRKKADNLRQQTLHQLRRILTTRQAARCFLSIGEYYRRLRALSNLWSSRPRE 496
>09_02_0372 + 8070452-8071012,8071114-8071221
Length = 222
Score = 23.8 bits (49), Expect(2) = 5.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 180 EGGLEEQFHTGRLLACVASRP 242
E L+E+ H+G LL+CV P
Sbjct: 130 EEPLQEEKHSGHLLSCVELFP 150
Score = 21.4 bits (43), Expect(2) = 5.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 90 LTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQ 200
L E EE +++K ++LSR L + +EEQ
Sbjct: 71 LMEEEEIDEESLQAEKHPSRHLSRVDLFPLAAPMEEQ 107
>12_02_1221 -
27130321-27130491,27130616-27130664,27131120-27131188,
27131845-27131939,27132032-27132121,27132885-27132968,
27133122-27133211,27133310-27133624,27134184-27134399,
27134736-27134774,27135337-27135408
Length = 429
Score = 26.6 bits (56), Expect = 5.5
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 60 LPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVAS 236
L +K+ A+ + A INKK ++Y+S ++ G +Q++ G + C S
Sbjct: 337 LEKAKKELAESIQKGVAFINKKSYIVKRREYISSNQVGCCFHGRRKQYYLGSKVTCFGS 395
>11_01_0121 -
948450-948904,949073-949224,949389-949449,950201-950336,
951042-951376,952523-952577
Length = 397
Score = 26.6 bits (56), Expect = 5.5
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 146 EVPEQAAPVQGRGWSGGAIPHWTAVSMCGESARSVRSRRWLHFGRSRAGVLPK*RSNP 319
+V E P+QG G S GA+ S+ G S R R L R LP + +P
Sbjct: 337 DVVETLEPLQGSGGSDGAVQ-----SVLGSGLPSYRVNRRLMTNRVHCRALPNPKCSP 389
>10_01_0316 + 3479574-3482679,3482766-3483127
Length = 1155
Score = 26.6 bits (56), Expect = 5.5
Identities = 20/79 (25%), Positives = 36/79 (45%)
Frame = -1
Query: 275 QNVTIGATALTGPTRHTC*QPSSVELLLQTTLYLGQALPAQVLLRCLLTAFFVYDGFLSL 96
Q + I L+GP H+ +E+L + L +P+Q L +++ V +S
Sbjct: 701 QGLNISNNRLSGPIPHSLGNLQKLEVLDLSNNSLSGPIPSQ--LSNMISLSVVN---ISF 755
Query: 95 SELGTFLPSEWQQVVAFIP 39
+EL LP W ++ +P
Sbjct: 756 NELSGQLPDGWDKIATRLP 774
>05_03_0652 + 16606987-16607443,16607542-16607652,16609317-16609411
Length = 220
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 134 LTAFFVYDGFLSLSELGTFLP 72
L+ FFV+DGFL++ + F P
Sbjct: 200 LSCFFVFDGFLTVKKYHIFSP 220
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 104 GSHHKQKTQSKDSEEVPEQAAPVQGRGWS 190
G H K++ +++D EE E+ APV + S
Sbjct: 437 GGHKKKRRKNEDDEEEEERNAPVSRKSKS 465
>10_01_0049 -
668482-669283,669596-670131,670235-670452,670554-670653,
670706-670855
Length = 601
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 177 VEGGLEEQFHTGRLLACVASRPGQCGRADGYILEGQELEFYLSEDQIQ 320
V+G + HTG+ AC + G+ A Y G L YL++ Q Q
Sbjct: 63 VKGNPASKTHTGKWKACYSILGGEFCGALAYYAVGTNLVSYLTKVQGQ 110
>02_04_0094 + 19664434-19665078
Length = 214
Score = 26.2 bits (55), Expect = 7.2
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +2
Query: 14 GGCHTFQAVV*KPLPAATRK---EERCQAH*G*GSHHKQKTQSKDSEEVPEQAAPVQGRG 184
GG T +AVV LPAA RK E + G + + + + D+ EV E +P
Sbjct: 109 GGGGTAKAVVIAGLPAAARKASREHERRRRLG-RARARARVFAGDAVEVAEPGSPKV--S 165
Query: 185 WSGGAIPHWTAVSMCGESARSVRSRRW 265
GG A C +A + RRW
Sbjct: 166 CLGGVRSRARAQQPCCPAAAAAGRRRW 192
>12_02_0338 -
17712076-17712261,17712339-17712431,17712533-17712593,
17712681-17712791,17712872-17713123,17713207-17714543,
17714649-17715317,17715403-17715642
Length = 982
Score = 25.8 bits (54), Expect = 9.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3
Query: 291 PALDLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLP 175
P L P +R TD+AD P M PP+ LP
Sbjct: 506 PGLGKPPRPPKRKVTDKADDPEMQKENPVPEVPPEIALP 544
>11_02_0133 +
8661030-8661141,8661727-8662031,8662158-8662331,
8662469-8662783,8662886-8663456,8663474-8663786,
8663870-8663968,8664202-8664315,8664403-8664463,
8664565-8664657,8664742-8664927
Length = 780
Score = 25.8 bits (54), Expect = 9.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3
Query: 291 PALDLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLP 175
P L P +R TD+AD P M PP+ LP
Sbjct: 360 PGLGKPPRPPKRKVTDKADDPEMQKENPVPEVPPEIALP 398
>11_01_0639 -
5128139-5128159,5128237-5128329,5128431-5128491,
5128579-5128689,5128770-5129021,5129105-5129440,
5129486-5131140,5131316-5131555
Length = 922
Score = 25.8 bits (54), Expect = 9.6
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -3
Query: 291 PALDLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLPWT 169
P L P +R TD+AD P M PP+ LP T
Sbjct: 516 PGLGKPPRPPKRKVTDKADDPEMDKENPVPEVPPEIALPET 556
>11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/61 (26%), Positives = 20/61 (32%)
Frame = -3
Query: 291 PALDLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLPWTGAACSGTSSLSFDCVFCL* 112
PA+D DR P L CG+ H PW + S + C C
Sbjct: 1824 PAIDSASDEVACDRCKNPQPPPDLKCAVCGLQMHRHCSPWEDGE-QPSDSADWSCGACRE 1882
Query: 111 W 109
W
Sbjct: 1883 W 1883
>10_01_0355 + 3912019-3913046,3914354-3914678
Length = 450
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 214 RPVWNCSSRPPSTLDRRCLLRYF 146
R + CSS PS D C++RYF
Sbjct: 219 RDAFKCSSFVPSGDDLLCVIRYF 241
>06_03_0299 + 19281175-19281570
Length = 131
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = -3
Query: 291 PALDLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLPWTGAACSGTS 145
P LD P+ R A PH++ C A P+ + A +G +
Sbjct: 6 PRLDYPRSRRLRPTVRLAQLPHVVIESPCNNAMGHRPIAYKTAIPAGVT 54
>05_04_0092 +
17851085-17851346,17852778-17852860,17853891-17853942,
17854054-17854179,17854291-17854373,17855127-17855309,
17855731-17855947,17856156-17856299,17856375-17856446,
17857166-17857230,17857517-17857584,17857968-17858007,
17858843-17859013
Length = 521
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 104 GSHHKQKTQSKDSEEVPEQAAPVQ 175
G+ QKT +++S+E ++A+PVQ
Sbjct: 413 GTKFTQKTAARNSQEKTDRASPVQ 436
>04_01_0473 +
6175882-6176125,6176458-6176539,6176798-6176907,
6177234-6177388,6177473-6178212,6178298-6178549,
6178960-6178993,6179071-6179253,6179533-6179637
Length = 634
Score = 25.8 bits (54), Expect = 9.6
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 303 LGRTPALDLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLP 175
LG L P H+R+ TD+A+ P M PP+ +P
Sbjct: 191 LGDAVDLGKPLRPHKREVTDKAEEPEMHKENLVPEVPPEIAVP 233
>02_05_0713 + 31159574-31160764
Length = 396
Score = 25.8 bits (54), Expect = 9.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 228 VASRPGQCGRADGYILEGQELEFYLSEDQIQEGKVICVKYK 350
VA +PG+ G L+G+ +I EGK IC K K
Sbjct: 310 VALQPGRNKNGVGSRLKGRATGISSVNAEIMEGKRICAKSK 350
>02_02_0401 +
9847398-9847463,9848916-9849019,9849873-9849876,
9849968-9851230
Length = 478
Score = 25.8 bits (54), Expect = 9.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 156 SRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYILEGQEL 290
S+ SK +G +E L AC+ S+ G + DG E Q L
Sbjct: 227 SKGASSKCDGSSDENKLLSDLRACLKSKQGASSKCDGSSGENQLL 271
>01_06_1536 +
38075023-38075359,38075834-38075963,38076204-38076419,
38076520-38077137,38077226-38078075
Length = 716
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -3
Query: 321 LGFDLHLGRTPALDLPK-CNHRRDRTDRADSPHMLTAVQCGIAPPDHPLPWT 169
+G H LD + H T RA L +V+C I DHP +T
Sbjct: 480 IGASSHSAAAKILDCKQFIKHYDQHTPRAPLNPFLLSVRCSIELLDHPKDYT 531
>01_06_1219 - 35490475-35491635
Length = 386
Score = 25.8 bits (54), Expect = 9.6
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 63 PLGRKKGAKLTEAEEAIINKKRSQKTAKKYLS--RQRLSKVEGGLEEQFHTGRLLACVAS 236
P G K+ + +A +KKY + R+ LSK+ GL +G V S
Sbjct: 298 PRGEKRSREEWQAASRGWGVSSLLDASKKYCTDARKALSKLSIGLGTDSGSGSGSPRVGS 357
Query: 237 RPGQCGRAD 263
R +CG+ D
Sbjct: 358 RERKCGKQD 366
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = -3
Query: 294 TPALDLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLP 175
TP R ++ +SPH + G APP PLP
Sbjct: 96 TPPPSSAPSGGRATSSEARESPHATSVDDGGRAPPPPPLP 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,714,353
Number of Sequences: 37544
Number of extensions: 261122
Number of successful extensions: 950
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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