Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B11
(322 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8C671 Cluster: 0 day neonate head cDNA, RIKEN full-len... 102 1e-21
UniRef50_Q6NXQ0 Cluster: SFRS2 protein; n=4; Homo/Pan/Gorilla gr... 102 1e-21
UniRef50_Q06477 Cluster: IFN-response element binding factor 2; ... 100 1e-20
UniRef50_Q9BRL6 Cluster: Splicing factor, arginine/serine-rich 2... 88 4e-17
UniRef50_Q09511 Cluster: Probable splicing factor, arginine/seri... 80 8e-15
UniRef50_UPI00005C16F5 Cluster: PREDICTED: similar to Sfrs2-prov... 71 4e-12
UniRef50_Q018R2 Cluster: RSP4_CAEEL Probable splicing factor, ar... 61 5e-09
UniRef50_A4RXT9 Cluster: Predicted protein; n=1; Ostreococcus lu... 57 9e-08
UniRef50_A7QII5 Cluster: Chromosome chr12 scaffold_103, whole ge... 54 5e-07
UniRef50_A2APT2 Cluster: Novel protein; n=3; Murinae|Rep: Novel ... 53 1e-06
UniRef50_UPI0000DBF0C6 Cluster: UPI0000DBF0C6 related cluster; n... 52 2e-06
UniRef50_Q9FMG4 Cluster: Similarity to splicing factor; n=6; Mag... 52 2e-06
UniRef50_Q8II95 Cluster: Putative uncharacterized protein; n=1; ... 51 6e-06
UniRef50_A7ARN5 Cluster: Ser/Arg-rich splicing factor, putative;... 50 1e-05
UniRef50_Q7RMQ4 Cluster: Dentin phosphoryn; n=5; Plasmodium (Vin... 49 2e-05
UniRef50_A5K4S8 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-05
UniRef50_Q8WXF0 Cluster: 35 kDa SR repressor protein; n=18; Eute... 46 1e-04
UniRef50_UPI0000D55448 Cluster: PREDICTED: similar to Splicing f... 46 2e-04
UniRef50_Q9SEU4 Cluster: Serine/arginine-rich protein; n=22; Euk... 44 9e-04
UniRef50_Q5CF61 Cluster: Dentin phosphoryn; n=2; Cryptosporidium... 43 0.001
UniRef50_Q9FYA9 Cluster: SC35-like splicing factor SCL30, 30 kD;... 43 0.002
UniRef50_O75494 Cluster: FUS-interacting serine-arginine-rich pr... 43 0.002
UniRef50_Q2QNB0 Cluster: RNA recognition motif family protein, e... 41 0.005
UniRef50_A7P058 Cluster: Chromosome chr6 scaffold_3, whole genom... 41 0.005
UniRef50_Q8MYR4 Cluster: SD14970p; n=2; Drosophila melanogaster|... 41 0.005
UniRef50_Q1PDV2 Cluster: 28 kDa SC35-like splicing factor; n=9; ... 41 0.006
UniRef50_UPI0000DB7622 Cluster: PREDICTED: similar to CG3335-PA;... 40 0.008
UniRef50_A5KAW4 Cluster: Ser/Arg-rich splicing factor, putative;... 40 0.011
UniRef50_Q9P4V6 Cluster: RNA-binding protein; n=3; Saccharomycet... 40 0.011
UniRef50_UPI000155BFA0 Cluster: PREDICTED: similar to FUSIP1 pro... 40 0.014
UniRef50_UPI0000498562 Cluster: RNA-binding protein; n=1; Entamo... 39 0.019
UniRef50_Q1PES4 Cluster: RNA recognition motif-containing protei... 39 0.025
UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of str... 39 0.025
UniRef50_Q8DIY8 Cluster: RNA binding protein; n=3; Cyanobacteria... 38 0.033
UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1; Nitros... 38 0.033
UniRef50_Q8IIT2 Cluster: Nucleic acid binding factor, putative; ... 38 0.033
UniRef50_A1DGG0 Cluster: Small subunit of nuclear cap-binding pr... 38 0.033
UniRef50_Q54PB2 Cluster: RNA-binding region-containing protein; ... 38 0.043
UniRef50_UPI0000D997C2 Cluster: PREDICTED: similar to FUS intera... 38 0.057
UniRef50_Q23QD3 Cluster: Polyadenylate-binding protein 2; n=1; T... 38 0.057
UniRef50_Q4U9S0 Cluster: RNA-binding protein, putative; n=2; The... 37 0.075
UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1; Op... 37 0.100
UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.13
UniRef50_Q8WXF1 Cluster: Paraspeckle component 1; n=27; Euteleos... 36 0.13
UniRef50_A2YR27 Cluster: Putative uncharacterized protein; n=3; ... 36 0.17
UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10... 36 0.17
UniRef50_A4RWB3 Cluster: Predicted protein; n=2; Ostreococcus|Re... 36 0.23
UniRef50_Q4MZK1 Cluster: Nucleic acid binding factor, putative; ... 36 0.23
UniRef50_A5JZY0 Cluster: RNA binding protein, putative; n=2; Euk... 36 0.23
UniRef50_Q2GTP8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.23
UniRef50_UPI00015B5DA3 Cluster: PREDICTED: similar to CG3335-PA;... 35 0.30
UniRef50_Q75EU7 Cluster: AAL018Wp; n=2; Eremothecium gossypii|Re... 35 0.30
UniRef50_A3LV94 Cluster: U4/U6 snRNA-associated splicing factor;... 35 0.30
UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:... 35 0.40
UniRef50_Q6AWW6 Cluster: At2g47310; n=2; Arabidopsis thaliana|Re... 35 0.40
UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus lu... 35 0.40
UniRef50_Q7R874 Cluster: RNA recognition motif, putative; n=6; P... 35 0.40
UniRef50_Q4UI71 Cluster: RNA-binding (SR) protein, putative; n=2... 35 0.40
UniRef50_A7AT82 Cluster: RNA recognition motif containing protei... 35 0.40
UniRef50_A0DWV5 Cluster: Chromosome undetermined scaffold_67, wh... 35 0.40
UniRef50_Q9P383 Cluster: Nuclear cap-binding complex small subun... 35 0.40
UniRef50_A5DDT0 Cluster: Putative uncharacterized protein; n=1; ... 35 0.40
UniRef50_UPI000023E598 Cluster: hypothetical protein FG10156.1; ... 34 0.53
UniRef50_Q5TTQ2 Cluster: ENSANGP00000026814; n=3; Endopterygota|... 34 0.53
UniRef50_A7AN88 Cluster: RNA recognition motif domain containing... 34 0.53
UniRef50_UPI0000546443 Cluster: PREDICTED: hypothetical protein;... 34 0.70
UniRef50_P73557 Cluster: RNA-binding protein; n=2; Chroococcales... 34 0.70
UniRef50_Q9FIU6 Cluster: Similarity to RNA-binding protein; n=4;... 34 0.70
UniRef50_Q94AC3 Cluster: AT4g36960/C7A10_400; n=11; Magnoliophyt... 34 0.70
UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP... 34 0.70
UniRef50_O23189 Cluster: RNA-binding like protein; n=1; Arabidop... 34 0.70
UniRef50_A7PHW6 Cluster: Chromosome chr13 scaffold_17, whole gen... 34 0.70
UniRef50_A7RLV0 Cluster: Predicted protein; n=1; Nematostella ve... 34 0.70
UniRef50_O14327 Cluster: Polyadenylate-binding protein 2 (Poly(A... 34 0.70
UniRef50_UPI0000E47947 Cluster: PREDICTED: similar to GA10247-PA... 33 0.93
UniRef50_Q39SC4 Cluster: RNA-binding region RNP-1; n=2; Geobacte... 33 0.93
UniRef50_A4RUB8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 33 0.93
UniRef50_Q17DU7 Cluster: RNA binding motif protein; n=3; Culicid... 33 0.93
UniRef50_A7RXA3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 33 0.93
UniRef50_Q4PBU3 Cluster: Putative uncharacterized protein; n=1; ... 33 0.93
UniRef50_UPI000051A8B9 Cluster: PREDICTED: similar to CG1316-PA;... 33 1.2
UniRef50_Q74DJ2 Cluster: RNA-binding protein; n=2; Geobacter|Rep... 33 1.2
UniRef50_Q9ZVW9 Cluster: Putative splicing factor; n=3; Arabidop... 33 1.2
UniRef50_Q9LU62 Cluster: Similarity to poly(A)-binding protein I... 33 1.2
UniRef50_Q9CAE4 Cluster: Putative uncharacterized protein F13M14... 33 1.2
UniRef50_Q8I5N6 Cluster: Putative uncharacterized protein; n=1; ... 33 1.2
UniRef50_Q4QHE5 Cluster: Putative uncharacterized protein; n=3; ... 33 1.2
UniRef50_Q4H2Q6 Cluster: Ci-Tardbp protein; n=1; Ciona intestina... 33 1.2
UniRef50_Q5KLP3 Cluster: Poly(A) binding protein, putative; n=1;... 33 1.2
UniRef50_Q2H622 Cluster: Putative uncharacterized protein; n=1; ... 33 1.2
UniRef50_A1CJX8 Cluster: Glycine-rich RNA-binding protein, putat... 33 1.2
UniRef50_Q9VZE4 Cluster: CG1316-PA; n=5; Diptera|Rep: CG1316-PA ... 33 1.6
UniRef50_Q5CX28 Cluster: RRM domain containing protein; T22E16.1... 33 1.6
UniRef50_O44530 Cluster: Putative uncharacterized protein; n=1; ... 33 1.6
UniRef50_A5K494 Cluster: Nucleic acid binding factor, putative; ... 33 1.6
UniRef50_A2EJG8 Cluster: Putative uncharacterized protein; n=1; ... 33 1.6
UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1; ... 33 1.6
UniRef50_P48810 Cluster: Heterogeneous nuclear ribonucleoprotein... 33 1.6
UniRef50_A0WC53 Cluster: RNA-binding region RNP-1; n=2; Desulfur... 32 2.1
UniRef50_A7QT53 Cluster: Chromosome undetermined scaffold_165, w... 32 2.1
UniRef50_Q5CWM4 Cluster: U2 snRNP. Hsh49p, RRM domain containing... 32 2.1
UniRef50_Q5CWK5 Cluster: 5x RRM. Mrd1p like, splicing related; n... 32 2.1
UniRef50_Q5CRV5 Cluster: SPAC25G10.01-like RRM domain containing... 32 2.1
UniRef50_Q4UFE0 Cluster: Nucleolar, RNA-binding protein, putativ... 32 2.1
UniRef50_UPI00015B633B Cluster: PREDICTED: similar to conserved ... 32 2.8
UniRef50_UPI00015B6013 Cluster: PREDICTED: similar to GA12086-PA... 32 2.8
UniRef50_UPI0001560A8A Cluster: PREDICTED: hypothetical protein;... 32 2.8
UniRef50_UPI0000DB6CD5 Cluster: PREDICTED: similar to no on or o... 32 2.8
UniRef50_UPI000058483A Cluster: PREDICTED: hypothetical protein;... 32 2.8
UniRef50_Q569S7 Cluster: LOC443584 protein; n=5; Xenopus|Rep: LO... 32 2.8
UniRef50_Q02AB7 Cluster: RNP-1 like RNA-binding protein; n=2; ce... 32 2.8
UniRef50_Q016G8 Cluster: Initiation factor 3g; n=2; Ostreococcus... 32 2.8
UniRef50_Q6UDW5 Cluster: Erythrocyte membrane protein 1; n=5; Pl... 32 2.8
UniRef50_Q57W18 Cluster: RNA-binding protein, putative; n=1; Try... 32 2.8
UniRef50_Q1HE01 Cluster: Cbp20; n=6; Eukaryota|Rep: Cbp20 - Bomb... 32 2.8
UniRef50_Q17GF4 Cluster: Putative uncharacterized protein; n=1; ... 32 2.8
UniRef50_Q5VVE2 Cluster: SMART/HDAC1 associated repressor protei... 32 2.8
UniRef50_Q9C222 Cluster: Putative uncharacterized protein B8L3.0... 32 2.8
UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;... 32 2.8
UniRef50_Q96T58 Cluster: Msx2-interacting protein; n=14; Eutheri... 32 2.8
UniRef50_Q7ZWE3 Cluster: La-related protein 7; n=3; Clupeocephal... 32 2.8
UniRef50_P38922 Cluster: Protein HRB1; n=6; Saccharomycetales|Re... 32 2.8
UniRef50_Q4S8N9 Cluster: Chromosome 7 SCAF14703, whole genome sh... 31 3.7
UniRef50_Q8CD63 Cluster: 13 days embryo male testis cDNA, RIKEN ... 31 3.7
UniRef50_Q32LZ4 Cluster: Msi2h protein; n=4; Eutheria|Rep: Msi2h... 31 3.7
UniRef50_A7RXI1 Cluster: Predicted protein; n=1; Nematostella ve... 31 3.7
UniRef50_A7AW01 Cluster: RNA recognition motif domain containing... 31 3.7
UniRef50_A2EQG8 Cluster: Putative uncharacterized protein; n=1; ... 31 3.7
UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, wh... 31 3.7
UniRef50_Q96V40 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 31 3.7
UniRef50_Q7S1F3 Cluster: Predicted protein; n=4; Pezizomycotina|... 31 3.7
UniRef50_Q6FS32 Cluster: Similar to sp|P38922 Saccharomyces cere... 31 3.7
UniRef50_Q5K911 Cluster: Telomere maintenance protein, putative;... 31 3.7
UniRef50_Q09301 Cluster: Putative RNA-binding protein EEED8.12; ... 31 3.7
UniRef50_Q57014 Cluster: Putative RNA-binding protein rbpA; n=70... 31 3.7
UniRef50_Q4SJ02 Cluster: Chromosome 21 SCAF14577, whole genome s... 31 4.9
UniRef50_A5Z3T7 Cluster: Putative uncharacterized protein; n=1; ... 31 4.9
UniRef50_Q9SJT4 Cluster: Expressed protein; n=1; Arabidopsis tha... 31 4.9
UniRef50_A3AAN7 Cluster: Putative uncharacterized protein; n=2; ... 31 4.9
UniRef50_Q8I2R8 Cluster: RNA-binding protein, putative; n=5; Pla... 31 4.9
UniRef50_Q5BXS3 Cluster: SJCHGC01369 protein; n=2; Schistosoma j... 31 4.9
UniRef50_Q57YP5 Cluster: RNA-binding protein, putative; n=1; Try... 31 4.9
UniRef50_Q4N8H4 Cluster: RNA-binding protein, putative; n=2; The... 31 4.9
UniRef50_Q23RL2 Cluster: Nucleolar phosphoprotein, putative; n=2... 31 4.9
UniRef50_A7RU25 Cluster: Predicted protein; n=1; Nematostella ve... 31 4.9
UniRef50_Q8IY53 Cluster: Putative uncharacterized protein; n=1; ... 31 4.9
UniRef50_Q4PFW3 Cluster: Putative uncharacterized protein; n=1; ... 31 4.9
UniRef50_Q2UQ21 Cluster: Predicted protein; n=3; Pezizomycotina|... 31 4.9
UniRef50_A1C7B3 Cluster: Putative uncharacterized protein; n=1; ... 31 4.9
UniRef50_Q8IUH3 Cluster: RNA-binding protein 45; n=27; Euteleost... 31 4.9
UniRef50_P25555 Cluster: Single-strand telomeric DNA-binding pro... 31 4.9
UniRef50_P41891 Cluster: Protein gar2; n=12; Ascomycota|Rep: Pro... 31 4.9
UniRef50_Q3WCP4 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_Q2AH97 Cluster: Permease YjgP/YjgQ; n=1; Halothermothri... 31 6.5
UniRef50_Q6NPL0 Cluster: At4g09040; n=6; Arabidopsis thaliana|Re... 31 6.5
UniRef50_Q0IMD4 Cluster: Os12g0577000 protein; n=8; Oryza sativa... 31 6.5
UniRef50_A5BUJ6 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_Q8ILQ0 Cluster: Spliceosome-associated protein, putativ... 31 6.5
UniRef50_Q54CU3 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 31 6.5
UniRef50_Q54CU2 Cluster: RNA-binding region-containing protein; ... 31 6.5
UniRef50_A7AWX8 Cluster: RNA recognition motif. (A.k.a. RRM, RBD... 31 6.5
UniRef50_A7AWX7 Cluster: RNA recognition motif. (A.k.a. RRM, RBD... 31 6.5
UniRef50_A0BHN3 Cluster: Chromosome undetermined scaffold_108, w... 31 6.5
UniRef50_Q6MVP3 Cluster: Related to heterogeneous nuclear ribonu... 31 6.5
UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n... 31 6.5
UniRef50_A6RY04 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_A5DS71 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_Q9BX46 Cluster: RNA-binding protein 24; n=52; Eumetazoa... 31 6.5
UniRef50_Q10572 Cluster: Sex determination protein fox-1; n=2; C... 31 6.5
UniRef50_UPI0000E47201 Cluster: PREDICTED: similar to developmen... 30 8.6
UniRef50_UPI0000E45F83 Cluster: PREDICTED: similar to neurotryps... 30 8.6
UniRef50_UPI0000E45F82 Cluster: PREDICTED: hypothetical protein;... 30 8.6
UniRef50_Q11SF1 Cluster: RNA binding protein; n=6; Bacteria|Rep:... 30 8.6
UniRef50_Q0YR84 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
UniRef50_A1SJJ7 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:... 30 8.6
UniRef50_Q1PEP5 Cluster: Nucleolin; n=2; Arabidopsis thaliana|Re... 30 8.6
UniRef50_Q9W108 Cluster: CG3594-PA; n=3; Sophophora|Rep: CG3594-... 30 8.6
UniRef50_Q93233 Cluster: Putative uncharacterized protein pabp-2... 30 8.6
UniRef50_Q5DH48 Cluster: SJCHGC06087 protein; n=1; Schistosoma j... 30 8.6
UniRef50_Q57WC9 Cluster: RNA-binding protein, putative; n=2; Try... 30 8.6
UniRef50_A6NDY0 Cluster: Uncharacterized protein ENSP00000367609... 30 8.6
UniRef50_Q8SSA1 Cluster: NUCLEOLAR PROTEIN OF THE GAR FAMILY; n=... 30 8.6
UniRef50_Q5A9A2 Cluster: Putative uncharacterized protein PRP24;... 30 8.6
UniRef50_Q2TW86 Cluster: Predicted protein; n=2; Aspergillus|Rep... 30 8.6
UniRef50_O13845 Cluster: RNA-binding protein rsd1; n=1; Schizosa... 30 8.6
>UniRef50_Q8C671 Cluster: 0 day neonate head cDNA, RIKEN full-length
enriched library, clone:4833401I21 product:splicing
factor, arginine/serine-rich 2 (SC- 35), full insert
sequence; n=7; Mammalia|Rep: 0 day neonate head cDNA,
RIKEN full-length enriched library, clone:4833401I21
product:splicing factor, arginine/serine-rich 2 (SC-
35), full insert sequence - Mus musculus (Mouse)
Length = 254
Score = 102 bits (245), Expect = 1e-21
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ES
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 276 XXXXXXXXEEALDSL 320
E+A+D++
Sbjct: 61 RFHDKRDAEDAMDAM 75
>UniRef50_Q6NXQ0 Cluster: SFRS2 protein; n=4; Homo/Pan/Gorilla
group|Rep: SFRS2 protein - Homo sapiens (Human)
Length = 179
Score = 102 bits (245), Expect = 1e-21
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ES
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 276 XXXXXXXXEEALDSL 320
E+A+D++
Sbjct: 61 RFHDKRDAEDAMDAM 75
>UniRef50_Q06477 Cluster: IFN-response element binding factor 2;
n=3; Murinae|Rep: IFN-response element binding factor 2
- Mus musculus (Mouse)
Length = 277
Score = 99.5 bits (237), Expect = 1e-20
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ES
Sbjct: 47 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKES 100
>UniRef50_Q9BRL6 Cluster: Splicing factor, arginine/serine-rich 2B;
n=41; Eumetazoa|Rep: Splicing factor,
arginine/serine-rich 2B - Homo sapiens (Human)
Length = 282
Score = 87.8 bits (208), Expect = 4e-17
Identities = 36/52 (69%), Positives = 46/52 (88%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
MS GRPPP +DGM++LKVDNLTYRT+P+ LRRVFE+ G VGD+YIPR+ +T+
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTK 52
>UniRef50_Q09511 Cluster: Probable splicing factor,
arginine/serine-rich 4; n=10; Bilateria|Rep: Probable
splicing factor, arginine/serine-rich 4 - Caenorhabditis
elegans
Length = 196
Score = 80.2 bits (189), Expect = 8e-15
Identities = 35/69 (50%), Positives = 47/69 (68%)
Frame = +3
Query: 108 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXX 287
R P I+G+ SLK+DNL+Y+TTP DLRR FER G++GD++IPRD+Y+R+S
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 288 XXXXEEALD 314
E ALD
Sbjct: 70 RRDAEHALD 78
>UniRef50_UPI00005C16F5 Cluster: PREDICTED: similar to Sfrs2-prov
protein; n=4; Bos taurus|Rep: PREDICTED: similar to
Sfrs2-prov protein - Bos taurus
Length = 194
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/75 (44%), Positives = 46/75 (61%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXX 275
M+Y RPPP + ++SLKVDNLT + LR +FE+ G + D+YI RDR+T+ES
Sbjct: 1 MNYSRPPPNVGDLISLKVDNLTDPISHSTLRCIFEKYGPISDVYILRDRFTQESRDFAFI 60
Query: 276 XXXXXXXXEEALDSL 320
EEA+D+L
Sbjct: 61 CFHDKHHAEEAMDAL 75
>UniRef50_Q018R2 Cluster: RSP4_CAEEL Probable splicing factor,
arginine/serine-rich 4; n=1; Ostreococcus tauri|Rep:
RSP4_CAEEL Probable splicing factor,
arginine/serine-rich 4 - Ostreococcus tauri
Length = 100
Score = 60.9 bits (141), Expect = 5e-09
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +3
Query: 108 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
R P ++ +VS+K+DNL+Y EDLR F R GE+GD+Y+P DR TR
Sbjct: 43 RERPDVNDLVSVKIDNLSYDAREEDLREAFSRYGEIGDVYVPLDRETR 90
>UniRef50_A4RXT9 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 98
Score = 56.8 bits (131), Expect = 9e-08
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +3
Query: 117 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 242
P I +VS+K+DN++Y EDLR FE+ G+VGD+YIP++R
Sbjct: 1 PDISNLVSVKIDNVSYELREEDLREAFEKFGDVGDVYIPKER 42
>UniRef50_A7QII5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=11; Magnoliophyta|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 284
Score = 54.4 bits (125), Expect = 5e-07
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +3
Query: 102 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXX 278
+GR PP I SL V N+T+RTT +DL F++ G+V DI+IPRDR T ES
Sbjct: 4 FGRSGPPDIKDTFSLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGESRGFAFVR 63
Query: 279 XXXXXXXEEALDSL 320
++A+D L
Sbjct: 64 YKYADEAQKAVDRL 77
>UniRef50_A2APT2 Cluster: Novel protein; n=3; Murinae|Rep: Novel
protein - Mus musculus (Mouse)
Length = 829
Score = 52.8 bits (121), Expect = 1e-06
Identities = 26/66 (39%), Positives = 35/66 (53%)
Frame = +3
Query: 123 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXE 302
+DGM LKV+NL + T+ L+ VFE G +GD+YIPR+ T E
Sbjct: 10 VDGMTCLKVENLAHHTSSYTLKHVFEDYGPLGDVYIPRNHLTEEHYGFAFIHFYNKCDAN 69
Query: 303 EALDSL 320
+AL SL
Sbjct: 70 DALHSL 75
>UniRef50_UPI0000DBF0C6 Cluster: UPI0000DBF0C6 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF0C6 UniRef100 entry -
Rattus norvegicus
Length = 197
Score = 52.4 bits (120), Expect = 2e-06
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +3
Query: 123 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
+DGM LKV+NL Y T+ L+ +FE G VGD+++PR+ T E+
Sbjct: 10 VDGMTCLKVENLAYHTSSYTLKLIFEDYGAVGDVFVPRNHLTEEN 54
>UniRef50_Q9FMG4 Cluster: Similarity to splicing factor; n=6;
Magnoliophyta|Rep: Similarity to splicing factor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 303
Score = 52.0 bits (119), Expect = 2e-06
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +3
Query: 102 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
+GR PP I SL V N+T+RTT +DL +F + G+V D++IPRDR T +S
Sbjct: 4 FGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDS 56
>UniRef50_Q8II95 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 914
Score = 50.8 bits (116), Expect = 6e-06
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +3
Query: 123 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
+D S+ + NL Y T+P+ +R++FE G+V D+Y+P D YTR+
Sbjct: 2 VDSGCSILIRNLNYDTSPDKVRKIFENVGKVKDVYLPLDHYTRK 45
>UniRef50_A7ARN5 Cluster: Ser/Arg-rich splicing factor, putative;
n=1; Babesia bovis|Rep: Ser/Arg-rich splicing factor,
putative - Babesia bovis
Length = 188
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
SL V NL Y T+P+ LR F R GE+ D+Y+P D YTR+
Sbjct: 13 SLLVRNLKYETSPDQLRAAFSRFGEIRDVYLPLDYYTRK 51
>UniRef50_Q7RMQ4 Cluster: Dentin phosphoryn; n=5; Plasmodium
(Vinckeia)|Rep: Dentin phosphoryn - Plasmodium yoelii
yoelii
Length = 793
Score = 49.2 bits (112), Expect = 2e-05
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +3
Query: 123 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXE 302
++ SL + NL++ T+P+ +R++FE G++ D+Y+P D YTR +
Sbjct: 2 VENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAK 61
Query: 303 EALDSL 320
EAL+ L
Sbjct: 62 EALNIL 67
>UniRef50_A5K4S8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1057
Score = 48.4 bits (110), Expect = 3e-05
Identities = 17/43 (39%), Positives = 30/43 (69%)
Frame = +3
Query: 123 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
++ SL + NL++ T+PE +R++F+ G + D+Y+P D YTR
Sbjct: 2 VENGCSLLIKNLSFHTSPEKIRKIFQSFGRIRDVYLPLDHYTR 44
>UniRef50_Q8WXF0 Cluster: 35 kDa SR repressor protein; n=18;
Euteleostomi|Rep: 35 kDa SR repressor protein - Homo
sapiens (Human)
Length = 261
Score = 46.4 bits (105), Expect = 1e-04
Identities = 29/73 (39%), Positives = 35/73 (47%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL + N+ T PEDLRR F R G + D+YIP D YTR
Sbjct: 4 YTRPPN-----TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSL 320
E+AL +L
Sbjct: 59 EDVRDAEDALYNL 71
>UniRef50_UPI0000D55448 Cluster: PREDICTED: similar to Splicing
factor, arginine/serine-rich 2 (Splicing factor SC35)
(SC-35) (Splicing component, 35 kDa); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Splicing factor,
arginine/serine-rich 2 (Splicing factor SC35) (SC-35)
(Splicing component, 35 kDa) - Tribolium castaneum
Length = 231
Score = 45.6 bits (103), Expect = 2e-04
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
++K+ NL Y+ EDL+++F G + DIY+PR RYT
Sbjct: 132 TVKITNLNYKIDEEDLKKIFSGIGPIADIYVPRLRYT 168
>UniRef50_Q9SEU4 Cluster: Serine/arginine-rich protein; n=22;
Eukaryota|Rep: Serine/arginine-rich protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 287
Score = 43.6 bits (98), Expect = 9e-04
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
SL V NL + EDLR+ FE+ G V DIY+PRD YT
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYT 73
>UniRef50_Q5CF61 Cluster: Dentin phosphoryn; n=2;
Cryptosporidium|Rep: Dentin phosphoryn - Cryptosporidium
hominis
Length = 286
Score = 43.2 bits (97), Expect = 0.001
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
SL V NL + T+P +R FER G V D+Y+P D YTR
Sbjct: 91 SLLVRNLRFETSPGRVRHHFERYGPVRDVYLPLDYYTR 128
>UniRef50_Q9FYA9 Cluster: SC35-like splicing factor SCL30, 30 kD;
n=10; Magnoliophyta|Rep: SC35-like splicing factor
SCL30, 30 kD - Arabidopsis thaliana (Mouse-ear cress)
Length = 262
Score = 42.7 bits (96), Expect = 0.002
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
SL V N+ PE+LR FER G V D+YIPRD Y+
Sbjct: 48 SLLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYS 84
>UniRef50_O75494 Cluster: FUS-interacting serine-arginine-rich
protein 1; n=55; Tetrapoda|Rep: FUS-interacting
serine-arginine-rich protein 1 - Homo sapiens (Human)
Length = 262
Score = 42.7 bits (96), Expect = 0.002
Identities = 28/73 (38%), Positives = 34/73 (46%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXX 281
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 282 XXXXXXEEALDSL 320
E+AL +L
Sbjct: 59 EDVRDAEDALHNL 71
>UniRef50_Q2QNB0 Cluster: RNA recognition motif family protein,
expressed; n=3; Magnoliophyta|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 263
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Frame = +3
Query: 105 GRPPPRI-------DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
GR PPR G SL V N+ EDLR FER G V D+Y+P+D Y+ E
Sbjct: 20 GRSPPRRGYGGRREQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGE 76
>UniRef50_A7P058 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 272
Score = 41.1 bits (92), Expect = 0.005
Identities = 23/49 (46%), Positives = 27/49 (55%)
Frame = +3
Query: 102 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
YG D SL V NL + EDLRR F + G + DIY+PRD YT
Sbjct: 27 YGGRGSARDLPTSLLVRNLRHDCRGEDLRRPFGQFGPLKDIYLPRDYYT 75
>UniRef50_Q8MYR4 Cluster: SD14970p; n=2; Drosophila
melanogaster|Rep: SD14970p - Drosophila melanogaster
(Fruit fly)
Length = 918
Score = 41.1 bits (92), Expect = 0.005
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 153 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
NL Y TT EDLR++FE+ G V ++ +P D+ TR+
Sbjct: 370 NLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRK 403
>UniRef50_Q1PDV2 Cluster: 28 kDa SC35-like splicing factor; n=9;
Magnoliophyta|Rep: 28 kDa SC35-like splicing factor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 236
Score = 40.7 bits (91), Expect = 0.006
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +3
Query: 129 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
G L + NL P DLR FER G + DIY+PR+ YT E
Sbjct: 45 GPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGE 86
>UniRef50_UPI0000DB7622 Cluster: PREDICTED: similar to CG3335-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG3335-PA
- Apis mellifera
Length = 816
Score = 40.3 bits (90), Expect = 0.008
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
+ NL+Y TT +D+R++FE+ G + ++ +P DR TR+
Sbjct: 306 IRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRK 341
>UniRef50_A5KAW4 Cluster: Ser/Arg-rich splicing factor, putative;
n=6; Plasmodium|Rep: Ser/Arg-rich splicing factor,
putative - Plasmodium vivax
Length = 328
Score = 39.9 bits (89), Expect = 0.011
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 135 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD 314
+SL + L Y T+P +R F++ G + D+Y+P D YT+E E+AL
Sbjct: 12 MSLLIRKLKYDTSPSMVREKFKKYGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALK 71
Query: 315 SL 320
+
Sbjct: 72 EM 73
>UniRef50_Q9P4V6 Cluster: RNA-binding protein; n=3;
Saccharomycetales|Rep: RNA-binding protein - Candida
boidinii (Yeast)
Length = 255
Score = 39.9 bits (89), Expect = 0.011
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
S+ + NL Y TP++L++ FE CG + I IP +++T
Sbjct: 125 SVYIGNLDYAATPDELQKHFESCGSINRITIPTNKFT 161
>UniRef50_UPI000155BFA0 Cluster: PREDICTED: similar to FUSIP1
protein, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to FUSIP1 protein, partial -
Ornithorhynchus anatinus
Length = 224
Score = 39.5 bits (88), Expect = 0.014
Identities = 26/72 (36%), Positives = 32/72 (44%)
Frame = +3
Query: 105 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXX 284
G P P ID SL+ EDLRR F R G + D+Y+P D YTR
Sbjct: 82 GDPGP-IDDAGSLRCVPAFVLERSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 140
Query: 285 XXXXXEEALDSL 320
E+AL +L
Sbjct: 141 DVRDAEDALHNL 152
>UniRef50_UPI0000498562 Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 135
Score = 39.1 bits (87), Expect = 0.019
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
S+ V N+ Y TT E+L +FERCG V + IP +++T+
Sbjct: 40 SVHVSNVEYTTTKEELEDLFERCGVVLKVNIPINQFTQ 77
>UniRef50_Q1PES4 Cluster: RNA recognition motif-containing protein;
n=2; Arabidopsis thaliana|Rep: RNA recognition
motif-containing protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 317
Score = 38.7 bits (86), Expect = 0.025
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
V NLT+RTT +DLRR FE+ G+V D + + Y S
Sbjct: 16 VGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRS 52
>UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 294
Score = 38.7 bits (86), Expect = 0.025
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
D ++L+V NL+ T +DLRR+F + G + +Y+ +DR T
Sbjct: 211 DDELTLRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDRDT 251
>UniRef50_Q8DIY8 Cluster: RNA binding protein; n=3;
Cyanobacteria|Rep: RNA binding protein - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 90
Score = 38.3 bits (85), Expect = 0.033
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 135 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
++L + NL+Y T DLR VFE+ G + I +P DR T
Sbjct: 1 MTLYIGNLSYEATENDLREVFEKYGAIRRIVLPVDRET 38
>UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1;
Nitrosococcus oceani ATCC 19707|Rep: RNA-binding
protein, RNP-1 - Nitrosococcus oceani (strain ATCC 19707
/ NCIMB 11848)
Length = 119
Score = 38.3 bits (85), Expect = 0.033
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 132 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
+V++ V NL+Y+ T EDLR FE GEV + D+++ S
Sbjct: 17 IVNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRS 58
>UniRef50_Q8IIT2 Cluster: Nucleic acid binding factor, putative;
n=1; Plasmodium falciparum 3D7|Rep: Nucleic acid binding
factor, putative - Plasmodium falciparum (isolate 3D7)
Length = 580
Score = 38.3 bits (85), Expect = 0.033
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
L V L TT E LR FE+ GE+ DIY+P D YT
Sbjct: 504 LFVTKLNSATTIEKLRNYFEKFGEIIDIYMPNDVYT 539
>UniRef50_A1DGG0 Cluster: Small subunit of nuclear cap-binding
protein complex; n=8; Pezizomycotina|Rep: Small subunit
of nuclear cap-binding protein complex - Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 196
Score = 38.3 bits (85), Expect = 0.033
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
P ++ +L V NL++ TT E + +F +CGE+ + + DRY +
Sbjct: 59 PVDKLKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRYNK 105
>UniRef50_Q54PB2 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 895
Score = 37.9 bits (84), Expect = 0.043
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
V NL+Y T EDL +VF + G++ +I+IP D +++S
Sbjct: 365 VRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKS 401
>UniRef50_UPI0000D997C2 Cluster: PREDICTED: similar to FUS
interacting protein (serine-arginine rich) 1; n=1;
Macaca mulatta|Rep: PREDICTED: similar to FUS
interacting protein (serine-arginine rich) 1 - Macaca
mulatta
Length = 465
Score = 37.5 bits (83), Expect = 0.057
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 177 EDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
EDLRR F R G + D+Y+P D YTR E+AL +L
Sbjct: 392 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNL 439
>UniRef50_Q23QD3 Cluster: Polyadenylate-binding protein 2; n=1;
Tetrahymena thermophila SB210|Rep: Polyadenylate-binding
protein 2 - Tetrahymena thermophila SB210
Length = 180
Score = 37.5 bits (83), Expect = 0.057
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 242
S+ V N+ Y TT E+L +F+ CGE+ I IP+ R
Sbjct: 60 SIFVQNVEYNTTKEELMDIFKDCGEIEKITIPQTR 94
>UniRef50_Q4U9S0 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
annulata
Length = 245
Score = 37.1 bits (82), Expect = 0.075
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 153 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
NL + T+P+ +R FE+ G++ D+Y+P D TR
Sbjct: 13 NLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTR 45
>UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1;
Opitutaceae bacterium TAV2|Rep: RNP-1 like RNA-binding
protein - Opitutaceae bacterium TAV2
Length = 106
Score = 36.7 bits (81), Expect = 0.100
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
L V NL++ T+ DLR F CG + D+++ DR T
Sbjct: 5 LYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRET 40
>UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 308
Score = 36.3 bits (80), Expect = 0.13
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
D + +L+V NL+ +DLR +F R G V +Y+ RDR T
Sbjct: 222 DDLPTLRVTNLSEDADDDDLRELFMRFGRVVRVYVGRDRET 262
>UniRef50_Q8WXF1 Cluster: Paraspeckle component 1; n=27;
Euteleostomi|Rep: Paraspeckle component 1 - Homo sapiens
(Human)
Length = 523
Score = 36.3 bits (80), Expect = 0.13
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 242
L V NL T ED +R+FER GE +++I RDR
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDR 117
>UniRef50_A2YR27 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 221
Score = 35.9 bits (79), Expect = 0.17
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
PPP+ D +L + L+ RTT + L+ F + GEV + DR T
Sbjct: 28 PPPKADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVT 73
>UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10;
Bacteria|Rep: Putative RNA-binding protein rbpF -
Anabaena sp. (strain PCC 7120)
Length = 105
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 135 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
+S+ V NL+Y T ED+ VF G V + +P DR T
Sbjct: 1 MSIYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRET 38
>UniRef50_A4RWB3 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 92
Score = 35.5 bits (78), Expect = 0.23
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 135 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
VS+ V N+++ +D+R F+ G V D+Y+P+DR T
Sbjct: 1 VSVLVRNISFDAHEDDIRDKFQAYGNVLDVYMPKDRET 38
>UniRef50_Q4MZK1 Cluster: Nucleic acid binding factor, putative;
n=2; Theileria|Rep: Nucleic acid binding factor,
putative - Theileria parva
Length = 421
Score = 35.5 bits (78), Expect = 0.23
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
L V + + T+ LR F + GEV D+YIP+D +T++
Sbjct: 340 LFVGRIAFETSVHSLRTYFSQFGEVIDVYIPKDPHTQK 377
>UniRef50_A5JZY0 Cluster: RNA binding protein, putative; n=2;
Eukaryota|Rep: RNA binding protein, putative - Plasmodium
vivax
Length = 1127
Score = 35.5 bits (78), Expect = 0.23
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
L V NL ++ T E+LR++F G + + IP++ Y R
Sbjct: 988 LLVKNLAFQVTKEELRKLFSAFGNIKSVRIPKNAYNR 1024
>UniRef50_Q2GTP8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 250
Score = 35.5 bits (78), Expect = 0.23
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
S+ V N+ Y T+PE+L+ F+ CG + + I D++T
Sbjct: 128 SIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFT 164
>UniRef50_UPI00015B5DA3 Cluster: PREDICTED: similar to CG3335-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG3335-PA - Nasonia vitripennis
Length = 909
Score = 35.1 bits (77), Expect = 0.30
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 153 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
NL+Y T +D+R++FE G + ++ +P D TR+
Sbjct: 365 NLSYTATEDDIRKLFETYGPLSEVNLPIDMVTRK 398
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEV 215
+L V NL +RTT E LR+ F +CG++
Sbjct: 677 TLFVKNLDFRTTEEQLRKHFSKCGKL 702
>UniRef50_Q75EU7 Cluster: AAL018Wp; n=2; Eremothecium gossypii|Rep:
AAL018Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 337
Score = 35.1 bits (77), Expect = 0.30
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDI 224
S+ + NLTY TTPEDLR++F GEVG +
Sbjct: 8 SVFIGNLTYDTTPEDLRQLF---GEVGHV 33
>UniRef50_A3LV94 Cluster: U4/U6 snRNA-associated splicing factor;
n=1; Pichia stipitis|Rep: U4/U6 snRNA-associated
splicing factor - Pichia stipitis (Yeast)
Length = 837
Score = 35.1 bits (77), Expect = 0.30
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 114 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
PPR + +KV+NLT T D+ R F CG + ++ I + T E
Sbjct: 456 PPRSRENLMVKVENLTSDVTRNDITRFFSDCGSIRELSIVENSATIE 502
>UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:
RNA-binding protein - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 95
Score = 34.7 bits (76), Expect = 0.40
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 123 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
+DGM + V NL+YR T ++L VF + G+V + I DR T +S
Sbjct: 1 MDGM-KIYVGNLSYRMTADELTTVFSQFGQVDKVDIIIDRDTGQS 44
>UniRef50_Q6AWW6 Cluster: At2g47310; n=2; Arabidopsis thaliana|Rep:
At2g47310 - Arabidopsis thaliana (Mouse-ear cress)
Length = 512
Score = 34.7 bits (76), Expect = 0.40
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 126 DGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
DG ++ L V ++ T D+R+VFE+ G V +I +P+D+ T E
Sbjct: 106 DGSIAKLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGE 149
>UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 288
Score = 34.7 bits (76), Expect = 0.40
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 123 IDGMVS--LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
+DG S L V N+ + TT EDLR +F CG V + IP R R
Sbjct: 3 VDGGSSARLYVGNIPWSTTIEDLRELFAECGGVTRVDIPTGRQGR 47
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 117 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEV 215
P + + V NL + TT EDLR+VF++ G V
Sbjct: 203 PENSSGLQIVVRNLPWTTTSEDLRQVFQQVGNV 235
>UniRef50_Q7R874 Cluster: RNA recognition motif, putative; n=6;
Plasmodium (Vinckeia)|Rep: RNA recognition motif,
putative - Plasmodium yoelii yoelii
Length = 767
Score = 34.7 bits (76), Expect = 0.40
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
L V NL ++ T E+L+++F G + ++ IP++ Y R
Sbjct: 630 LLVKNLAFQVTKEELKKLFSAFGNIKNVRIPKNAYNR 666
>UniRef50_Q4UI71 Cluster: RNA-binding (SR) protein, putative; n=2;
Theileria|Rep: RNA-binding (SR) protein, putative -
Theileria annulata
Length = 303
Score = 34.7 bits (76), Expect = 0.40
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 138 SLKV--DNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
SLK+ LT TTPEDL+ F + GEV I RD+ T S
Sbjct: 27 SLKIFAGGLTRSTTPEDLKEYFSKYGEVTHTEIVRDKNTGRS 68
>UniRef50_A7AT82 Cluster: RNA recognition motif containing protein;
n=1; Babesia bovis|Rep: RNA recognition motif containing
protein - Babesia bovis
Length = 253
Score = 34.7 bits (76), Expect = 0.40
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 239
S+ + NL Y T ++R FE G++ D+Y+P+D
Sbjct: 10 SVLIRNLKYSTRASEVREAFECFGKIRDVYLPQD 43
>UniRef50_A0DWV5 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_67,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 656
Score = 34.7 bits (76), Expect = 0.40
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 242
L V N+ Y +T ++L+ VFE+ G V I IP+ R
Sbjct: 193 LYVTNIPYTSTEQELKTVFEKYGTVSSIKIPKQR 226
Score = 30.3 bits (65), Expect = 8.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 135 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 242
+++ V N+ +R DL +F R G+V +Y+ +R
Sbjct: 386 ITIFVKNIQFRVNETDLNELFSRYGQVNKVYLAPNR 421
>UniRef50_Q9P383 Cluster: Nuclear cap-binding complex small subunit;
n=1; Schizosaccharomyces pombe|Rep: Nuclear cap-binding
complex small subunit - Schizosaccharomyces pombe
(Fission yeast)
Length = 182
Score = 34.7 bits (76), Expect = 0.40
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
V NL++ TT E + +F +CGE+ I + DR+T+
Sbjct: 36 VGNLSFYTTEEQIYALFSKCGEIRRIIMGVDRFTK 70
>UniRef50_A5DDT0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 886
Score = 34.7 bits (76), Expect = 0.40
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +3
Query: 96 MSYGRPPPRIDGMVSLK-----VDNLTYRTTPEDLRRVFERCGEVGDIYIP 233
++ RPP +I+ + V NL Y TT +LR VFE+ GE+ +I +P
Sbjct: 671 VAISRPPKKIETRKQVMHRQVCVKNLDYYTTESELRTVFEKHGELEEISLP 721
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 108 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGD 221
+P R + +KV+N+ T DL+ +F CGE+ D
Sbjct: 510 KPAARNRESLKIKVENIPKSATENDLKLIFSDCGEIAD 547
>UniRef50_UPI000023E598 Cluster: hypothetical protein FG10156.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10156.1 - Gibberella zeae PH-1
Length = 420
Score = 34.3 bits (75), Expect = 0.53
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEV 215
V N+ ++TT EDL R FE+CGE+
Sbjct: 236 VGNMGFKTTDEDLSRNFEKCGEI 258
>UniRef50_Q5TTQ2 Cluster: ENSANGP00000026814; n=3;
Endopterygota|Rep: ENSANGP00000026814 - Anopheles
gambiae str. PEST
Length = 358
Score = 34.3 bits (75), Expect = 0.53
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
L + L YRTT + L+ FE+ G+V D+ + +D T+ S
Sbjct: 29 LFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRS 67
>UniRef50_A7AN88 Cluster: RNA recognition motif domain containing
protein; n=1; Babesia bovis|Rep: RNA recognition motif
domain containing protein - Babesia bovis
Length = 643
Score = 34.3 bits (75), Expect = 0.53
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
+ NL+Y TT E +R +F CGEV IP+
Sbjct: 481 IRNLSYNTTEETMRELFSECGEVIRCVIPK 510
>UniRef50_UPI0000546443 Cluster: PREDICTED: hypothetical protein;
n=3; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 163
Score = 33.9 bits (74), Expect = 0.70
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
S+ V N+ Y T ++L F CG V + IP +R+T
Sbjct: 38 SIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFT 74
>UniRef50_P73557 Cluster: RNA-binding protein; n=2;
Chroococcales|Rep: RNA-binding protein - Synechocystis
sp. (strain PCC 6803)
Length = 83
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 135 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
+S+ V NL+Y+ T +D+ VF G V + +P DR T
Sbjct: 1 MSIYVGNLSYQATEDDVLTVFSEYGTVKRVQLPTDRET 38
>UniRef50_Q9FIU6 Cluster: Similarity to RNA-binding protein; n=4;
Magnoliophyta|Rep: Similarity to RNA-binding protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 156
Score = 33.9 bits (74), Expect = 0.70
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 117 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 242
P+ + +L V L+ RTT E LR F + GEV D + DR
Sbjct: 50 PQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDR 91
>UniRef50_Q94AC3 Cluster: AT4g36960/C7A10_400; n=11;
Magnoliophyta|Rep: AT4g36960/C7A10_400 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 379
Score = 33.9 bits (74), Expect = 0.70
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 102 YGRPPPRIDGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 239
YGR P G+ + + V L + +DLR F R G + D YIP+D
Sbjct: 228 YGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKD 274
Score = 30.3 bits (65), Expect = 8.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 180 DLRRVFERCGEVGDIYIPRDRYTRE 254
D R FER GE+ D+Y+P+D +++
Sbjct: 106 DFRSHFERYGEITDLYMPKDYNSKQ 130
>UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP1;
n=3; Arabidopsis thaliana|Rep:
Phragmoplastin-interacting protein PHIP1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 597
Score = 33.9 bits (74), Expect = 0.70
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +3
Query: 93 KMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
K S G P +DG + + NL + TT D+R++F C + + + +++ T E
Sbjct: 248 KTSSGFAPEMVDGYNRVYIGNLAWDTTERDIRKLFSDC-VINSVRLGKNKETGE 300
>UniRef50_O23189 Cluster: RNA-binding like protein; n=1; Arabidopsis
thaliana|Rep: RNA-binding like protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 306
Score = 33.9 bits (74), Expect = 0.70
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 102 YGRPPPRIDGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 239
YGR P G+ + + V L + +DLR F R G + D YIP+D
Sbjct: 172 YGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKD 218
>UniRef50_A7PHW6 Cluster: Chromosome chr13 scaffold_17, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr13 scaffold_17, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 33.9 bits (74), Expect = 0.70
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
V NL Y T DL +F G+V + I +DR+TR S
Sbjct: 118 VSNLDYTLTNSDLFTIFSTFGKVAKVTILKDRHTRHS 154
>UniRef50_A7RLV0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 862
Score = 33.9 bits (74), Expect = 0.70
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 153 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
NL Y + ED++ +FE+ G + ++ +P D++T ++
Sbjct: 369 NLAYSCSEEDIQHLFEKFGPLSEVNLPLDKHTNKT 403
>UniRef50_O14327 Cluster: Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)- binding protein
II); n=22; Eukaryota|Rep: Polyadenylate-binding protein
2 (Poly(A)-binding protein 2) (Poly(A)- binding protein
II) - Schizosaccharomyces pombe (Fission yeast)
Length = 166
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
S+ V N+ Y TPE+L+ F CG V + I D++T
Sbjct: 56 SVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFT 92
>UniRef50_UPI0000E47947 Cluster: PREDICTED: similar to GA10247-PA;
n=4; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to GA10247-PA - Strongylocentrotus purpuratus
Length = 519
Score = 33.5 bits (73), Expect = 0.93
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
L + LT TT EDL +F + GEV D++IP+
Sbjct: 207 LFIGRLTSDTTKEDLFDIFSKYGEVVDVFIPK 238
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 135 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
V L V L Y TT E+++ F + GE+ ++ RD T++S
Sbjct: 119 VDLIVLGLDYNTTDEEMKEYFGKYGELLMAHVKRDPVTQKS 159
>UniRef50_Q39SC4 Cluster: RNA-binding region RNP-1; n=2;
Geobacter|Rep: RNA-binding region RNP-1 - Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Length = 134
Score = 33.5 bits (73), Expect = 0.93
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V +++Y T +DLRR+F G V +++ DR T E +EA+++L
Sbjct: 7 LYVGHMSYEATEDDLRRLFTVAGTVTSVHLITDRDTGEFKGCGYVRMATIEEAKEAVETL 66
>UniRef50_A4RUB8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 319
Score = 33.5 bits (73), Expect = 0.93
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD 314
+L V N++ R LRR+FE CGEV + RD T +S E+A++
Sbjct: 21 NLYVKNISERVDELTLRRLFEACGEVQSCCVIRDVSTNKSRGFGFVKFVSTARAEDAIE 79
>UniRef50_Q17DU7 Cluster: RNA binding motif protein; n=3;
Culicidae|Rep: RNA binding motif protein - Aedes aegypti
(Yellowfever mosquito)
Length = 860
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 153 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
NL Y +DL+++FE+ G V +I +P D TR+
Sbjct: 309 NLAYSVKEDDLKQLFEKYGPVAEIDLPIDSNTRK 342
>UniRef50_A7RXA3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 470
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDI-YIPRDR 242
+L + N+ T E+L +FE CG+V D ++P+DR
Sbjct: 395 TLHLSNIPESVTEEELTSMFEDCGDVADFRFLPKDR 430
>UniRef50_Q4PBU3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 588
Score = 33.5 bits (73), Expect = 0.93
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
+ L + TT + LRR F + GEVG+ I RD T S
Sbjct: 173 IGGLNWDTTEDSLRRYFSQFGEVGNCAIMRDNMTGRS 209
>UniRef50_UPI000051A8B9 Cluster: PREDICTED: similar to CG1316-PA;
n=2; Endopterygota|Rep: PREDICTED: similar to CG1316-PA
- Apis mellifera
Length = 482
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +3
Query: 177 EDLRRVFERCGEVGDIYIPRDRYTRES 257
+DLR+ FE+ G++ DI++ +DR T E+
Sbjct: 39 DDLRKAFEKFGKIEDIWVVKDRITGEN 65
>UniRef50_Q74DJ2 Cluster: RNA-binding protein; n=2; Geobacter|Rep:
RNA-binding protein - Geobacter sulfurreducens
Length = 107
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V +++Y T +DLRR+F G V ++I D T S +EA+++L
Sbjct: 5 LYVGHMSYEATEDDLRRLFSVAGTVTSVHIITDPETGRSKGCGYVRMLTEEEAKEAIETL 64
>UniRef50_Q9ZVW9 Cluster: Putative splicing factor; n=3; Arabidopsis
thaliana|Rep: Putative splicing factor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 561
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 117 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 239
P G L V NL + +DLR+VFE G V + +PRD
Sbjct: 279 PYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD 319
>UniRef50_Q9LU62 Cluster: Similarity to poly(A)-binding protein II;
n=17; Magnoliophyta|Rep: Similarity to poly(A)-binding
protein II - Arabidopsis thaliana (Mouse-ear cress)
Length = 267
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRY 245
S+ V N+ Y TPE++++ F+ CG V + I D++
Sbjct: 104 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF 139
>UniRef50_Q9CAE4 Cluster: Putative uncharacterized protein
F13M14.33; n=5; Magnoliophyta|Rep: Putative
uncharacterized protein F13M14.33 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 261
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
+L V NL + T D+ +F G+V + + +DR+TR+S
Sbjct: 58 TLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQS 97
>UniRef50_Q8I5N6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1119
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
L V NL ++ E+LR++F G V + IP++ Y R
Sbjct: 985 LVVKNLAFQVNKEELRKLFSAFGNVKSVRIPKNVYNR 1021
>UniRef50_Q4QHE5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 950
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 99 SYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
S R PP D L V NL + T +D+R +F E+ + +PR +T S
Sbjct: 853 SASRVPPGSDPQ-KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSS 904
>UniRef50_Q4H2Q6 Cluster: Ci-Tardbp protein; n=1; Ciona
intestinalis|Rep: Ci-Tardbp protein - Ciona intestinalis
(Transparent sea squirt)
Length = 440
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIP 233
V +T + T +++R+ FE+ G+V D+YIP
Sbjct: 227 VGRITEKMTKDEIRQYFEQFGDVDDVYIP 255
>UniRef50_Q5KLP3 Cluster: Poly(A) binding protein, putative; n=1;
Filobasidiella neoformans|Rep: Poly(A) binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 210
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 132 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
M S+ + N+ Y TPE+++ F+ CG + + I D++T
Sbjct: 92 MRSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFT 130
>UniRef50_Q2H622 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 361
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
L + N+ Y TT +L R+F+ G V D+ + DR T
Sbjct: 233 LFIGNIPYETTDAELNRIFQGMGNVKDVRVAVDRTT 268
>UniRef50_A1CJX8 Cluster: Glycine-rich RNA-binding protein,
putative; n=2; Aspergillus|Rep: Glycine-rich RNA-binding
protein, putative - Aspergillus clavatus
Length = 133
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 132 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEAL 311
M L + L + TT + LR+ FE+ G+V + + +DR T S ++A+
Sbjct: 1 MSKLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAM 60
Query: 312 DSL 320
D++
Sbjct: 61 DAM 63
>UniRef50_Q9VZE4 Cluster: CG1316-PA; n=5; Diptera|Rep: CG1316-PA -
Drosophila melanogaster (Fruit fly)
Length = 470
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 171 TPEDLRRVFERCGEVGDIYIPRDRYTRES 257
T ED R F GE+ DI++ +D++T+E+
Sbjct: 39 TEEDFREAFSPYGEIEDIWVVKDKHTQEN 67
>UniRef50_Q5CX28 Cluster: RRM domain containing protein; T22E16.120
Sc35-like splicing factor; n=3; Cryptosporidium|Rep: RRM
domain containing protein; T22E16.120 Sc35-like splicing
factor - Cryptosporidium parvum Iowa II
Length = 344
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
SL + +L + T +RR FER G + D+Y+P D +R
Sbjct: 28 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSR 65
>UniRef50_O44530 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 177
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
S+ V N+ +++T ++ F CG+V + IP+D++T
Sbjct: 47 SVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFT 83
>UniRef50_A5K494 Cluster: Nucleic acid binding factor, putative;
n=2; Plasmodium|Rep: Nucleic acid binding factor,
putative - Plasmodium vivax
Length = 753
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 239
L V L TT E LR FE GE+ DIY+P D
Sbjct: 665 LFVTKLNSVTTIETLRNYFEAFGEIIDIYMPND 697
>UniRef50_A2EJG8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 108
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 132 MVSLKVDNLTYRTTPEDLRRVFERCGEV 215
M + + NL++RTTP+DL R F GE+
Sbjct: 1 MSQVSITNLSFRTTPDDLYRAFSPFGEL 28
>UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 341
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 239
+L + NL Y T E L++VF R GEV + I D
Sbjct: 150 TLYIGNLYYEVTTEQLQKVFSRFGEVASVKIVYD 183
>UniRef50_P48810 Cluster: Heterogeneous nuclear ribonucleoprotein
87F; n=16; Coelomata|Rep: Heterogeneous nuclear
ribonucleoprotein 87F - Drosophila melanogaster (Fruit
fly)
Length = 385
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
L + L YRTT + L+ FE+ G + D+ + +D T+ S
Sbjct: 26 LFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRS 64
>UniRef50_A0WC53 Cluster: RNA-binding region RNP-1; n=2;
Desulfuromonadales|Rep: RNA-binding region RNP-1 -
Geobacter lovleyi SZ
Length = 109
Score = 32.3 bits (70), Expect = 2.1
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDSL 320
L V +L Y T +DLRR+F G V ++I D T +S EA++ L
Sbjct: 5 LYVGHLPYEATADDLRRMFSVAGTVTSVHIITDPATGKSKGCGYVRMADEAQLHEAIECL 64
>UniRef50_A7QT53 Cluster: Chromosome undetermined scaffold_165,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_165, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 209
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRY 245
S+ V N+ Y TPE++++ F+ CG V + I ++Y
Sbjct: 35 SVFVGNVDYSCTPEEVQQHFQACGTVNRVTIRSNKY 70
>UniRef50_Q5CWM4 Cluster: U2 snRNP. Hsh49p, RRM domain containing
protein; n=3; Cryptosporidium|Rep: U2 snRNP. Hsh49p, RRM
domain containing protein - Cryptosporidium parvum Iowa
II
Length = 216
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
+L NL + E L +F +CG V ++IPRD+ T
Sbjct: 24 TLYCGNLENKVDEEMLAELFSQCGPVKSVHIPRDKVT 60
>UniRef50_Q5CWK5 Cluster: 5x RRM. Mrd1p like, splicing related; n=3;
Cryptosporidium|Rep: 5x RRM. Mrd1p like, splicing
related - Cryptosporidium parvum Iowa II
Length = 806
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
L V N++Y TT EDL + F + GEV + I R
Sbjct: 289 LMVVNISYSTTEEDLNKFFSKWGEVKSVNIIR 320
>UniRef50_Q5CRV5 Cluster: SPAC25G10.01-like RRM domain containing
protein; n=2; Cryptosporidium|Rep: SPAC25G10.01-like RRM
domain containing protein - Cryptosporidium parvum Iowa
II
Length = 253
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
D +L V L+ +T +DLRR+FE GEV D ++ + + ES
Sbjct: 68 DPSCTLYVCRLSLKTKEDDLRRLFEDYGEVTDCHLVTNPLSGES 111
>UniRef50_Q4UFE0 Cluster: Nucleolar, RNA-binding protein, putative;
n=2; Theileria|Rep: Nucleolar, RNA-binding protein,
putative - Theileria annulata
Length = 560
Score = 32.3 bits (70), Expect = 2.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
+ NL + ++ E LR +F CG+V Y+P+
Sbjct: 425 IRNLNFNSSEEGLRELFSECGQVTRCYVPK 454
>UniRef50_UPI00015B633B Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 552
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 105 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYI 230
GRP D L + NL + + DLR+VFER G V D+ +
Sbjct: 446 GRPGGYTDAH-QLFLGNLPHNASESDLRQVFERYGRVADLRV 486
>UniRef50_UPI00015B6013 Cluster: PREDICTED: similar to GA12086-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA12086-PA - Nasonia vitripennis
Length = 489
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 177 EDLRRVFERCGEVGDIYIPRDRYTRES 257
E+LR+ FE+ G + DI++ +DR T E+
Sbjct: 40 EELRKAFEKFGNIEDIWVVKDRNTGEN 66
>UniRef50_UPI0001560A8A Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 221
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYI 230
+L V NL++ TT E + +F RCG+V ++++
Sbjct: 97 TLYVGNLSFYTTEEHVLELFSRCGDVKNVFM 127
>UniRef50_UPI0000DB6CD5 Cluster: PREDICTED: similar to no on or off
transient A CG4211-PB, isoform B; n=1; Apis
mellifera|Rep: PREDICTED: similar to no on or off
transient A CG4211-PB, isoform B - Apis mellifera
Length = 565
Score = 31.9 bits (69), Expect = 2.8
Identities = 10/41 (24%), Positives = 27/41 (65%)
Frame = +3
Query: 120 RIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 242
+ G L + NLT T E+++++F++ GE+ ++++ +++
Sbjct: 145 KFSGRNRLYIGNLTNDVTEEEIQQMFQQYGEISELFVNKEK 185
>UniRef50_UPI000058483A Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 341
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 239
PP R G L V ++ R DL R F+R G + D+++ R+
Sbjct: 4 PPDRAFGGYRLFVGDIGTRVGKNDLEREFDRYGPITDVWVARN 46
>UniRef50_Q569S7 Cluster: LOC443584 protein; n=5; Xenopus|Rep:
LOC443584 protein - Xenopus laevis (African clawed frog)
Length = 414
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
D S V NL Y E +R+ F +CG+V + I RD+ T
Sbjct: 270 DNKRSAFVGNLPYDIEEESIRKHFSQCGDVQGVRIIRDQKT 310
>UniRef50_Q02AB7 Cluster: RNP-1 like RNA-binding protein; n=2;
cellular organisms|Rep: RNP-1 like RNA-binding protein -
Solibacter usitatus (strain Ellin6076)
Length = 132
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 132 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEAL 311
M ++ V NL + + E +R +FER G+V I DR T S ++A+
Sbjct: 1 MKNIFVGNLDFNASEEGVRSLFERYGQVNSARIMTDRETGRSRGFAFVEMENEGEADQAI 60
Query: 312 DSL 320
+L
Sbjct: 61 SAL 63
>UniRef50_Q016G8 Cluster: Initiation factor 3g; n=2;
Ostreococcus|Rep: Initiation factor 3g - Ostreococcus
tauri
Length = 311
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALDS 317
S++V NL+ T +DL+ +F G V IY+ +R T E+ + A+D
Sbjct: 229 SIRVSNLSEDTREQDLQELFRPFGPVTRIYVAINRDTGEARGFAFVNMVNREDGQRAIDK 288
Query: 318 L 320
L
Sbjct: 289 L 289
>UniRef50_Q6UDW5 Cluster: Erythrocyte membrane protein 1; n=5;
Plasmodium falciparum|Rep: Erythrocyte membrane protein 1
- Plasmodium falciparum
Length = 3027
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 114 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYI 230
PPR + + + L +T+PEDLR+ F +C V ++
Sbjct: 1679 PPRRQKLCVINLKFLNEKTSPEDLRKAFIQCAAVETFFL 1717
>UniRef50_Q57W18 Cluster: RNA-binding protein, putative; n=1;
Trypanosoma brucei|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 857
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 114 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
PP DG+ L V N+ + T D+R +F EV + +PR
Sbjct: 764 PPGCDGL-KLVVKNVPFEATERDIRDLFTAVSEVRSVRLPR 803
>UniRef50_Q1HE01 Cluster: Cbp20; n=6; Eukaryota|Rep: Cbp20 - Bombyx
mori (Silk moth)
Length = 154
Score = 31.9 bits (69), Expect = 2.8
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
+L + NL++ TT E + ++ RCG++ + + D+Y +
Sbjct: 31 TLYMGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKK 68
>UniRef50_Q17GF4 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 963
Score = 31.9 bits (69), Expect = 2.8
Identities = 11/43 (25%), Positives = 28/43 (65%)
Frame = +3
Query: 87 IIKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEV 215
+I++S+ P +++ ++++D++ T E++R FE+ GE+
Sbjct: 102 LIRVSHVLEPVKLNYAAAIRIDDIAAGVTEEEIREHFEQAGEI 144
>UniRef50_Q5VVE2 Cluster: SMART/HDAC1 associated repressor protein;
n=5; Euteleostomi|Rep: SMART/HDAC1 associated repressor
protein - Homo sapiens (Human)
Length = 296
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
+L + NL TT DLR +F+R GE+ DI I +
Sbjct: 178 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 210
>UniRef50_Q9C222 Cluster: Putative uncharacterized protein B8L3.050;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein B8L3.050 - Neurospora crassa
Length = 488
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 129 GMVSLKVDNLTYRTTPEDLRRVFERCGEV 215
G + V NL++ TT +DLR F++CG +
Sbjct: 287 GSTKIFVGNLSFDTTEDDLRNHFDKCGAI 315
>UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;
Bacteria|Rep: Putative RNA-binding protein rbpA -
Anabaena sp. (strain PCC 7120)
Length = 102
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 135 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
+S+ V NL+Y T + L VF G V + +P DR T
Sbjct: 1 MSIYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRET 38
>UniRef50_Q96T58 Cluster: Msx2-interacting protein; n=14;
Eutheria|Rep: Msx2-interacting protein - Homo sapiens
(Human)
Length = 3664
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
+L + NL TT DLR +F+R GE+ DI I +
Sbjct: 439 TLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKK 471
>UniRef50_Q7ZWE3 Cluster: La-related protein 7; n=3;
Clupeocephala|Rep: La-related protein 7 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 555
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +3
Query: 93 KMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
K G P +D ++ V+ L T L RVF +CG V I IPR + TR S
Sbjct: 120 KEPLGETPKDVDSR-TVYVELLPKTVTHIWLERVFSKCGHVVYISIPRYKSTRHS 173
>UniRef50_P38922 Cluster: Protein HRB1; n=6; Saccharomycetales|Rep:
Protein HRB1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 454
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEV 215
S+ V NLTY +TPEDL F + G+V
Sbjct: 162 SIFVGNLTYDSTPEDLTEFFSQIGKV 187
>UniRef50_Q4S8N9 Cluster: Chromosome 7 SCAF14703, whole genome
shotgun sequence; n=4; Clupeocephala|Rep: Chromosome 7
SCAF14703, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 157
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
+ L+++T+P+ LR F + GE+ + + RD T+ S
Sbjct: 25 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRS 61
>UniRef50_Q8CD63 Cluster: 13 days embryo male testis cDNA, RIKEN
full-length enriched library, clone:6030413L18
product:Musashi homolog 2 (Drosophila), full insert
sequence; n=3; Deuterostomia|Rep: 13 days embryo male
testis cDNA, RIKEN full-length enriched library,
clone:6030413L18 product:Musashi homolog 2 (Drosophila),
full insert sequence - Mus musculus (Mouse)
Length = 192
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
+ L+++T+P+ LR F + GE+ + + RD T+ S
Sbjct: 25 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRS 61
>UniRef50_Q32LZ4 Cluster: Msi2h protein; n=4; Eutheria|Rep: Msi2h
protein - Mus musculus (Mouse)
Length = 193
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
+ L+++T+P+ LR F + GE+ + + RD T+ S
Sbjct: 25 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRS 61
>UniRef50_A7RXI1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 424
Score = 31.5 bits (68), Expect = 3.7
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 165 RTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
R ED+R FE+ G + D+++ +D+ T+E+
Sbjct: 27 RHNAEDIRSAFEQYGTIEDVWVVKDKATKEN 57
>UniRef50_A7AW01 Cluster: RNA recognition motif domain containing
protein; n=1; Babesia bovis|Rep: RNA recognition motif
domain containing protein - Babesia bovis
Length = 279
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
V NL Y T +LR + + CG + I +DR T +S
Sbjct: 25 VGNLPYEITEIELRNILQGCGNIRFAIIRKDRQTNKS 61
>UniRef50_A2EQG8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 332
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 168 TTPED-LRRVFERCGEVGDIYIPRDRYTRES 257
T ED LR++F GE+ + IPRDR T +S
Sbjct: 181 TVTEDMLRKLFSNAGEIDHVKIPRDRETGKS 211
>UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 31.5 bits (68), Expect = 3.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
+ NL Y D+ VF + GE+ D+++ RD+ T +S
Sbjct: 33 IANLNYAMNEGDIAIVFSQYGEIVDVHLVRDKITGKS 69
>UniRef50_Q96V40 Cluster: Peptidyl-prolyl cis-trans isomerase; n=1;
Pichia angusta|Rep: Peptidyl-prolyl cis-trans isomerase
- Pichia angusta (Yeast) (Hansenula polymorpha)
Length = 301
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 168 TTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
T +DLR +F+R GE+ + I RDR T S
Sbjct: 223 TAEDDLRLIFQRFGEITSVEIIRDRRTGHS 252
>UniRef50_Q7S1F3 Cluster: Predicted protein; n=4;
Pezizomycotina|Rep: Predicted protein - Neurospora
crassa
Length = 332
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 111 PPPRIDGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
P P D S ++VDN+ Y T EDL +F R G + + + DR R
Sbjct: 88 PEPFSDARGSKIRVDNIHYELTQEDLEGLFSRIGPLVKLDMKYDRAGR 135
>UniRef50_Q6FS32 Cluster: Similar to sp|P38922 Saccharomyces
cerevisiae YNL004w HRB1; n=1; Candida glabrata|Rep:
Similar to sp|P38922 Saccharomyces cerevisiae YNL004w
HRB1 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 443
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEV 215
S+ V NLTY TPEDL+ F + G+V
Sbjct: 108 SIFVGNLTYDCTPEDLKDFFSQVGKV 133
>UniRef50_Q5K911 Cluster: Telomere maintenance protein, putative;
n=2; Filobasidiella neoformans|Rep: Telomere maintenance
protein, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 951
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEV--GDIYIPRDRYTR 251
DG V+L V NL YR +DL+ +F + G V D+ + D +R
Sbjct: 168 DGRVNLFVGNLPYRVRWQDLKDLFRKAGTVLRADVSLGPDNRSR 211
>UniRef50_Q09301 Cluster: Putative RNA-binding protein EEED8.12;
n=4; Caenorhabditis|Rep: Putative RNA-binding protein
EEED8.12 - Caenorhabditis elegans
Length = 197
Score = 31.5 bits (68), Expect = 3.7
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
S+ + N+ + +T E++ F+ CG + IP+D++T++
Sbjct: 62 SVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKK 100
>UniRef50_Q57014 Cluster: Putative RNA-binding protein rbpA; n=70;
cellular organisms|Rep: Putative RNA-binding protein
rbpA - Synechocystis sp. (strain PCC 6803)
Length = 101
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 135 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
+S+ V NL+Y + DL VF G V + +P DR T
Sbjct: 1 MSIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRET 38
>UniRef50_Q4SJ02 Cluster: Chromosome 21 SCAF14577, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 21 SCAF14577, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 278
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
V L Y TT LR+ FE GE+ + + DR T +S
Sbjct: 15 VGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKS 51
>UniRef50_A5Z3T7 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 213
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -3
Query: 314 VQGFFSISAV---KESYESKTSTFSCVTISGYVDITDLSASFKYAT 186
+ G+F I++ KES E + ST + I Y D+T +S +++ AT
Sbjct: 19 IGGYFGITSYYKNKESNEKEASTIKVLEIENYKDLTKVSYNYEDAT 64
>UniRef50_Q9SJT4 Cluster: Expressed protein; n=1; Arabidopsis
thaliana|Rep: Expressed protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1003
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 239
L + NL ++ P D++ VF G V D++IP++
Sbjct: 333 LIIRNLPFQAKPSDIKVVFSAVGFVWDVFIPKN 365
>UniRef50_A3AAN7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 304
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
V L + TT E LRR ++R GE+ + + DR++ S
Sbjct: 41 VGGLAWETTSERLRRFYDRFGEILEAVVITDRHSGRS 77
>UniRef50_Q8I2R8 Cluster: RNA-binding protein, putative; n=5;
Plasmodium|Rep: RNA-binding protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 202
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
S+ V N+ Y T PE+L+ +F CG + + I ++ T S
Sbjct: 72 SIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHS 111
>UniRef50_Q5BXS3 Cluster: SJCHGC01369 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01369 protein - Schistosoma
japonicum (Blood fluke)
Length = 386
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 120 RIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
R D + V LT +PE LR+ F + G V D++IP+
Sbjct: 185 RQDVARKVHVGGLTEDISPETLRQHFSQYGRVSDVFIPK 223
>UniRef50_Q57YP5 Cluster: RNA-binding protein, putative; n=1;
Trypanosoma brucei|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 184
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 144 KVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
K DN TTPE+L +F CG + + + RDR T E
Sbjct: 113 KGDNGGPTTTPEELAHLFADCGPILNCTLLRDRTTGE 149
>UniRef50_Q4N8H4 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
parva
Length = 539
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
P P +D + L V + DLRR+F+ G V D+ + RD+ T
Sbjct: 131 PAPAVD--IKLFVARIPKTYEESDLRRLFQEFGPVKDVIVIRDKVT 174
>UniRef50_Q23RL2 Cluster: Nucleolar phosphoprotein, putative; n=2;
Tetrahymena thermophila|Rep: Nucleolar phosphoprotein,
putative - Tetrahymena thermophila SB210
Length = 491
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYI 230
V NL++RT E L++ F CG+V D I
Sbjct: 374 VGNLSFRTDKETLKKFFASCGKVADARI 401
>UniRef50_A7RU25 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 291
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 108 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
RP ++ L V L TT + L F + GEV D+YIP+
Sbjct: 190 RPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPK 232
>UniRef50_Q8IY53 Cluster: Putative uncharacterized protein; n=1;
Homo sapiens|Rep: Putative uncharacterized protein -
Homo sapiens (Human)
Length = 248
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3
Query: 171 TPED-LRRVFERCGEVGDIYIPRDRYTRES 257
TPE LR F G++ DI++ RD++T+ES
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKES 65
>UniRef50_Q4PFW3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 356
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
L ++NL Y + DL+ +FE G V YI DR R +
Sbjct: 153 LIIENLHYDVSESDLKNLFESIGPVTKAYIRYDRSDRST 191
>UniRef50_Q2UQ21 Cluster: Predicted protein; n=3;
Pezizomycotina|Rep: Predicted protein - Aspergillus
oryzae
Length = 127
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 132 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
M L + L + TT E LR FE+ G V + + +DR T S
Sbjct: 1 MSKLFIGGLAWHTTDESLRSGFEKYGAVEEAIVVKDRDTGRS 42
>UniRef50_A1C7B3 Cluster: Putative uncharacterized protein; n=1;
Aspergillus clavatus|Rep: Putative uncharacterized
protein - Aspergillus clavatus
Length = 613
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 216 RPLRIFQIRDGDLQESSDKLNCPLLVKPCRQYAA 115
+PLRI + D SS +L+ PL+VKPC + +
Sbjct: 295 QPLRIKTVADLQSHLSSSQLDYPLIVKPCTAWGS 328
>UniRef50_Q8IUH3 Cluster: RNA-binding protein 45; n=27;
Euteleostomi|Rep: RNA-binding protein 45 - Homo sapiens
(Human)
Length = 476
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3
Query: 171 TPED-LRRVFERCGEVGDIYIPRDRYTRES 257
TPE LR F G++ DI++ RD++T+ES
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKES 65
>UniRef50_P25555 Cluster: Single-strand telomeric DNA-binding
protein GBP2; n=2; Saccharomyces cerevisiae|Rep:
Single-strand telomeric DNA-binding protein GBP2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 427
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEV 215
S+ V NLT+ TPEDL+ +F GEV
Sbjct: 123 SIFVRNLTFDCTPEDLKELFGTVGEV 148
>UniRef50_P41891 Cluster: Protein gar2; n=12; Ascomycota|Rep:
Protein gar2 - Schizosaccharomyces pombe (Fission yeast)
Length = 500
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 239
V NL++ T +DL F CG++ I +P D
Sbjct: 370 VGNLSFNATEDDLSTAFGGCGDIQSIRLPTD 400
>UniRef50_Q3WCP4 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 123
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -2
Query: 258 YFLVCNDLWVCRYHR--PLRIFQIRDGDLQESSDKLNCPLLVKP 133
Y L+C L+VC+YH P R +IR DL + L +P
Sbjct: 55 YVLICEHLYVCKYHSEGPCRGQRIRASDLPARPGAIGRCRLTRP 98
>UniRef50_Q2AH97 Cluster: Permease YjgP/YjgQ; n=1; Halothermothrix
orenii H 168|Rep: Permease YjgP/YjgQ - Halothermothrix
orenii H 168
Length = 1040
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 81 VLIIKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVF-ERCGEVGDIYIPRDRYT 248
V I M P P G + LK DN Y E L + + GE G +Y+ DR T
Sbjct: 377 VFFIIMLIFFPSPASAGSLKLKADNYKYHGFEEKLVEITGDVSGEFGKLYLIADRVT 433
>UniRef50_Q6NPL0 Cluster: At4g09040; n=6; Arabidopsis thaliana|Rep:
At4g09040 - Arabidopsis thaliana (Mouse-ear cress)
Length = 304
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDI 224
L N+ + +TPED+R +FE+ G V DI
Sbjct: 96 LIAQNVPWTSTPEDIRSLFEKYGSVIDI 123
>UniRef50_Q0IMD4 Cluster: Os12g0577000 protein; n=8; Oryza
sativa|Rep: Os12g0577000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 980
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
V NL T E LR++FE CGEV + + R
Sbjct: 608 VGNLPANVTEEYLRKLFEHCGEVVRVAVSR 637
>UniRef50_A5BUJ6 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 312
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
V NL + T E L +F + G V ++Y+P+DR T
Sbjct: 29 VGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
>UniRef50_Q8ILQ0 Cluster: Spliceosome-associated protein, putative;
n=6; Plasmodium|Rep: Spliceosome-associated protein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 484
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 242
+L + NL + E L +F +CG V +++IPRD+
Sbjct: 21 TLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDK 55
>UniRef50_Q54CU3 Cluster: Peptidyl-prolyl cis-trans isomerase; n=1;
Dictyostelium discoideum AX4|Rep: Peptidyl-prolyl
cis-trans isomerase - Dictyostelium discoideum AX4
Length = 489
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +3
Query: 108 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
RPP + L V L T EDL VF +CG V + RD+ T +S
Sbjct: 239 RPPDHV-----LFVCKLNPITEAEDLELVFSQCGTVKSCEVVRDKVTNDS 283
>UniRef50_Q54CU2 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 306
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
+L V NL RT DLR F G+V D I D T+ES
Sbjct: 72 TLHVSNLNPRTRESDLRDTFASIGKVIDCTILLDPNTKES 111
>UniRef50_A7AWX8 Cluster: RNA recognition motif. (A.k.a. RRM, RBD,
or RNP) domain containing protein; n=1; Babesia
bovis|Rep: RNA recognition motif. (A.k.a. RRM, RBD, or
RNP) domain containing protein - Babesia bovis
Length = 244
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
+ L Y T DL+ F + G + DI+IPR
Sbjct: 149 ISKLAYEATHNDLQSYFSQFGNITDIHIPR 178
>UniRef50_A7AWX7 Cluster: RNA recognition motif. (A.k.a. RRM, RBD,
or RNP) domain containing protein; n=1; Babesia
bovis|Rep: RNA recognition motif. (A.k.a. RRM, RBD, or
RNP) domain containing protein - Babesia bovis
Length = 110
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
L + L T+ +R F + GE+ + YIPRD YT
Sbjct: 31 LFIGRLDPDTSVGTMRHYFGQFGEIAEAYIPRDSYT 66
>UniRef50_A0BHN3 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 232
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 132 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
M + + L Y + D++ +FE CGE+ I +PR
Sbjct: 1 MYQVFISGLPYTASENDVQSLFEDCGEILSIKLPR 35
>UniRef50_Q6MVP3 Cluster: Related to heterogeneous nuclear
ribonucleoprotein HRP1; n=3; Neurospora crassa|Rep:
Related to heterogeneous nuclear ribonucleoprotein HRP1
- Neurospora crassa
Length = 344
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 239
V N+ + T E L+ FE+ G V D+++ RD
Sbjct: 92 VRNIVFDATEEHLKGAFEKFGNVTDVFLARD 122
>UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n=1;
Schizosaccharomyces pombe|Rep: mRNA cleavage factor
complex subunit - Schizosaccharomyces pombe (Fission
yeast)
Length = 474
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 111 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
P R DG + + L + TT + LR FE+ GEV D + RD T S
Sbjct: 157 PFNREDG--KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRS 203
>UniRef50_A6RY04 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 294
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
++V+N+ Y T E+L +FER G V + + DR R +
Sbjct: 63 VRVENVHYDLTEEELEGLFERIGRVSFLKLDYDRAGRSN 101
>UniRef50_A5DS71 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 857
Score = 30.7 bits (66), Expect = 6.5
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 236
+++ N+ + T ++L+ F CGEV + +PR
Sbjct: 703 IRITNIAFSITEDELKNEFSSCGEVELVVLPR 734
>UniRef50_Q9BX46 Cluster: RNA-binding protein 24; n=52;
Eumetazoa|Rep: RNA-binding protein 24 - Homo sapiens
(Human)
Length = 236
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
V L Y TT LR+ FE GE+ + + DR T +S
Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKS 51
>UniRef50_Q10572 Cluster: Sex determination protein fox-1; n=2;
Caenorhabditis|Rep: Sex determination protein fox-1 -
Caenorhabditis elegans
Length = 415
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYI 230
DG L V N+ +R DL+ +FE+ G V D+ I
Sbjct: 150 DGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEI 184
>UniRef50_UPI0000E47201 Cluster: PREDICTED: similar to
developmentally regulated RNA-binding protein 1; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
developmentally regulated RNA-binding protein 1 -
Strongylocentrotus purpuratus
Length = 507
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 171 TPEDLRRVFERCGEVGDIYIPRDRYTRE 254
T DL+ F + GEV D+++ +D+ TRE
Sbjct: 39 TESDLKDYFGQFGEVEDVFLVKDKVTRE 66
>UniRef50_UPI0000E45F83 Cluster: PREDICTED: similar to neurotrypsin;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to neurotrypsin - Strongylocentrotus purpuratus
Length = 516
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDI 224
V NL Y T + +R+VF CG V D+
Sbjct: 70 VKNLGYNVTEKRIRKVFSECGTVRDV 95
>UniRef50_UPI0000E45F82 Cluster: PREDICTED: hypothetical protein;
n=6; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 890
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 147 VDNLTYRTTPEDLRRVFERCGEVGDI 224
V NL Y T + +R+VF CG V D+
Sbjct: 622 VKNLGYNVTEKRIRKVFSECGTVRDV 647
>UniRef50_Q11SF1 Cluster: RNA binding protein; n=6; Bacteria|Rep:
RNA binding protein - Cytophaga hutchinsonii (strain
ATCC 33406 / NCIMB 9469)
Length = 143
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 135 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESXXXXXXXXXXXXXXEEALD 314
+++ V +L + +LR FE GEV + I D++T S ++A+D
Sbjct: 1 MNIFVGSLPFSLEENELREFFEEYGEVSSVKIISDKFTGRSKGFGFVEMPDDAAAQKAID 60
Query: 315 SL 320
L
Sbjct: 61 EL 62
>UniRef50_Q0YR84 Cluster: Putative uncharacterized protein; n=1;
Chlorobium ferrooxidans DSM 13031|Rep: Putative
uncharacterized protein - Chlorobium ferrooxidans DSM
13031
Length = 489
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 213 PLRIFQIRDGDLQESSDKLNCPLLVKPCRQYAA 115
PL F + + D++E+++ L PL+VK YA+
Sbjct: 115 PLHRFVVTEADIKEAAENLRFPLIVKHPNSYAS 147
>UniRef50_A1SJJ7 Cluster: Putative uncharacterized protein; n=1;
Nocardioides sp. JS614|Rep: Putative uncharacterized
protein - Nocardioides sp. (strain BAA-499 / JS614)
Length = 374
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 114 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEV 215
P RI G+ S++ YRT PE L R +ER G+V
Sbjct: 28 PRRIGGLASVRAFTRPYRTVPERLDR-WERRGQV 60
>UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:
F3F9.20 - Arabidopsis thaliana (Mouse-ear cress)
Length = 302
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 99 SYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
SY R P + V L + T +++RR FE+ GE+ + I D+ T +S
Sbjct: 5 SYYRSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKS 57
>UniRef50_Q1PEP5 Cluster: Nucleolin; n=2; Arabidopsis thaliana|Rep:
Nucleolin - Arabidopsis thaliana (Mouse-ear cress)
Length = 636
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 177 EDLRRVFERCGEVGDIYIPRDRYTRES 257
++LR F +CGEV +++P DR T S
Sbjct: 497 KELRSHFSKCGEVTRVHVPTDRETGAS 523
>UniRef50_Q9W108 Cluster: CG3594-PA; n=3; Sophophora|Rep: CG3594-PA
- Drosophila melanogaster (Fruit fly)
Length = 250
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 242
L V NL + TT +DL F G V I IP+ R
Sbjct: 116 LYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKR 149
>UniRef50_Q93233 Cluster: Putative uncharacterized protein pabp-2;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein pabp-2 - Caenorhabditis elegans
Length = 205
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
S+ V N+ Y T E++ + F CG V + I DR++
Sbjct: 79 SVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFS 115
>UniRef50_Q5DH48 Cluster: SJCHGC06087 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06087 protein - Schistosoma
japonicum (Blood fluke)
Length = 390
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 126 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 257
D L V L++ T DL+ F R G+V I DR+T S
Sbjct: 56 DDSRKLFVGGLSWETNESDLKEYFSRWGKVTQCIIKLDRFTGNS 99
>UniRef50_Q57WC9 Cluster: RNA-binding protein, putative; n=2;
Trypanosoma brucei|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 386
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 132 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRD 239
+V L + N+ PED++R+FER G V + + +D
Sbjct: 139 IVKLFIRNIPLDVGPEDVQRLFERFGTVESVSLHKD 174
>UniRef50_A6NDY0 Cluster: Uncharacterized protein ENSP00000367609;
n=5; Catarrhini|Rep: Uncharacterized protein
ENSP00000367609 - Homo sapiens (Human)
Length = 278
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 105 GRPPPRIDG-MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 248
G P +++ S+ V N+ Y + E+L F RCGEV + I D+++
Sbjct: 136 GTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFS 184
>UniRef50_Q8SSA1 Cluster: NUCLEOLAR PROTEIN OF THE GAR FAMILY; n=1;
Encephalitozoon cuniculi|Rep: NUCLEOLAR PROTEIN OF THE
GAR FAMILY - Encephalitozoon cuniculi
Length = 293
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 242
++ V N+ Y DL++ FE GEV + +P DR
Sbjct: 172 TIYVSNIPYECDKRDLKKYFEGMGEVVGMSLPYDR 206
>UniRef50_Q5A9A2 Cluster: Putative uncharacterized protein PRP24;
n=1; Candida albicans|Rep: Putative uncharacterized
protein PRP24 - Candida albicans (Yeast)
Length = 915
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 138 SLKVDNLTYRTTPEDLRRVFERCGEVGDI 224
++KV N+ T +R F+ CGE+GDI
Sbjct: 545 TVKVKNIAADTDEHSIRDFFKDCGEIGDI 573
>UniRef50_Q2TW86 Cluster: Predicted protein; n=2; Aspergillus|Rep:
Predicted protein - Aspergillus oryzae
Length = 937
Score = 30.3 bits (65), Expect = 8.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 168 TTPEDLRRVFERCGEVGDIYIPRDRYTRE 254
TTPE R++FE+C D+ R +Y +
Sbjct: 612 TTPEQNRKIFEKCKTADDLEFVRPKYENQ 640
>UniRef50_O13845 Cluster: RNA-binding protein rsd1; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein rsd1
- Schizosaccharomyces pombe (Fission yeast)
Length = 604
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 141 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTR 251
L V N+ + T ED++ +FE G++ +++ RD R
Sbjct: 342 LCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDDQNR 378
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 282,027,423
Number of Sequences: 1657284
Number of extensions: 4681815
Number of successful extensions: 12752
Number of sequences better than 10.0: 186
Number of HSP's better than 10.0 without gapping: 12536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12751
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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