Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B13
(278 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 85 7e-18
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 48 1e-06
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 48 1e-06
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 44 1e-05
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 40 2e-04
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 33 0.030
AF016448-4|AAY86192.1| 91|Caenorhabditis elegans Hypothetical ... 28 0.86
Z66567-4|CAA91493.2| 618|Caenorhabditis elegans Hypothetical pr... 28 1.1
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 28 1.1
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 28 1.1
AF098986-4|AAY86227.1| 129|Caenorhabditis elegans Hypothetical ... 27 1.5
AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine r... 27 1.5
Z81454-2|CAB03804.2| 346|Caenorhabditis elegans Hypothetical pr... 27 2.6
U29244-18|AAC71099.2| 515|Caenorhabditis elegans Hypothetical p... 27 2.6
AC025716-13|AAL32239.1| 289|Caenorhabditis elegans Serpentine r... 27 2.6
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 26 3.5
Z96048-1|CAB09419.1| 351|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z82051-8|CAB04814.1| 349|Caenorhabditis elegans Hypothetical pr... 25 6.1
AF016422-8|AAW88392.1| 289|Caenorhabditis elegans Serpentine re... 25 6.1
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 85.0 bits (201), Expect = 7e-18
Identities = 40/91 (43%), Positives = 53/91 (58%)
Frame = +2
Query: 5 EVEFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELI 184
+ F LG+ VIKGWD+GVATM KGEV T +Y Y +TL FE+EL
Sbjct: 59 QFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELF 118
Query: 185 DWKVEDLSPNKNKGILRHIIEMGTGDDSPKD 277
+W ED+SP+++ ILR II G+ + P D
Sbjct: 119 EWSAEDISPDRDGTILRTIIVEGSKNSFPND 149
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 47.6 bits (108), Expect = 1e-06
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +2
Query: 11 EFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELI 184
+F++GK VIKGWD GVA M GE LT + + Y +TL FE+EL+
Sbjct: 48 KFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 47.6 bits (108), Expect = 1e-06
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +2
Query: 11 EFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELI 184
+F++GK VIKGWD GVA M GE LT + + Y +TL FE+EL+
Sbjct: 48 KFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 44.4 bits (100), Expect = 1e-05
Identities = 24/60 (40%), Positives = 29/60 (48%)
Frame = +2
Query: 5 EVEFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELI 184
E F LG+ VIKGWD G+ M GE LT P Y S LKF++EL+
Sbjct: 71 EFTFTLGQGNVIKGWDQGLLNMCVGERRILTIPPHLGYGERGAPPKIPGNSVLKFDVELM 130
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 40.3 bits (90), Expect = 2e-04
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 11 EFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAY 118
+F++GK VIKGWD GVA M E LT AP + +
Sbjct: 244 KFKIGKGEVIKGWDQGVAQMSVKEKSKLTIAPAFGF 279
Score = 34.3 bits (75), Expect = 0.013
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 14 FELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAY 118
F++G VI G DIG+ MK GE+ T + +Y Y
Sbjct: 131 FKIGFGEVIPGLDIGIPKMKVGEIATFHVSGKYGY 165
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 33.1 bits (72), Expect = 0.030
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +2
Query: 14 FELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIEL 181
F++G VIKG DI + M +GE + PE AY S L F++ L
Sbjct: 195 FKMGSGQVIKGMDIAMEGMCQGEKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSL 250
>AF016448-4|AAY86192.1| 91|Caenorhabditis elegans Hypothetical
protein F41E6.15 protein.
Length = 91
Score = 28.3 bits (60), Expect = 0.86
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -2
Query: 97 SQCAHFTLFHGCYSYVPSLYYSFFPQF 17
++ ++ L++ YSY P YY ++P +
Sbjct: 32 AEAQYYNLYYPYYSYYPYSYYYYYPSY 58
>Z66567-4|CAA91493.2| 618|Caenorhabditis elegans Hypothetical
protein ZK455.4 protein.
Length = 618
Score = 27.9 bits (59), Expect = 1.1
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 182 IDWKVEDLSPNKNKGILRHII 244
++W +E+L ++NKG L HII
Sbjct: 405 LEWLIEELQDSENKGELVHII 425
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 27.9 bits (59), Expect = 1.1
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +2
Query: 14 FELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIEL 181
F+L VIKG DI + M +GE + ++ Y + L F+I L
Sbjct: 200 FKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITL 255
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 27.9 bits (59), Expect = 1.1
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +2
Query: 14 FELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIEL 181
F+L VIKG DI + M +GE + ++ Y + L F+I L
Sbjct: 236 FKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITL 291
>AF098986-4|AAY86227.1| 129|Caenorhabditis elegans Hypothetical
protein C36C9.6 protein.
Length = 129
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 97 SQCAHFTLFHG-CYSYVPSLYYSFFPQFEFDL 5
S+ +TLFH C+S Y +FFP+ F L
Sbjct: 80 SEIVRYTLFHCFCFSAPLLSYQNFFPEVSFGL 111
>AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine
receptor, class t protein8 protein.
Length = 350
Score = 27.5 bits (58), Expect = 1.5
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = -2
Query: 235 T*NALILIRT*IFNFPVYQFYLKFQCRFRWYCWRFSTRPIGIFWGTSQCAHFTLFHGCYS 56
T N +L+ T + ++L F+ + W + TR IF C + G Y
Sbjct: 200 TVNNWVLLTTITALYFYLSYHLLFKFGYSTSIWLYKTRRQIIFQALMLCVFHGIVCGIYE 259
Query: 55 YVPSLYYS 32
++ +Y+S
Sbjct: 260 FMKYVYFS 267
>Z81454-2|CAB03804.2| 346|Caenorhabditis elegans Hypothetical
protein B0391.4 protein.
Length = 346
Score = 26.6 bits (56), Expect = 2.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 109 FWGTSQCAHFTLFHGCYSYVPSLYYSFFPQFEFDL 5
+W F+GCYS + Y +FF F++ L
Sbjct: 120 YWAVFDTNKLAYFNGCYSLIWFFYCAFF-GFQYSL 153
>U29244-18|AAC71099.2| 515|Caenorhabditis elegans Hypothetical
protein ZK1248.1 protein.
Length = 515
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 155 STLKFEIELIDWKVEDLSPNKNKGILRHIIEMGTGDDS 268
+T K E EL+D +ED+ P GIL+ + +M D+
Sbjct: 272 ATRKAE-ELLDEPIEDIFPQDQAGILKDVWQMFNSFDN 308
>AC025716-13|AAL32239.1| 289|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 64 protein.
Length = 289
Score = 26.6 bits (56), Expect = 2.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 64 CYSYVPSLYYSFFPQFEF 11
C+S +PSL +S FP F
Sbjct: 226 CFSIIPSLIFSTFPSLNF 243
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 26.2 bits (55), Expect = 3.5
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +2
Query: 14 FELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIEL 181
F L VI G DI + M +GE + EY Y + L FEI L
Sbjct: 195 FRLRNREVIDGMDIAMDGMCEGERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVL 250
>Z96048-1|CAB09419.1| 351|Caenorhabditis elegans Hypothetical
protein F57A10.1 protein.
Length = 351
Score = 25.4 bits (53), Expect = 6.1
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -2
Query: 109 FWGTSQCAHFTLFHGCYSYVPSLYYSFF 26
+W FHG Y + YYSFF
Sbjct: 120 YWALFDTPKIKYFHGWYYLIWVSYYSFF 147
>Z82051-8|CAB04814.1| 349|Caenorhabditis elegans Hypothetical
protein T23D5.11 protein.
Length = 349
Score = 25.4 bits (53), Expect = 6.1
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -2
Query: 109 FWGTSQCAHFTLFHGCYSYVPSLYYSFF 26
+W FHG Y + YYSFF
Sbjct: 105 YWALFDTPKIKYFHGWYYLIWVSYYSFF 132
>AF016422-8|AAW88392.1| 289|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 60 protein.
Length = 289
Score = 25.4 bits (53), Expect = 6.1
Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -2
Query: 154 FRWYCWRF-STRPIGIFWGTSQCAHFTLFHGCYSYVPSLYYSFFPQFEFDLV 2
FR++ W F R I T T + +PS +S FP F+ V
Sbjct: 192 FRFFVWNFLKKRNNSISRATKIALLDTFILFTFDLLPSFLFSHFPAINFETV 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,059,727
Number of Sequences: 27780
Number of extensions: 101137
Number of successful extensions: 275
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 248937694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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