Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B07
         (451 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   4.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   4.0  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   5.4  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   7.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.1  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 329 AIFSRTCSANVLWPTSLARSAAKRRDSGF*DLPSIIEA 216
           A+++R      L+  +L+ +   R+D+   DLPS IE+
Sbjct: 111 AVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIES 148


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 286 VGHNTFAEHVLEKIAQIKLEQAENSDD 366
           +GH     H  EKI + + E  ++ DD
Sbjct: 266 LGHTLSMNHKYEKIDKEEHESMDDDDD 292


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +1

Query: 31  VKGAVKTLAEARLFKEAYILCRIRYMDSIAEEMLGTWASECDTIGN 168
           ++ ++ T+   +L K   +    RY+D +   +    A + D IGN
Sbjct: 119 LRKSIPTMPSDKLSKIQTLKLAARYIDFLYHVLSNENALDVDLIGN 164


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +1

Query: 376 KLTSRADAIATTGEEYQIEDDYN 444
           +L ++ D      ++Y+I+DDY+
Sbjct: 113 QLVAKYDPDGIYRKQYEIDDDYD 135


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 95  ELGTWIA*LKRC 130
           E+GTWI  +++C
Sbjct: 133 EVGTWIRAVRKC 144


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 95  ELGTWIA*LKRC 130
           E+GTWI  +++C
Sbjct: 133 EVGTWIRAVRKC 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.130    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,983
Number of Sequences: 336
Number of extensions: 1967
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)