Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B11
         (322 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   1.4  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   2.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   7.3  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    20   7.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    19   9.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    19   9.7  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    19   9.7  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 297 HLGGQRILRKQNLYFLVCN 241
           HL G  +   QNL+  +CN
Sbjct: 203 HLNGDIVKEHQNLHNKICN 221


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +3

Query: 36  CPFIACRILCIL*RSVLIIKMSYGRPPPRIDGMVSLKVDNL 158
           C  ++C+    L R         GRPP R    +SL   +L
Sbjct: 16  CKLLSCKDFDTLYRDCTTASSWPGRPPKRAPVGLSLAASHL 56


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 93  KMSYGRPPPRIDGMV 137
           ++S+GR  P  DG V
Sbjct: 432 RLSFGRAEPVFDGKV 446


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 93  KMSYGRPPPRIDGMV 137
           ++S+GR  P  DG V
Sbjct: 257 RLSFGRAEPVFDGKV 271


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 257 TFSCVTISGYVDITDLSASFKY 192
           T+S VT   Y  + DLS    Y
Sbjct: 108 TYSNVTTCSYYSLDDLSEDTFY 129


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 77  SSQNTKNSTSDERTNK 30
           S  NT  STS   +NK
Sbjct: 425 SPSNTNTSTSSTNSNK 440


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 223 ISPTSPHLSNT 191
           I P +PH SNT
Sbjct: 7   IGPPTPHESNT 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,937
Number of Sequences: 336
Number of extensions: 1201
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)