Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B10
         (417 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I3A0 Cluster: Cation-transporting ATPase; n=3; Plasmo...    32   4.1  
UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI150...    32   5.5  
UniRef50_Q25825 Cluster: ORF105 protein; n=1; Plasmodium falcipa...    32   5.5  
UniRef50_Q9R9U8 Cluster: Methyl-accepting chemotaxis protein, 53...    31   7.2  
UniRef50_A4W170 Cluster: Possible two-component sensor histidine...    31   9.6  
UniRef50_Q4XTX4 Cluster: Putative uncharacterized protein; n=4; ...    31   9.6  

>UniRef50_Q8I3A0 Cluster: Cation-transporting ATPase; n=3;
            Plasmodium|Rep: Cation-transporting ATPase - Plasmodium
            falciparum (isolate 3D7)
          Length = 2563

 Score = 32.3 bits (70), Expect = 4.1
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -2

Query: 203  FIMIYLKLNNILFKQKSLN**HKNIIN-DTYIEVQSRFAHSKAFFYFLLLILKCLVFNL 30
            F+ IY   + +L   K+L     N+IN +  I + S F+    +FY LLL+L CL+F++
Sbjct: 1526 FVYIYYGFSFVLNGYKNLK---NNMINMNVLISISSSFS----YFYSLLLLLFCLIFSI 1577


>UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI1500w;
           n=2; cellular organisms|Rep: Putative uncharacterized
           protein PFI1500w - Plasmodium falciparum (isolate 3D7)
          Length = 4530

 Score = 31.9 bits (69), Expect = 5.5
 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = +1

Query: 109 SMYVSFIIFLCY*FNDFCLNNI--LFNFRYIIMKNI 210
           S+Y  F++F  + F DF + N+  L+ F+Y I++ +
Sbjct: 8   SLYFFFVLFYLFYFEDFSIKNVINLYEFKYYIVRTL 43


>UniRef50_Q25825 Cluster: ORF105 protein; n=1; Plasmodium
           falciparum|Rep: ORF105 protein - Plasmodium falciparum
          Length = 121

 Score = 31.9 bits (69), Expect = 5.5
 Identities = 21/57 (36%), Positives = 32/57 (56%)
 Frame = -2

Query: 197 MIYLKLNNILFKQKSLN**HKNIINDTYIEVQSRFAHSKAFFYFLLLILKCLVFNLL 27
           ++Y+KL NIL K K+ N    NIIN+ Y  ++  +  S    Y LLL     ++N+L
Sbjct: 46  IVYIKLFNILLKSKNSNNYIYNIINNKYKNIKLLYILSNN-KYNLLLFKNINLWNVL 101


>UniRef50_Q9R9U8 Cluster: Methyl-accepting chemotaxis protein, 53.9
           kD; n=1; Pseudomonas putida|Rep: Methyl-accepting
           chemotaxis protein, 53.9 kD - Pseudomonas putida
          Length = 492

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 113 IEVQSRFAHSKAFFYFLLLILKCLVFNLLF*LLSKPR 3
           IE+       KA+ YFL++ + CL F ++F L+ K R
Sbjct: 147 IEIADISKRVKAYVYFLVVSINCLFFVVIFLLMKKTR 183


>UniRef50_A4W170 Cluster: Possible two-component sensor histidine
           kinase; n=2; Streptococcus suis|Rep: Possible
           two-component sensor histidine kinase - Streptococcus
           suis (strain 98HAH33)
          Length = 502

 Score = 31.1 bits (67), Expect = 9.6
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +1

Query: 94  NLLCTSMYVSFIIFLCY*FNDFCLNNILFNFRYIIMKNILYYLEFI 231
           NLL T+ Y  FI  L Y  +  C  N + N  +++  N+L  L+FI
Sbjct: 4   NLLSTAYYALFITGLIY-LSAKCFLNNIENILFLLALNVLLLLDFI 48


>UniRef50_Q4XTX4 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 1031

 Score = 31.1 bits (67), Expect = 9.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 364 RSFFLQYIFPSLLLQYISEVNFVKSFKINVSFKINY 257
           R + L YIF     +YI   N  KSF +  S+K+ Y
Sbjct: 289 RRYILNYIFNMYYEKYIGLKNLYKSFDLQESYKLKY 324


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 265,693,220
Number of Sequences: 1657284
Number of extensions: 3618363
Number of successful extensions: 12540
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12532
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)