Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B08
(381 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 126 2e-28
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 101 3e-21
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 96 2e-19
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 88 5e-17
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 80 2e-14
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 79 2e-14
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 74 1e-12
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 66 2e-10
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 66 2e-10
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 66 2e-10
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 64 8e-10
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 62 5e-09
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 58 7e-08
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 56 2e-07
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 56 2e-07
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 54 7e-07
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 54 7e-07
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 52 3e-06
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 48 6e-05
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 47 1e-04
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 46 3e-04
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 45 4e-04
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 45 4e-04
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 42 0.005
UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1; Tetr... 41 0.007
UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putati... 41 0.009
UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26; Archa... 36 0.34
UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10; Archa... 35 0.45
UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic... 35 0.59
UniRef50_UPI000069E299 Cluster: Nuclear receptor coactivator 6 (... 34 1.0
UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1; Guill... 33 1.4
UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;... 33 1.8
UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5; Archae... 33 1.8
UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal ... 33 2.4
UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella pneu... 33 2.4
UniRef50_Q2UMK5 Cluster: Predicted protein; n=17; Pezizomycotina... 32 4.2
UniRef50_A5FRA3 Cluster: Putative uncharacterized protein; n=3; ... 31 9.6
UniRef50_Q5CTQ5 Cluster: Putative uncharacterized protein; n=2; ... 31 9.6
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 126 bits (303), Expect = 2e-28
Identities = 59/67 (88%), Positives = 66/67 (98%)
Frame = +3
Query: 63 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 242
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 243 TNIGSGV 263
TNIGSGV
Sbjct: 61 TNIGSGV 67
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 101 bits (243), Expect = 3e-21
Identities = 52/72 (72%), Positives = 57/72 (79%)
Frame = +3
Query: 48 RITFKMASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGIN 227
R T ++ A +C YSALIL DDDVAVT EKISTI A VD+EPYWPGLF KALEGIN
Sbjct: 6 RETSQVKITAIASCAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGIN 63
Query: 228 VRDLITNIGSGV 263
V+DLITNIGSGV
Sbjct: 64 VKDLITNIGSGV 75
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 95.9 bits (228), Expect = 2e-19
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = +3
Query: 63 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 242
MAS +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 243 TNIGSG 260
N+G+G
Sbjct: 61 CNVGAG 66
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 88.2 bits (209), Expect = 5e-17
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = +3
Query: 90 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 257
VYSALILVDD VAVT EKISTILKAA +VEPYW LFAKALEGINV+DLITNIGS
Sbjct: 36 VYSALILVDD-VAVTDEKISTILKAA--NVEPYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 79.8 bits (188), Expect = 2e-14
Identities = 39/64 (60%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = +3
Query: 69 SKAELACVYSALILVDDDVAVTGEKISTILKAAAVD-VEPYWPGLFAKALEGINVRDLIT 245
SK+ELACVY+AL+L DDD+ VT +KI+TILKAA + VE Y P LFA +L G NV+DL+
Sbjct: 2 SKSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLLM 61
Query: 246 NIGS 257
++GS
Sbjct: 62 SMGS 65
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 79.4 bits (187), Expect = 2e-14
Identities = 36/64 (56%), Positives = 46/64 (71%)
Frame = +3
Query: 69 SKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITN 248
S +ELAC Y+ALIL DD + +T E IS ++K A V+VE YWP LFAK E N+ DLI N
Sbjct: 2 STSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIMN 61
Query: 249 IGSG 260
+G+G
Sbjct: 62 VGAG 65
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 73.7 bits (173), Expect = 1e-12
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +3
Query: 69 SKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDLIT 245
S AELA Y+ALIL D+ + +T +K+ ++ AA V ++EP W LFAKALEG +V+DL+
Sbjct: 2 SAAELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLLL 61
Query: 246 NIGSG 260
N+GSG
Sbjct: 62 NVGSG 66
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 66.5 bits (155), Expect = 2e-10
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +3
Query: 165 AAVDVEPYWPGLFAKALEGINVRDLITNIGSGV 263
A VD+EPYWP LFAKALEGINV+DLITNIGSGV
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLITNIGSGV 38
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 66.1 bits (154), Expect = 2e-10
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +3
Query: 78 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 257
EL C Y+AL+L D V VT E I I+ AA VEPY+PGLFA+AL NV D++ G+
Sbjct: 16 ELICSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALSTTNVSDIVAGCGA 75
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 66.1 bits (154), Expect = 2e-10
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +3
Query: 63 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDL 239
M + E A Y+ALIL DD +T EK+ +L AA + DVEP W LFAKALEG +V+D+
Sbjct: 1 MPTDPERAVSYAALILADDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDI 60
Query: 240 ITNIGS 257
+T + S
Sbjct: 61 LTEVAS 66
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 64.1 bits (149), Expect = 8e-10
Identities = 29/63 (46%), Positives = 46/63 (73%)
Frame = +3
Query: 72 KAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 251
+ EL CVYS+L+L DD + VT + I ++KAA D++P+ P LFA+AL+G ++ L++ +
Sbjct: 14 REELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDLGSLLSAV 73
Query: 252 GSG 260
GSG
Sbjct: 74 GSG 76
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 61.7 bits (143), Expect = 5e-09
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +3
Query: 78 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGI 224
+ C+YSA IL +D V V +KI+T +KAA ++VEP+WPGLFAK+L +
Sbjct: 19 KFTCIYSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 57.6 bits (133), Expect = 7e-08
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +3
Query: 75 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI-TNI 251
+E AC Y+ALIL +D+ + K++ I+KAA + VEP W +F KAL+G V DL+ N
Sbjct: 17 SEAACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLLHGNS 76
Query: 252 GS 257
GS
Sbjct: 77 GS 78
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 56.0 bits (129), Expect = 2e-07
Identities = 26/63 (41%), Positives = 41/63 (65%)
Frame = +3
Query: 72 KAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 251
K EL C Y+ALIL ++ +++T E I ++K + V PY P LF KAL+G ++ L++N+
Sbjct: 14 KQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDIEGLLSNL 73
Query: 252 GSG 260
G
Sbjct: 74 SVG 76
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 56.0 bits (129), Expect = 2e-07
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = +3
Query: 78 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 257
E ACV +A+IL D++ T + +I AA V V+ W LFA LEG NV++L+T +GS
Sbjct: 5 ETACVLAAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTTLGS 64
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 54.4 bits (125), Expect = 7e-07
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +3
Query: 75 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIG 254
AELACVY+ALIL D + + + ++ ++ A+ + ++ +W L+A + NV DLI N+
Sbjct: 3 AELACVYAALILNDGEKEINADSLAKVVAASGLKLDQFWVNLYADYFKKANVADLIKNVS 62
Query: 255 SG 260
G
Sbjct: 63 LG 64
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 54.4 bits (125), Expect = 7e-07
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = +3
Query: 78 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 257
E A Y+ALIL D +V +T EK+ ++ A V+VE W LFAKALEG ++++ N +
Sbjct: 4 ESALSYAALILADAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFNFSA 63
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 52.4 bits (120), Expect = 3e-06
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +3
Query: 78 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 257
ELA +AL++ + +T E I+T+L A + VE +WP + AKAL N+ DLI + GS
Sbjct: 9 ELAVALAALLIHEAGKEITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMDAGS 68
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 48.0 bits (109), Expect = 6e-05
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = +3
Query: 72 KAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 221
K ELA +Y +IL + +T E I+ +L A+ ++V PYWP +FA+ ++G
Sbjct: 119 KQELAIMYCGMILNEVKADITEENINKLLSASKIEVAPYWPKMFAEIVKG 168
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 47.2 bits (107), Expect = 1e-04
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +3
Query: 63 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 242
M+SK +LAC Y+ALIL D + + + KAA VDV FA L+ +++ D++
Sbjct: 1 MSSKQQLACTYAALILADSG-KTDMDSLLKVTKAAGVDVSKGMASAFASILKNVDINDVL 59
Query: 243 TNIGSG 260
+ + G
Sbjct: 60 SKVSFG 65
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 45.6 bits (103), Expect = 3e-04
Identities = 18/51 (35%), Positives = 35/51 (68%)
Frame = +3
Query: 93 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 245
++A IL D + +T + + TI KAA +V+ W ++AKALEG +++++++
Sbjct: 8 FAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILS 58
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 45.2 bits (102), Expect = 4e-04
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = +3
Query: 69 SKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 242
S LAC Y+AL+L D + + E I+ +KAA V++ P P +FA+ LE +V L+
Sbjct: 2 SAETLACTYAALMLSDAGLPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLM 59
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 45.2 bits (102), Expect = 4e-04
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +3
Query: 81 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 242
LAC Y+AL+L D + + E I+ +KAA V V P P +FA+ LE +V L+
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVSVRPTMPIIFARFLEKKSVEALM 59
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 41.5 bits (93), Expect = 0.005
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 75 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIG 254
A+LAC Y+ALIL + I + KAA V+V FA AL +NV +++ +I
Sbjct: 4 AQLACTYAALILSASG-KTDADSICAVTKAAGVEVSHGMAAAFANALAAVNVNEVLGSIS 62
Query: 255 SG 260
G
Sbjct: 63 FG 64
>UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 271
Score = 41.1 bits (92), Expect = 0.007
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 63 MASKAELACVYSALILVDDDVAVTGEKISTIL-KAAAVDVEPYWPGLFAKALEGINVRDL 239
M+ + AC Y+ L+L DD A+T + I+ +L KA +VE Y P L+ + +
Sbjct: 1 MSLLSHQACTYAVLLLSDDGQAITVDNINKVLTKAKVQNVEKYLPKLYVSNITPAVIAST 60
Query: 240 ITNIGS 257
I N GS
Sbjct: 61 IANGGS 66
>UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P1, putative - Trichomonas vaginalis G3
Length = 44
Score = 40.7 bits (91), Expect = 0.009
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 78 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYW 191
ELACVY+ALIL D D +T + + I+ A+ + + +W
Sbjct: 4 ELACVYAALILHDGDKEITADALQKIIDASGLQTDKFW 41
>UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26;
Archaea|Rep: 50S ribosomal protein L12P - Archaeoglobus
fulgidus
Length = 106
Score = 35.5 bits (78), Expect = 0.34
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 90 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 242
VY+AL+L +T + + +L+AA V+V+ ALEG+N+ + I
Sbjct: 4 VYAALLLHSAGKEITEDNVKAVLEAAGVEVDEARVKALVAALEGVNIDEAI 54
>UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10;
Archaea|Rep: 50S ribosomal protein L12P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 115
Score = 35.1 bits (77), Expect = 0.45
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 90 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 242
VY+ALIL + D + + ++ +L AA VDVE ALE +++ + +
Sbjct: 4 VYAALILNEADEEINEDNLTDVLDAAGVDVEESRVKALVAALEDVDIEEAV 54
>UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4 - Mus musculus
Length = 88
Score = 34.7 bits (76), Expect = 0.59
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 63 MASKAELACVYSALILVDDD 122
MAS +ELAC+YSALIL +DD
Sbjct: 1 MASASELACIYSALILHEDD 20
>UniRef50_UPI000069E299 Cluster: Nuclear receptor coactivator 6
(Amplified in breast cancer protein 3) (Cancer-amplified
transcriptional coactivator ASC-2) (Activating signal
cointegrator 2) (ASC-2) (Peroxisome
proliferator-activated receptor-interacting protein)
(PPAR-interacting protei; n=1; Xenopus tropicalis|Rep:
Nuclear receptor coactivator 6 (Amplified in breast
cancer protein 3) (Cancer-amplified transcriptional
coactivator ASC-2) (Activating signal cointegrator 2)
(ASC-2) (Peroxisome proliferator-activated
receptor-interacting protein) (PPAR-interacting protei -
Xenopus tropicalis
Length = 1685
Score = 33.9 bits (74), Expect = 1.0
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -3
Query: 223 MPSKAFANRPGQYGSTSTAAAFSMVEIF---SPVTATSSSTRIRAE*TQANSAFDAILNV 53
+PS A RP S S++ + S + +F +P+T +S++T Q S ++NV
Sbjct: 1434 LPSSAM-KRPAGQTSVSSSVSQSQITVFVTSNPITTSSTTTGPMTSHVQQQSLMPTVVNV 1492
Query: 52 IRASRQKALAQGEQA 8
+ +++G+QA
Sbjct: 1493 QNMGNKVIVSEGQQA 1507
>UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1;
Guillardia theta|Rep: Acidic ribosomal protein P1 -
Guillardia theta (Cryptomonas phi)
Length = 104
Score = 33.5 bits (73), Expect = 1.4
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +3
Query: 81 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRD 236
++C+ S LIL ++ + +T + IS +LK + +VE Y+ F + ++ ++
Sbjct: 10 ISCILSILILKENKIKITKDLISLVLKTSNNNVEDYFLSYFERISASLDEKE 61
>UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;
n=16; Burkholderiaceae|Rep: Transcriptional regulator,
AraC family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 352
Score = 33.1 bits (72), Expect = 1.8
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +3
Query: 105 ILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 251
+L + VT E+ ST+ + A+D++ PG+F++ L G ++ L ++
Sbjct: 58 LLGEPHARVTEEQFSTLYRTLAIDLDDEMPGIFSRPLRGGTLKYLCLSL 106
>UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5;
Archaea|Rep: 50S ribosomal protein L12P - Pyrococcus
horikoshii
Length = 108
Score = 33.1 bits (72), Expect = 1.8
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 90 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 242
VY+AL+L + E + +L+AA V+ E ALEG+N+ ++I
Sbjct: 4 VYAALLLHSVGKEINEENLKAVLQAAGVEPEEARIKALVAALEGVNIDEVI 54
>UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal
protein P1; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein P1 - Equus caballus
Length = 125
Score = 32.7 bits (71), Expect = 2.4
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 81 LACVYSALILVDDDVAVT 134
LAC+YSALIL DD+V VT
Sbjct: 43 LACIYSALILHDDEVTVT 60
>UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella
pneumophila|Rep: Expressed protein - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 509
Score = 32.7 bits (71), Expect = 2.4
Identities = 12/50 (24%), Positives = 29/50 (58%)
Frame = +3
Query: 42 LARITFKMASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYW 191
+ + T + S +L Y +L + ++TG+++ + ++A +++EPYW
Sbjct: 377 IVKCTGYLNSSPKLEFCYKTQLLKLETCSITGKELQSAVQATLINLEPYW 426
>UniRef50_Q2UMK5 Cluster: Predicted protein; n=17;
Pezizomycotina|Rep: Predicted protein - Aspergillus
oryzae
Length = 827
Score = 31.9 bits (69), Expect = 4.2
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -3
Query: 226 LMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTRIRAE*TQANSAFDAILNVIR 47
L+P+ FA G G + + AF++ EIF + + A ++ ++ D L++ R
Sbjct: 281 LLPADIFALFIGHLGPSMRSLAFTLKEIFKEIPFRPAPDYKVAINSRFRTSLDRALDLYR 340
Query: 46 ASRQKAL 26
SR++AL
Sbjct: 341 GSREEAL 347
>UniRef50_A5FRA3 Cluster: Putative uncharacterized protein; n=3;
Dehalococcoides|Rep: Putative uncharacterized protein -
Dehalococcoides sp. BAV1
Length = 468
Score = 30.7 bits (66), Expect = 9.6
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = -3
Query: 241 IKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTRIRAE*TQANSAFDAI 62
+ SR +K+ A R G+ +TA A + + TA +++ R AE ++ + +
Sbjct: 353 LASRAESTAKSAAERAT--GAEATAKAAAERATGAETTARAAADRAVAEVSRVRQTAEEV 410
Query: 61 LNVIRASRQKALAQGEQALV 2
R + ++ALA+ E+ALV
Sbjct: 411 AQSARRAAEEALAKAEEALV 430
>UniRef50_Q5CTQ5 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 268
Score = 30.7 bits (66), Expect = 9.6
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -3
Query: 256 DPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTRIRAE 95
D +L + + +K + N QYG T + ++ F+P ++SS +IR E
Sbjct: 182 DTILTLSKNNSISNKEYQNI--QYGETISETLLELINAFNPKLSSSSKDKIREE 233
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,810,607
Number of Sequences: 1657284
Number of extensions: 4797053
Number of successful extensions: 11305
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 10926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11293
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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