Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B13
(278 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g25230.1 68416.m03152 peptidyl-prolyl cis-trans isomerase / F... 71 9e-14
At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase, pu... 69 6e-13
At3g55520.1 68416.m06165 immunophilin, putative / FKBP-type pept... 61 1e-10
At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) / immuno... 50 2e-07
At4g25340.1 68417.m03647 immunophilin-related / FKBP-type peptid... 45 7e-06
At3g54010.2 68416.m05972 peptidyl-prolyl cis-trans isomerase, pu... 39 6e-04
At3g54010.1 68416.m05971 peptidyl-prolyl cis-trans isomerase, pu... 39 6e-04
At3g25220.1 68416.m03150 FK506-binding protein 2-1 (FKBP15-1) / ... 37 0.002
At5g48580.1 68418.m06009 FK506-binding protein 2-2 (FKBP15-2) / ... 35 0.009
At3g12340.1 68416.m01538 immunophilin, putative / FKBP-type pept... 33 0.028
At5g05420.1 68418.m00584 immunophilin, putative / FKBP-type pept... 31 0.11
At3g10060.1 68416.m01206 immunophilin, putative / FKBP-type pept... 27 1.4
At5g45680.1 68418.m05616 FK506-binding protein 1 (FKBP13) identi... 27 1.9
At1g66730.1 68414.m07585 ATP dependent DNA ligase family protein... 26 3.2
At1g75200.1 68414.m08736 flavodoxin family protein / radical SAM... 25 5.7
At1g50430.1 68414.m05652 7-dehydrocholesterol reductase / 7-DHC ... 25 5.7
At1g45160.1 68414.m05177 protein kinase family protein contains ... 25 7.5
At2g45240.1 68415.m05632 methionyl aminopeptidase, putative / me... 25 9.9
At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc f... 25 9.9
At1g16140.1 68414.m01934 wall-associated kinase, putative contai... 25 9.9
>At3g25230.1 68416.m03152 peptidyl-prolyl cis-trans isomerase /
FK506-binding protein (ROF1) identical to rotamase FKBP
(ROF1) GB:U49453 [Arabidopsis thaliana] (Mol. Gen.
Genet. 252 (5), 510-517 (1996))
Length = 551
Score = 71.3 bits (167), Expect = 9e-14
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +2
Query: 11 EFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELIDW 190
+F LG+ VIKGWDIG+ TMKKGE T E AY +TL+F++EL+ W
Sbjct: 85 KFTLGQGQVIKGWDIGIKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQFDVELLKW 144
Query: 191 -KVEDLSPNKNKGILRHIIEMGTGDDSPKD 277
V+D+ K+ G+ + I+ +G ++PKD
Sbjct: 145 DSVKDIC--KDGGVFKKILAVGEKWENPKD 172
Score = 42.3 bits (95), Expect = 5e-05
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +2
Query: 11 EFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXX---XSTLKFEIEL 181
EF+ +E V+ G D V MKKGEV +T PEYA+ ST+ +E++L
Sbjct: 320 EFKTDEEQVVDGLDRAVMKMKKGEVALVTIDPEYAFGSNESQQELAVVPPNSTVTYEVDL 379
Query: 182 IDWKVEDLSPNKN 220
+ + E S + N
Sbjct: 380 LTFDKERESWDMN 392
Score = 39.1 bits (87), Expect = 4e-04
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +2
Query: 59 VATMKKGEVCTLTCAPEYAYX-----XXXXXXXXXXXSTLKFEIELIDWKVEDLSPNKNK 223
V TMKKGE LT P+Y + +TL+ +EL+ WK + NK
Sbjct: 213 VKTMKKGEKVLLTVKPQYGFGEKGKPASAGEGAVPPNATLEINLELVSWKTVSEVTDDNK 272
Query: 224 GILRHIIEMGTGDDSPKD 277
+++ +++ G G + P +
Sbjct: 273 -VVKKVLKEGDGYERPNE 289
>At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative similar to
rof1 [Arabidopsis thaliana] GI:1373396
Length = 578
Score = 68.5 bits (160), Expect = 6e-13
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +2
Query: 11 EFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELIDW 190
+F LG+ VIKGWD+G+ TMKKGE T PE AY +TL+F++ELI W
Sbjct: 93 KFTLGQGHVIKGWDLGIKTMKKGENAIFTIPPELAYGETGSPPTIPPNATLQFDVELIAW 152
Query: 191 K-VEDLSPNKNKGILRHIIEMGTGDDSPKD 277
+ V+D+ + G+ + II G + PKD
Sbjct: 153 RSVKDIC--GDGGVSKKIIVEGEKWEKPKD 180
Score = 46.0 bits (104), Expect = 4e-06
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +2
Query: 11 EFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXX---XSTLKFEIEL 181
EF++ +E VI+G + V MKKGEV +T +PEYA+ ST+ +E+EL
Sbjct: 330 EFKIDEEQVIEGLEKAVMGMKKGEVALITISPEYAFGSSESKQELAVIPPNSTVYYEVEL 389
Query: 182 IDWKVEDLSPNKN 220
+ + E S + N
Sbjct: 390 VSFIKEKESWDMN 402
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +2
Query: 8 VEFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAY------XXXXXXXXXXXXSTLKF 169
VEF + + V TMK+GE LT P+Y + +TL+
Sbjct: 204 VEFTVKEGHFCPALSKAVKTMKRGEKVLLTVKPQYGFGEFGRPASDGLQAAIPPNATLQI 263
Query: 170 EIELIDWKVEDLSPNKNKGILRHIIEMGTGDDSPKD 277
++EL+ WK + ++ +++ I++ G G + P +
Sbjct: 264 DLELVSWKTV-VEVTDDRKVIKKILKEGEGYERPNE 298
>At3g55520.1 68416.m06165 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative POSSIBLE
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE) (EC 5.2.1.8)
(PPIASE) (ROTAMASE) SP:P30416(Mouse);P59 PROTEIN (HSP
BINDING IMMUNOPHILIN), rabbit,
SWISSPROT:P27124:FKB4_RABBIT
Length = 190
Score = 60.9 bits (141), Expect = 1e-10
Identities = 28/57 (49%), Positives = 35/57 (61%)
Frame = +2
Query: 14 FELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELI 184
FELG +VI+ WDI + TMK GEV +TC PEYAY +TL FE+EL+
Sbjct: 62 FELGTGSVIRSWDIALKTMKVGEVAKITCKPEYAYGRAGSPPDIPPDATLIFEVELV 118
>At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) /
immunophilin identical to immunophilin (GI:2104957)
[Arabidopsis thaliana]
Length = 112
Score = 50.4 bits (115), Expect = 2e-07
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 14 FELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXX-XXXXXXXSTLKFEIELI 184
F++GK VIKGWD GV M+ GEV L C+ +YAY S L FEIE++
Sbjct: 52 FQIGKGAVIKGWDEGVIGMQIGEVARLRCSSDYAYGAGGFPAWGIQPNSVLDFEIEVL 109
>At4g25340.1 68417.m03647 immunophilin-related / FKBP-type
peptidyl-prolyl cis-trans isomerase-related immunophilin
FKBP46 - Spodoptera frugiperda (fall
armyworm),PIR2:A55320
Length = 477
Score = 45.2 bits (102), Expect = 7e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 11 EFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELID 187
+F LG +VIKGWD+GV M+ G+ LT P Y S L F++ELI+
Sbjct: 417 KFRLGIGSVIKGWDVGVNGMRVGDKRKLTIPPSMGYGVKGAGGQIPPNSWLTFDVELIN 475
>At3g54010.2 68416.m05972 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative / pasticcino
1-D (PAS1-D) nearly identical to pasticcino 1-D
[Arabidopsis thaliana] GI:3080740
Length = 545
Score = 38.7 bits (86), Expect = 6e-04
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +2
Query: 8 VEFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELID 187
+EF G+ V +G+++ M GE+ +TC P+YAY + +++EIEL+
Sbjct: 232 LEFSSGEGLVPEGFEMCTRLMLPGEIALVTCPPDYAYDKFPRPPGVSEGAHVQWEIELLG 291
Query: 188 WK 193
++
Sbjct: 292 FE 293
>At3g54010.1 68416.m05971 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative / pasticcino
1-D (PAS1-D) nearly identical to pasticcino 1-D
[Arabidopsis thaliana] GI:3080740
Length = 635
Score = 38.7 bits (86), Expect = 6e-04
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +2
Query: 8 VEFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELID 187
+EF G+ V +G+++ M GE+ +TC P+YAY + +++EIEL+
Sbjct: 322 LEFSSGEGLVPEGFEMCTRLMLPGEIALVTCPPDYAYDKFPRPPGVSEGAHVQWEIELLG 381
Query: 188 WK 193
++
Sbjct: 382 FE 383
>At3g25220.1 68416.m03150 FK506-binding protein 2-1 (FKBP15-1) /
immunophilin / peptidyl-prolyl cis-trans isomerase /
rotamase identical to SP|Q38935 FK506-binding protein
2-1 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans
isomerase) (PPiase) (Rotamase) (15 kDa FKBP) (FKBP-15-1)
{Arabidopsis thaliana}, immunophilin (FKBP15-1)
GB:U52046 [Arabidopsis thaliana] (Proc. Natl. Acad. Sci.
U.S.A. 93 (14), 6964-6969 (1996))
Length = 153
Score = 36.7 bits (81), Expect = 0.002
Identities = 25/75 (33%), Positives = 32/75 (42%)
Frame = +2
Query: 8 VEFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELID 187
+EFELG VI GWD G+ GE L + Y +TL F+ EL+
Sbjct: 79 IEFELGTGQVIPGWDQGLLGACVGEKRKLKIPSKLGYGDNGSPPKIPGGATLIFDTELVA 138
Query: 188 WKVEDLSPNKNKGIL 232
E S K+K L
Sbjct: 139 VNGEPSSEAKSKNEL 153
>At5g48580.1 68418.m06009 FK506-binding protein 2-2 (FKBP15-2) /
immunophilin / peptidyl-prolyl cis-trans isomerase /
rotamase identical to SP|Q38936| FK506-binding protein
2-2 precursor (EC 5.2.1.8);
Length = 163
Score = 34.7 bits (76), Expect = 0.009
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +2
Query: 11 EFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELI 184
EF+LG VIKGWD G+ GE L + Y +TL F+ ELI
Sbjct: 80 EFKLGSGQVIKGWDQGLLGACVGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELI 137
>At3g12340.1 68416.m01538 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative contains
Pfam profile: PF00254, FKBP-type peptidyl-prolyl
cis-trans isomerases
Length = 694
Score = 33.1 bits (72), Expect = 0.028
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 8 VEFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELI 184
+ F LG E VI+G IGV M+ G+ L P Y + L +E+E +
Sbjct: 633 LRFRLGGENVIEGLSIGVEGMRVGDKRRLIIPPALGYSKRGLKEKVPKSAWLVYEVEAV 691
>At5g05420.1 68418.m00584 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative contains
similarity to peptidyl-prolyl cis-trans isomerase
Length = 143
Score = 31.1 bits (67), Expect = 0.11
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 11 EFELGKETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELIDW 190
+F L VIKG D+G+ M G LT PE Y S L F++EL++
Sbjct: 84 KFRLDAGKVIKGLDVGLNGMLVGGKRKLTIPPEMGY-GAEGAGSIPPDSWLVFDVELLNV 142
Query: 191 K 193
K
Sbjct: 143 K 143
>At3g10060.1 68416.m01206 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative
Pfam:PF-254: FKBP-type peptidyl-prolyl cis-trans
isomerases
Length = 230
Score = 27.5 bits (58), Expect = 1.4
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 14 FELGKE---TVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELI 184
F++G+ V+KG D+GV M+ G + PE AY +T++ +IEL+
Sbjct: 156 FDVGQSERGNVLKGLDLGVEGMRVGGQRLVIVPPELAY-GKKGVQEIPPNATIELDIELL 214
Query: 185 DWK 193
K
Sbjct: 215 SIK 217
>At5g45680.1 68418.m05616 FK506-binding protein 1 (FKBP13) identical
to Probable FKBP-type peptidyl-prolyl cis-trans
isomerase 3, chloroplast precursor (Ppiase) (Rotamase)
(SP:Q9SCY2) / FK506 binding protein 1 (GI:21535744)
[Arabidopsis thaliana]; contains Pfam PF00254:
peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 208
Score = 27.1 bits (57), Expect = 1.9
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Frame = +2
Query: 14 FELGKETVIKGWD------IGVATMKKGEVCTLTCAPEYAY 118
F +G VIKGWD G+ M G TL PE AY
Sbjct: 138 FRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAY 178
>At1g66730.1 68414.m07585 ATP dependent DNA ligase family protein
contains Pfam profile: PF01068 ATP dependent DNA ligase
domain
Length = 1417
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +2
Query: 110 YAYXXXXXXXXXXXXSTLKFEIELIDWKVEDLSPNKNKGILRHIIEMGTGDDSPK 274
Y Y +L + L D V DL PN KGI + + G D P+
Sbjct: 506 YEYEAELYKQASLPTPSLNNQAVLFDDDVTDLQPNPVKGICPDVQAIQKGFDLPR 560
>At1g75200.1 68414.m08736 flavodoxin family protein / radical SAM
domain-containing protein contains Pfam profiles
PF00258: Flavodoxin, PF04055: radical SAM domain protein
Length = 647
Score = 25.4 bits (53), Expect = 5.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 145 YCWRFSTRPIGIFW 104
+CWR T P+G W
Sbjct: 338 FCWRHHTNPVGKSW 351
>At1g50430.1 68414.m05652 7-dehydrocholesterol reductase / 7-DHC
reductase / sterol delta-7-reductase (ST7R) / dwarf5
protein (DWF5) identical to SP|Q9LDU6
7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC
reductase) (Sterol delta-7-reductase) (Dwarf5 protein)
{Arabidopsis thaliana}
Length = 432
Score = 25.4 bits (53), Expect = 5.7
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Frame = -2
Query: 109 FWGTSQCAH----FTLFHGCYSYVPSLYYS 32
+W T AH F + GC +VPS+Y S
Sbjct: 248 YWNTMDIAHDRAGFYICWGCLVWVPSVYTS 277
>At1g45160.1 68414.m05177 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 1067
Score = 25.0 bits (52), Expect = 7.5
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 13 IRIGERN--CNKGMGHRSSNHEKG 78
I+I E N C+K MG +S +HE G
Sbjct: 119 IKISETNPPCSKSMGIKSFSHELG 142
>At2g45240.1 68415.m05632 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to SP|Q01662 Methionine aminopeptidase
1 precursor (EC 3.4.11.18) {Saccharomyces cerevisiae};
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 398
Score = 24.6 bits (51), Expect = 9.9
Identities = 16/76 (21%), Positives = 32/76 (42%)
Frame = +2
Query: 29 ETVIKGWDIGVATMKKGEVCTLTCAPEYAYXXXXXXXXXXXXSTLKFEIELIDWKVEDLS 208
+ + +GW + +KKG+ T P + + + EIE DW ++
Sbjct: 72 DLISQGW---LYCVKKGQARTPKL-PHFDWTGPLKQYPISTKRVVPAEIEKPDWAIDGTP 127
Query: 209 PNKNKGILRHIIEMGT 256
+ L+H++E+ T
Sbjct: 128 KVEPNSDLQHVVEIKT 143
>At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc finger
(ZZ type) family protein contains Pfam profiles PF02135:
TAZ zinc finger, PF00569: Zinc finger, ZZ type
Length = 1706
Score = 24.6 bits (51), Expect = 9.9
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 106 WGTSQCAHFTLFHGCY 59
W SQC F L GCY
Sbjct: 1426 WVCSQCKDFQLCDGCY 1441
>At1g16140.1 68414.m01934 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 690
Score = 24.6 bits (51), Expect = 9.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 16 RIGERNCNKGMGHRSSNHEKG*SVHIDLC 102
R+ R+C G G+R + + +G + ID C
Sbjct: 266 RMSYRSCYCGSGYRGNPYIRGGCIDIDEC 294
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,757,284
Number of Sequences: 28952
Number of extensions: 94787
Number of successful extensions: 235
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 12,070,560
effective HSP length: 69
effective length of database: 10,072,872
effective search space used: 231676056
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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