Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B15
(350 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal prote... 139 4e-34
Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical pr... 31 0.31
U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein. 31 0.31
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 29 1.2
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 29 1.2
Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical pr... 28 1.6
U88315-4|AAB42369.3| 778|Caenorhabditis elegans Hypothetical pr... 28 1.6
AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal ... 28 1.6
Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical p... 28 2.2
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 27 3.8
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 26 6.6
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 26 6.6
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 26 6.6
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z29115-3|CAA82361.1| 347|Caenorhabditis elegans Hypothetical pr... 26 6.6
U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical pr... 26 6.6
U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical pr... 26 6.6
U00046-2|AAN65304.1| 860|Caenorhabditis elegans Temporarily ass... 26 6.6
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 26 6.6
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 26 6.6
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 26 6.6
AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical ... 26 6.6
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 26 6.6
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 26 6.6
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 26 6.6
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 26 8.7
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 26 8.7
U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical pr... 26 8.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 26 8.7
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 26 8.7
AC024798-4|AAK29922.1| 401|Caenorhabditis elegans Pip kinase pr... 26 8.7
>U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 8 protein.
Length = 208
Score = 139 bits (337), Expect = 4e-34
Identities = 64/107 (59%), Positives = 83/107 (77%)
Frame = +3
Query: 9 VVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGG 188
+ VDA PFRQWYE+HY LPL RKK AKL+E + AI+NKKRS T KKY RQ+ + V+
Sbjct: 102 ISVDAAPFRQWYEAHYALPLARKKNAKLSEEDNAILNKKRSHHTMKKYTERQKTAAVDAL 161
Query: 189 LEEQFHTGRLLACVASRPGQCGRADGYILEGQELEFYLSEDQIQEGK 329
L EQF+TGRLLA ++S PGQ G+A+GYILEG+EL+FYL + + ++ K
Sbjct: 162 LIEQFNTGRLLARISSSPGQVGQANGYILEGKELDFYLRKIRAKKAK 208
>Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical
protein E02H4.1 protein.
Length = 664
Score = 30.7 bits (66), Expect = 0.31
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 210 QCGIAPPDHPLPWTGAA-CSGTSSLSFDCV 124
+CG A P +P PW +A C T++ + +C+
Sbjct: 486 KCGCADPRYPKPWKRSAWCDSTNTTTLNCL 515
>U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein.
Length = 664
Score = 30.7 bits (66), Expect = 0.31
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 210 QCGIAPPDHPLPWTGAA-CSGTSSLSFDCV 124
+CG A P +P PW +A C T++ + +C+
Sbjct: 486 KCGCADPRYPKPWKRSAWCDSTNTTTLNCL 515
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 288 ALDLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLP 175
+L + + H D TDR TA+ G+ PDH P
Sbjct: 164 SLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPDHIQP 201
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 288 ALDLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLP 175
+L + + H D TDR TA+ G+ PDH P
Sbjct: 166 SLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPDHIQP 203
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 288 ALDLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLP 175
+L + + H D TDR TA+ G+ PDH P
Sbjct: 166 SLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPDHIQP 203
>Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical
protein F26D2.2 protein.
Length = 489
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 87 KLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRL 218
K+T ++AI ++ + KK L + + SK E LEE+ +L
Sbjct: 331 KITSLKKAIAKEQEKLEKGKKELEQLQSSKTESDLEEEISAMQL 374
>U88315-4|AAB42369.3| 778|Caenorhabditis elegans Hypothetical
protein C37H5.5 protein.
Length = 778
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +3
Query: 72 RKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEE 197
+K G A++ I K+++ KTAKKY +++L+++E L E
Sbjct: 424 KKSGKDALIAKKYQIKKEKASKTAKKY--KKQLARLEADLLE 463
>AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal
complex protein SYP-1 protein.
Length = 489
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 87 KLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRL 218
K+T ++AI ++ + KK L + + SK E LEE+ +L
Sbjct: 331 KITSLKKAIAKEQEKLEKGKKELEQLQSSKTESDLEEEISAMQL 374
>Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical
protein C39E9.11 protein.
Length = 405
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 75 KKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEE 197
KK K + EE +K+ +K AKK + +++ K+ GG+++
Sbjct: 79 KKALKKAQKEE----RKKEKKLAKKAMKVEKIPKIGGGIQK 115
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.1 bits (57), Expect = 3.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 10 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS*TKNAVKRQRRST*AG 162
S + PHLS S K T HS+ + PSS +KPS + + R R + G
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPSYSGSYSARSRGGSSTG 810
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.1 bits (57), Expect = 3.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 10 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS*TKNAVKRQRRST*AG 162
S + PHLS S K T HS+ + PSS +KPS + + R R + G
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPSYSGSYSARSRGGSSTG 810
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 317 DLIFT*VELQLLTFQNVTIGATALTGPTRHT 225
+L F E Q LTF +T+ T T P HT
Sbjct: 160 ELYFPDSEGQALTFGEITVTCTESTTPDNHT 190
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 10 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 114
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 794
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 10 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 114
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 629 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 660
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 10 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 114
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 794
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 10 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 114
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 794
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 10 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 114
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 629 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 660
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 10 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 114
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 794
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 10 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 114
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 343 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 374
>Z29115-3|CAA82361.1| 347|Caenorhabditis elegans Hypothetical
protein T26G10.4 protein.
Length = 347
Score = 26.2 bits (55), Expect = 6.6
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 75 KKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCG 254
KK A L +A E N+K + K + R +V L+ +FHT +L+ SR Q
Sbjct: 257 KKLAVLVQATEDS-NEKLFTEDGVKKMQRAMNEQVSRALKHRFHTTKLVKSEISRVVQMH 315
Query: 255 RADG-YILEGQEL 290
A ++ G L
Sbjct: 316 PASNKFVARGGNL 328
>U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical
protein R05G6.2 protein.
Length = 339
Score = 26.2 bits (55), Expect = 6.6
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = -1
Query: 281 TFQNVT-IGATALTGPTRHTC*QPSSVELLLQTTLYL-GQALPAQVLLRCLLTAFFVYDG 108
TFQ + +G T L P P+ L L + Y+ + + L+ L+ FF
Sbjct: 252 TFQKLQDLGWTVLPHPPYSPDLAPTDYHLFLSLSDYMRDKQFDDEEHLKTELSTFFSSRS 311
Query: 107 FLSLSELGTFLPSEWQQVV 51
S LPS+WQQVV
Sbjct: 312 PDFFSRGIMMLPSKWQQVV 330
>U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical
protein C54G7.4 protein.
Length = 1199
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/27 (33%), Positives = 20/27 (74%)
Frame = +3
Query: 267 YILEGQELEFYLSEDQIQEGKVICVKY 347
+ LE ++LE L++ + Q+ +++C+KY
Sbjct: 166 HCLEAEDLEQALAKKEHQKEEIVCLKY 192
>U00046-2|AAN65304.1| 860|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform c protein.
Length = 860
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 48 SHYLLPLGRKKGAKLTEAEEAIINKKRS-QKTAKKYLSRQRLSKVEGGLEEQF 203
SH LP+G G +++E +I+N R +++Y+S + V L E+F
Sbjct: 560 SHPFLPIGYLGGIEISEISVSILNNGRPLDLYSERYMSISPEAVVRLELNEKF 612
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily assigned
gene nameprotein 152, isoform a protein.
Length = 2560
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 48 SHYLLPLGRKKGAKLTEAEEAIINKKRS-QKTAKKYLSRQRLSKVEGGLEEQF 203
SH LP+G G +++E +I+N R +++Y+S + V L E+F
Sbjct: 2231 SHPFLPIGYLGGIEISEISVSILNNGRPLDLYSERYMSISPEAVVRLELNEKF 2283
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 10 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 114
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 794
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 26.2 bits (55), Expect = 6.6
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = -1
Query: 281 TFQNVT-IGATALTGPTRHTC*QPSSVELLLQTTLYL-GQALPAQVLLRCLLTAFFVYDG 108
TFQ + +G T L P P+ L L + Y+ + + L+ L+ FF
Sbjct: 227 TFQKLQDLGWTVLPHPPYSPDLAPTDYHLFLSLSDYMRDKQFDDEEHLKTELSTFFSSRS 286
Query: 107 FLSLSELGTFLPSEWQQVV 51
S LPS+WQQVV
Sbjct: 287 PDFFSRGIMMLPSKWQQVV 305
>AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical
protein Y18H1A.2 protein.
Length = 270
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 72 RKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGR 215
RK+ + +++EE + + K KK R R S E LEE++ R
Sbjct: 159 RKRKREDSDSEEKAKKRHKKDKKKKKKKHRHRDSSEERQLEEEYDRER 206
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 26.2 bits (55), Expect = 6.6
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = -1
Query: 281 TFQNVT-IGATALTGPTRHTC*QPSSVELLLQTTLYL-GQALPAQVLLRCLLTAFFVYDG 108
TFQ + +G T L P P+ L L + Y+ + + L+ L+ FF
Sbjct: 252 TFQKLQDLGWTVLPHPPYSPDLAPTDYHLFLSLSDYMRDKQFDDEEHLKTELSTFFSSRS 311
Query: 107 FLSLSELGTFLPSEWQQVV 51
S LPS+WQQVV
Sbjct: 312 PDFFSRGIMMLPSKWQQVV 330
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 48 SHYLLPLGRKKGAKLTEAEEAIINKKRS-QKTAKKYLSRQRLSKVEGGLEEQF 203
SH LP+G G +++E +I+N R +++Y+S + V L E+F
Sbjct: 2173 SHPFLPIGYLGGIEISEISVSILNNGRPLDLYSERYMSISPEAVVRLELNEKF 2225
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 48 SHYLLPLGRKKGAKLTEAEEAIINKKRS-QKTAKKYLSRQRLSKVEGGLEEQF 203
SH LP+G G +++E +I+N R +++Y+S + V L E+F
Sbjct: 2355 SHPFLPIGYLGGIEISEISVSILNNGRPLDLYSERYMSISPEAVVRLELNEKF 2407
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 67 SEGRKVPSSLRLRKPS*TKNAVKRQRRST*AGSACPR*R 183
S + P+ R R PS +K+ R+RRS PR R
Sbjct: 429 SRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRRR 467
>Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical
protein F25D1.4 protein.
Length = 882
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 119 VYDGFLSLSELGTFLPSEWQ 60
V+ G LS SE+ + LPS+W+
Sbjct: 395 VFGGKLSSSEIVSMLPSDWE 414
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -3
Query: 327 CPLGFDLHLGRTPALDLPKCNHRRDRTDRADSPHMLTAVQC 205
CP ++L R KCNH D D +D +AV C
Sbjct: 2834 CPEDYNLCTNRRCIDSAKKCNHIDDCGDGSDELDCPSAVAC 2874
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 308 FT*VELQLLTFQNVTIGATALTGPTRHT 225
F E Q+LTF +T+ T T P HT
Sbjct: 291 FPDTEGQVLTFGEITVTCTESTTPDNHT 318
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 183 GGLEEQFHTGRLLACVASRPGQCGRADGYILEGQELEFYLSEDQIQEGKV 332
GG EE+F GR A+ G + E +E+E Y SE++ E V
Sbjct: 3098 GGSEEEFSIGRARGMAAASSGYQHSSS----ENREVEEYCSEEEDVEHSV 3143
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 183 GGLEEQFHTGRLLACVASRPGQCGRADGYILEGQELEFYLSEDQIQEGKV 332
GG EE+F GR A+ G + E +E+E Y SE++ E V
Sbjct: 3682 GGSEEEFSIGRARGMAAASSGYQHSSS----ENREVEEYCSEEEDVEHSV 3727
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 183 GGLEEQFHTGRLLACVASRPGQCGRADGYILEGQELEFYLSEDQIQEGKV 332
GG EE+F GR A+ G + E +E+E Y SE++ E V
Sbjct: 3098 GGSEEEFSIGRARGMAAASSGYQHSSS----ENREVEEYCSEEEDVEHSV 3143
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 183 GGLEEQFHTGRLLACVASRPGQCGRADGYILEGQELEFYLSEDQIQEGKV 332
GG EE+F GR A+ G + E +E+E Y SE++ E V
Sbjct: 3682 GGSEEEFSIGRARGMAAASSGYQHSSS----ENREVEEYCSEEEDVEHSV 3727
>U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical
protein B0507.6 protein.
Length = 857
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 72 RKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVA 233
+KK + +E + + KK+ ++ KK + K++ L E+F+ +++C+A
Sbjct: 475 KKKLQEQSERNKIELEKKKQERMNKKRKFEDEIRKLKNELIERFN--MIMSCIA 526
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -3
Query: 327 CPLGFDLHLGRTPALDLPKCNHRRDRTDRADSPHMLTAVQC 205
CP ++L R KCNH D D +D +AV C
Sbjct: 2834 CPEDYNLCTNRRCIDSAKKCNHIDDCGDGSDELDCPSAVAC 2874
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 183 GGLEEQFHTGRLLACVASRPGQCGRADGYILEGQELEFYLSEDQIQEGKV 332
GG EE+F GR A+ G + E +E+E Y SE++ E V
Sbjct: 3682 GGSEEEFSIGRARGMAAASSGYQHSSS----ENREVEEYCSEEEDVEHSV 3727
>AC024798-4|AAK29922.1| 401|Caenorhabditis elegans Pip kinase
protein 2 protein.
Length = 401
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 195 PPDHPLPWTGAACSGTS 145
PPD P+P TG A G S
Sbjct: 307 PPDSPIPSTGGAFPGVS 323
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,061,734
Number of Sequences: 27780
Number of extensions: 184099
Number of successful extensions: 584
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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