Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B05
(202 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 0.71
EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive pep... 20 2.9
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 19 3.8
AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 19 3.8
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 19 5.0
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 19 5.0
AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein. 19 5.0
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 19 5.0
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 19 6.6
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 19 6.6
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 19 6.6
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 18 8.8
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 18 8.8
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.8 bits (44), Expect = 0.71
Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 92 IYCKLIYISNTLHKYLILDVNSFTRR--AHCLXGR 190
++C L+ ++ +K +LD + TR A C+ G+
Sbjct: 6 LFCVLVTLATARNKAPLLDDGTRTRNKAAECVFGK 40
Score = 18.6 bits (36), Expect = 6.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 43 LRPRRSGSTNHMVYC 87
LRP G+T +V C
Sbjct: 906 LRPASGGTTARVVRC 920
>EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive
peptide receptor 2 protein.
Length = 354
Score = 19.8 bits (39), Expect = 2.9
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 2 HEEHETPRGRCSG 40
HEEH+T R G
Sbjct: 263 HEEHDTRRASSRG 275
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 19.4 bits (38), Expect = 3.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 63 FNEPYGILLL 92
FNE +GI+LL
Sbjct: 519 FNETFGIVLL 528
>AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor
candidate 24 protein.
Length = 384
Score = 19.4 bits (38), Expect = 3.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 63 FNEPYGILLL 92
FNE +GI+LL
Sbjct: 244 FNETFGIVLL 253
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 19.0 bits (37), Expect = 5.0
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -2
Query: 81 YHMVR*TGAPRAEHPLQRP 25
YH G P A PLQ P
Sbjct: 176 YHPYPNFGVPPAGIPLQNP 194
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 19.0 bits (37), Expect = 5.0
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 42 HPLQRPRGVSCS 7
+P+QRP+ S S
Sbjct: 268 YPMQRPKSASLS 279
>AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein.
Length = 150
Score = 19.0 bits (37), Expect = 5.0
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 51 RAEHPLQRPRG 19
R +HPL+ P G
Sbjct: 2 RVKHPLRMPTG 12
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 19.0 bits (37), Expect = 5.0
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 51 RAEHPLQRPRG 19
R +HPL+ P G
Sbjct: 2 RVKHPLRMPTG 12
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 18.6 bits (36), Expect = 6.6
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -3
Query: 149 HPISGICVMYYL 114
HP C MYY+
Sbjct: 925 HPDKADCRMYYM 936
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 18.6 bits (36), Expect = 6.6
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 41 CSALGAPVQRTIW 79
CSA G P IW
Sbjct: 45 CSAHGNPTPDIIW 57
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 18.6 bits (36), Expect = 6.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 71 FVEPERRGRST 39
F+E ERRG+ T
Sbjct: 211 FLEGERRGKFT 221
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 18.2 bits (35), Expect = 8.8
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 71 TIWYIVVIYCKLIYISNTLHK 133
T+++ + KLI + + LHK
Sbjct: 93 TVFFCLFYQNKLIEVISKLHK 113
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 18.2 bits (35), Expect = 8.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 63 FNEPYGILLL 92
FNE YG+ LL
Sbjct: 1318 FNEIYGVPLL 1327
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,335
Number of Sequences: 336
Number of extensions: 707
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used: 2371622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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