Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B07
(451 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical ... 31 0.51
Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical p... 30 0.68
Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical pr... 30 0.68
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr... 30 0.68
Z83236-4|CAB05781.1| 191|Caenorhabditis elegans Hypothetical pr... 30 0.89
AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical ... 30 0.89
Z71264-3|CAA95827.1| 325|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z75955-13|CAB00113.2| 424|Caenorhabditis elegans Hypothetical p... 29 1.6
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 1.6
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 1.6
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 1.6
Z81576-2|CAB04644.1| 522|Caenorhabditis elegans Hypothetical pr... 29 2.1
U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical pr... 27 4.8
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 27 4.8
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 27 4.8
AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 prote... 27 4.8
AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal prote... 27 4.8
AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protei... 27 4.8
>AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical
protein C48E7.8 protein.
Length = 820
Score = 30.7 bits (66), Expect = 0.51
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -3
Query: 368 LSSLFSACSSLIWAIFSRTCSANVLWPTSLARSAAKRRDS 249
L +LF CSS W IFS TC ++ + T RS A++ +S
Sbjct: 332 LVNLFRVCSSF-WVIFSHTCLFSLHF-TDTIRSVARKGES 369
>Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical
protein F36H1.2c protein.
Length = 1427
Score = 30.3 bits (65), Expect = 0.68
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Frame = +1
Query: 103 YMDSIAEEML--GTWASECDTIGNFVVSAACYIAQGNISSASIILGK-----SQNPESLR 261
Y D I E ++ G + ++CD GN+++++A + GN + +IL K Q+ E R
Sbjct: 238 YAD-ICESLINSGAFVNQCDRFGNWILTSA--VRSGNAAIVRMILDKFADINCQDSEK-R 293
Query: 262 LAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDKLPKL 381
LA N A +LEK ++L +N D + P L
Sbjct: 294 TPLHLAIDKSFNDIAYILLEKKPNLEL---KNKDGETPLL 330
>Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical
protein F36H1.2b protein.
Length = 1379
Score = 30.3 bits (65), Expect = 0.68
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Frame = +1
Query: 103 YMDSIAEEML--GTWASECDTIGNFVVSAACYIAQGNISSASIILGK-----SQNPESLR 261
Y D I E ++ G + ++CD GN+++++A + GN + +IL K Q+ E R
Sbjct: 238 YAD-ICESLINSGAFVNQCDRFGNWILTSA--VRSGNAAIVRMILDKFADINCQDSEK-R 293
Query: 262 LAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDKLPKL 381
LA N A +LEK ++L +N D + P L
Sbjct: 294 TPLHLAIDKSFNDIAYILLEKKPNLEL---KNKDGETPLL 330
>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical
protein F36H1.2a protein.
Length = 1398
Score = 30.3 bits (65), Expect = 0.68
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Frame = +1
Query: 103 YMDSIAEEML--GTWASECDTIGNFVVSAACYIAQGNISSASIILGK-----SQNPESLR 261
Y D I E ++ G + ++CD GN+++++A + GN + +IL K Q+ E R
Sbjct: 238 YAD-ICESLINSGAFVNQCDRFGNWILTSA--VRSGNAAIVRMILDKFADINCQDSEK-R 293
Query: 262 LAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDKLPKL 381
LA N A +LEK ++L +N D + P L
Sbjct: 294 TPLHLAIDKSFNDIAYILLEKKPNLEL---KNKDGETPLL 330
>Z83236-4|CAB05781.1| 191|Caenorhabditis elegans Hypothetical
protein K10H10.5 protein.
Length = 191
Score = 29.9 bits (64), Expect = 0.89
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 319 EKIAQIKLEQAENSDDKLPKLTSRADAIATTGEEYQIEDDYNDD 450
EK+A K + E DD+ P L ++ +A + + E+D+ DD
Sbjct: 87 EKVAHHKKKPIEEDDDEFP-LPPNSEEVAEASKSSKKEEDWEDD 129
>AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical
protein C03H5.3 protein.
Length = 287
Score = 29.9 bits (64), Expect = 0.89
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +1
Query: 235 KSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDKLPKLTSRADAIATTG 414
K + P SLR + LAK G N+ AE + E+ +I ENS D + T + +
Sbjct: 46 KEKLPISLRKSERLAKNSGENSSAE-IAEEHKEIVAPSQENSVDDDAESTQLSVDVFADP 104
Query: 415 EEYQIEDD 438
+++ +DD
Sbjct: 105 SDFEDDDD 112
>Z71264-3|CAA95827.1| 325|Caenorhabditis elegans Hypothetical
protein K07G5.4 protein.
Length = 325
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 313 VLEKIAQIKLEQAENSDDKLPKLTSRADAIATTGEEYQIEDDYNDD 450
++ K+ IK E+S ++LP+ D +AT E DD +DD
Sbjct: 120 MMPKLTSIKHLMTESSSEELPQHDEMEDDVATLEEVSMEYDDEDDD 165
>Z75955-13|CAB00113.2| 424|Caenorhabditis elegans Hypothetical
protein R07B7.4 protein.
Length = 424
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 369 FIIAILSLFKFNLGYFLENVLCECIVAD*FSQVC 268
FII+++SLF + LGY N+ C+ S VC
Sbjct: 386 FIISVISLFWYLLGYCRGNLQAYCLQCAVVSGVC 419
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 199 QGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDK 369
Q +I+ +IIL ++ +++ AD A+ + NTFA V + + +LE S ++
Sbjct: 748 QSDIARVAIILTDGRSQDNVTGPADSARKLSINTFAIGVTDHVLASELESIAGSPNR 804
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 199 QGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDK 369
Q +I+ +IIL ++ +++ AD A+ + NTFA V + + +LE S ++
Sbjct: 1332 QSDIARVAIILTDGRSQDNVTGPADSARKLSINTFAIGVTDHVLASELESIAGSPNR 1388
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 199 QGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDK 369
Q +I+ +IIL ++ +++ AD A+ + NTFA V + + +LE S ++
Sbjct: 748 QSDIARVAIILTDGRSQDNVTGPADSARKLSINTFAIGVTDHVLASELESIAGSPNR 804
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 199 QGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDK 369
Q +I+ +IIL ++ +++ AD A+ + NTFA V + + +LE S ++
Sbjct: 1332 QSDIARVAIILTDGRSQDNVTGPADSARKLSINTFAIGVTDHVLASELESIAGSPNR 1388
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 199 QGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDK 369
Q +I+ +IIL ++ +++ AD A+ + NTFA V + + +LE S ++
Sbjct: 1332 QSDIARVAIILTDGRSQDNVTGPADSARKLSINTFAIGVTDHVLASELESIAGSPNR 1388
>Z81576-2|CAB04644.1| 522|Caenorhabditis elegans Hypothetical
protein R10E8.3 protein.
Length = 522
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 208 ISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKI 327
+SSA ++ + +P S+ DL KL GH EH+LE +
Sbjct: 206 VSSAQML--QETHPSSIP-TFDLVKLTGHQPVIEHILESL 242
>U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical
protein T05A12.4b protein.
Length = 975
Score = 27.5 bits (58), Expect = 4.8
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 301 FAEHVLEKIAQIKLEQAENSDDKLPKLTSRADAI-ATTGEEYQIEDD 438
F +L K+ K +Q ++ KLPKLT I TT EE Q +D+
Sbjct: 613 FLLEILSKMMSRKTKQDKSVQLKLPKLTEVEKIIYFTTVEERQYKDE 659
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical
protein T05A12.4a protein.
Length = 1622
Score = 27.5 bits (58), Expect = 4.8
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 301 FAEHVLEKIAQIKLEQAENSDDKLPKLTSRADAI-ATTGEEYQIEDD 438
F +L K+ K +Q ++ KLPKLT I TT EE Q +D+
Sbjct: 613 FLLEILSKMMSRKTKQDKSVQLKLPKLTEVEKIIYFTTVEERQYKDE 659
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 129 VRHLGIRMRHD-WKFCCICCLLHSPRE 206
+R I ++ D WKF C+C LL + RE
Sbjct: 201 IRQFYINVQKDEWKFNCLCDLLKTSRE 227
>AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 protein
protein.
Length = 679
Score = 27.5 bits (58), Expect = 4.8
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +1
Query: 154 DTIGNFVVSAACYIAQGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQ 333
DTIGN + Q ++ + +GK +N L +A++ KL H F VL K+
Sbjct: 329 DTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASN--KL-PHLPFTVKVLYKLQA 385
Query: 334 IKLEQAENSDDKLPKLTSRAD 396
+ L +EN + KL+ D
Sbjct: 386 LWL--SENQTQSILKLSETRD 404
>AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal protein
413, isoform a protein.
Length = 679
Score = 27.5 bits (58), Expect = 4.8
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +1
Query: 154 DTIGNFVVSAACYIAQGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQ 333
DTIGN + Q ++ + +GK +N L +A++ KL H F VL K+
Sbjct: 329 DTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASN--KL-PHLPFTVKVLYKLQA 385
Query: 334 IKLEQAENSDDKLPKLTSRAD 396
+ L +EN + KL+ D
Sbjct: 386 LWL--SENQTQSILKLSETRD 404
>AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protein
413, isoform b protein.
Length = 699
Score = 27.5 bits (58), Expect = 4.8
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +1
Query: 154 DTIGNFVVSAACYIAQGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQ 333
DTIGN + Q ++ + +GK +N L +A++ KL H F VL K+
Sbjct: 329 DTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASN--KL-PHLPFTVKVLYKLQA 385
Query: 334 IKLEQAENSDDKLPKLTSRAD 396
+ L +EN + KL+ D
Sbjct: 386 LWL--SENQTQSILKLSETRD 404
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.130 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,955,282
Number of Sequences: 27780
Number of extensions: 191388
Number of successful extensions: 578
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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