Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B10
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.30 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.30 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.30 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.30 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   3.6  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   4.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   8.4  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = -2

Query: 110 EVQSRFAHSKAFFYFLLLILKCLVF--NLLF*LLSK 9
           +++     S+ F Y  + + KCL+F  ++LF LL K
Sbjct: 286 KIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILLVK 321


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = -2

Query: 110 EVQSRFAHSKAFFYFLLLILKCLVF--NLLF*LLSK 9
           +++     S+ F Y  + + KCL+F  ++LF LL K
Sbjct: 286 KIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILLVK 321


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = -2

Query: 110 EVQSRFAHSKAFFYFLLLILKCLVF--NLLF*LLSK 9
           +++     S+ F Y  + + KCL+F  ++LF LL K
Sbjct: 286 KIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILLVK 321


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = -2

Query: 110 EVQSRFAHSKAFFYFLLLILKCLVF--NLLF*LLSK 9
           +++     S+ F Y  + + KCL+F  ++LF LL K
Sbjct: 286 KIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILLVK 321


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 362 FFFFAIYLSFLAFTI 318
           FFFFAI   F+A  +
Sbjct: 75  FFFFAICCDFIALIV 89


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 336 GKIYCKKKERYLLFPMIFLTFI 401
           G  YC     Y +FP+  L FI
Sbjct: 179 GNPYCFNSSVYKVFPVEHLLFI 200


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 151 NDFCLNNILFNFRYIIMKNILYYLEFI 231
           N+   NN++   R+   K  LYY  +I
Sbjct: 159 NNLNKNNVVATGRFTFHKKNLYYSFYI 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,369
Number of Sequences: 336
Number of extensions: 1342
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)