BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_B06 (544 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g32235.1 68415.m03939 expressed protein 29 2.7 At3g63260.2 68416.m07109 protein kinase, putative (MRK1) identic... 28 4.6 At3g63260.1 68416.m07108 protein kinase, putative (MRK1) identic... 28 4.6 At5g38690.1 68418.m04678 expressed protein 27 6.1 At5g21120.1 68418.m02518 ethylene-insensitive3-like2 (EIL2) iden... 27 6.1 At2g12875.1 68415.m01402 hypothetical protein 27 6.1 At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 27 8.1 At3g27900.1 68416.m03481 hypothetical protein 27 8.1 >At2g32235.1 68415.m03939 expressed protein Length = 310 Score = 28.7 bits (61), Expect = 2.7 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +3 Query: 345 SLKNGVATKILETGTDASATNDDTTEVYFSAKDGIYVFDAKTNKTEKYGTNTDSLIGIVK 524 SL + + G A+ + D ++ + KDG+ D NK KYG S G VK Sbjct: 193 SLLGSSRSNAIPEGDLANPESSDANKMLYIIKDGVRELDQWCNKLLKYGEAVSS--GSVK 250 Query: 525 TNGS 536 + S Sbjct: 251 QDDS 254 >At3g63260.2 68416.m07109 protein kinase, putative (MRK1) identical to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079 Length = 344 Score = 27.9 bits (59), Expect = 4.6 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +3 Query: 330 YKGLYSLKNGVATKILETGTDASATNDDTTEVYFSAKDGIYVF 458 Y+G+Y+ + VA K+L+ G D AT +TT + S + + V+ Sbjct: 98 YRGVYAGQE-VAVKVLDWGEDGYATPAETTALRASFEQEVAVW 139 >At3g63260.1 68416.m07108 protein kinase, putative (MRK1) identical to ATMRK1 [Arabidopsis thaliana] gi|2351097|dbj|BAA22079 Length = 391 Score = 27.9 bits (59), Expect = 4.6 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +3 Query: 330 YKGLYSLKNGVATKILETGTDASATNDDTTEVYFSAKDGIYVF 458 Y+G+Y+ + VA K+L+ G D AT +TT + S + + V+ Sbjct: 98 YRGVYAGQE-VAVKVLDWGEDGYATPAETTALRASFEQEVAVW 139 >At5g38690.1 68418.m04678 expressed protein Length = 572 Score = 27.5 bits (58), Expect = 6.1 Identities = 16/62 (25%), Positives = 26/62 (41%) Frame = +3 Query: 297 EADVNDKGEKEYKGLYSLKNGVATKILETGTDASATNDDTTEVYFSAKDGIYVFDAKTNK 476 E + K + E KNG+ I E S N +T EVY ++ I + K+ Sbjct: 431 EKQLKQKLQDELAQAVKAKNGIPLLITEHDAIVSRINAETQEVYSEMQNAIDMLSKKSQG 490 Query: 477 TE 482 ++ Sbjct: 491 SD 492 >At5g21120.1 68418.m02518 ethylene-insensitive3-like2 (EIL2) identical to ethylene-insensitive3-like2 (EIL2) GI:2224929 from [Arabidopsis thaliana] Length = 518 Score = 27.5 bits (58), Expect = 6.1 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = +3 Query: 351 KNGVATKILETGTDASATNDDTTEVYFSAKDGIYVFDAKTNKTEKYGTNTDSLIGIVKTN 530 KNG+ T++L + + A+DGI + +KT E+Y + GIV N Sbjct: 69 KNGLGTRLLLKQQHDDFPEHSSKRTMYKAQDGILKYMSKT--MERYKAQ-GFVYGIVLEN 125 Query: 531 GSDV 542 G V Sbjct: 126 GKTV 129 >At2g12875.1 68415.m01402 hypothetical protein Length = 325 Score = 27.5 bits (58), Expect = 6.1 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +3 Query: 351 KNGVATKILETGTDASATNDDTTE 422 K GVATK+++ GT A+ +TE Sbjct: 79 KRGVATKLIDKGTKATTEEPSSTE 102 >At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); U3 snoRNP-associated 55-kDa protein, Homo sapiens, gb:NP_004695; Vegetatible incompatibility protein HET-E-1 (SP:Q00808) [Podospora anserina] Length = 504 Score = 27.1 bits (57), Expect = 8.1 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +3 Query: 399 ATNDDTTEVYFSAKDG-IYVFDAKTNKTEKYGTNTDSLI 512 A +DD + + ++KDG I +D + KT+KY +D ++ Sbjct: 168 ALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEIL 206 >At3g27900.1 68416.m03481 hypothetical protein Length = 244 Score = 27.1 bits (57), Expect = 8.1 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = +3 Query: 420 EVYFSAKDGIYVFDAKTNKTEKYGTNTDSLI 512 E Y K+G+Y+ D K+N+ E + + S + Sbjct: 103 ETYIKPKNGVYLADVKSNQWEVFVKSCKSFV 133 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,131,351 Number of Sequences: 28952 Number of extensions: 176152 Number of successful extensions: 473 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 468 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 473 length of database: 12,070,560 effective HSP length: 77 effective length of database: 9,841,256 effective search space used: 1013649368 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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