Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B13
         (278 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   0.35 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    20   4.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    20   5.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   5.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    19   7.5  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    19   9.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    19   9.9  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    19   9.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    19   9.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    19   9.9  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 0.35
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 94  QCAHFTLFHGCYSY 53
           +C H ++ H CY Y
Sbjct: 84  ECIHLSVLHKCYDY 97


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 77  GEVCTLTCAPEYAY 118
           G   TL   PEYAY
Sbjct: 76  GSFITLVGGPEYAY 89


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 19.8 bits (39), Expect = 5.7
 Identities = 6/29 (20%), Positives = 16/29 (55%)
 Frame = +2

Query: 2   HEVEFELGKETVIKGWDIGVATMKKGEVC 88
           H++  ++GK  V   +D+   + +  ++C
Sbjct: 189 HKIVLDMGKNCVTYVFDLFYLSKRASDLC 217


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 5.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 73  FHGCYSYVPSLYY 35
           FH  Y++ P+ YY
Sbjct: 440 FHNQYAHYPAEYY 452


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 19.4 bits (38), Expect = 7.5
 Identities = 11/58 (18%), Positives = 23/58 (39%)
 Frame = -2

Query: 196 NFPVYQFYLKFQCRFRWYCWRFSTRPIGIFWGTSQCAHFTLFHGCYSYVPSLYYSFFP 23
           NF ++  Y+     F  Y W  S   +G+            ++ C + +  +++S  P
Sbjct: 116 NFAIFNLYMVLLLLFDAYLWISS---VGVRMFQYYIGRSFTYYVCNTTIFLIFHSVLP 170


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 145 YCWRFSTRP 119
           YC R+S RP
Sbjct: 195 YCTRYSDRP 203


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 110 ILGHKSMCTLHPFSW 66
           I GH++ CT +   W
Sbjct: 105 IFGHETSCTRYWTCW 119


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
          protein 15 protein.
          Length = 146

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 85 HFTLFHGCYSYVPSLYY 35
          HF +F    +YV S+ Y
Sbjct: 6  HFLVFGALLTYVSSVEY 22


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -2

Query: 118 IGIFWGTSQCAHFTL 74
           + + WG    A FTL
Sbjct: 250 VALVWGVKDQAEFTL 264


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 188 WKVEDLSPNKNKGI 229
           WKVE+ SP+    +
Sbjct: 109 WKVEEDSPSPTSSV 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,131
Number of Sequences: 336
Number of extensions: 1197
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4684108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)