Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B08
         (381 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       23   5.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   8.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   8.7  

>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 80 FSF*CHFKCYTCKSP 36
          F F   +KCY+C+ P
Sbjct: 6  FCFYFRYKCYSCEPP 20


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 4    RGLVLPELRPFGDLHV*HLKWHQKLN 81
            R L L   + +  LH+ HL W  +++
Sbjct: 929  RSLFLDGFKMYARLHLLHLNWKHEVH 954


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 4    RGLVLPELRPFGDLHV*HLKWHQKLN 81
            R L L   + +  LH+ HL W  +++
Sbjct: 930  RSLFLDGFKMYARLHLLHLNWKHEVH 955


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,043
Number of Sequences: 2352
Number of extensions: 4789
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29074284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)