Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B10
         (417 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   4.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   4.2  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   5.6  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          20   9.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 106 YKVDLHILKPFSIFCY 59
           Y V+LH   PFSI+ +
Sbjct: 466 YNVELHNSSPFSIYSF 481


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 106 YKVDLHILKPFSIFCY 59
           Y V+LH   PFSI+ +
Sbjct: 504 YNVELHNSSPFSIYSF 519


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 318 YCKSKEGKIYCKKKE 362
           Y   ++GKIY +KKE
Sbjct: 795 YSPVEDGKIYSEKKE 809


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 262 NYNDSYFTNK 233
           NYND+YF +K
Sbjct: 137 NYNDNYFYSK 146


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 283 INVSFKINYNDSYFTNKI 230
           +NV + IN ND Y  N I
Sbjct: 79  LNVLYFINKNDKYEENTI 96


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 344 ILQKKRTVFIISNDLLDIYN 403
           I QK   VF+++ D+L  +N
Sbjct: 398 ISQKHIKVFVVNKDILHEHN 417


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,607
Number of Sequences: 438
Number of extensions: 1226
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)