Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B05
         (202 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL391240-1|CAM28242.1| 2106|Homo sapiens novel protein protein.        29   2.1  
AL031433-2|CAI19661.2| 2106|Homo sapiens novel protein protein.        29   2.1  
AL031003-5|CAM28244.1| 2106|Homo sapiens novel protein protein.        29   2.1  
U10691-1|AAA68875.1|  314|Homo sapiens MAGE-6 antigen protein.         29   2.8  
U10339-1|AAA19006.1|  314|Homo sapiens MAGE-3b protein.                29   2.8  
D32076-1|BAA06842.1|  314|Homo sapiens MAGE-6 protein protein.         29   2.8  
CR541768-1|CAG46567.1|  314|Homo sapiens MAGEA6 protein.               29   2.8  
BC067731-1|AAH67731.1|  314|Homo sapiens melanoma antigen family...    29   2.8  
BC041599-1|AAH41599.1|  314|Homo sapiens melanoma antigen family...    29   2.8  

>AL391240-1|CAM28242.1| 2106|Homo sapiens novel protein protein.
          Length = 2106

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
 Frame = +2

Query: 26  GRCSGCS----ALGAPVQRTIWYIVVIYCKLI 109
           GR SGCS    AL  PV RTI+YI     +L+
Sbjct: 231 GRGSGCSCTAPALSGPVARTIYYIAAELVRLV 262


>AL031433-2|CAI19661.2| 2106|Homo sapiens novel protein protein.
          Length = 2106

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
 Frame = +2

Query: 26  GRCSGCS----ALGAPVQRTIWYIVVIYCKLI 109
           GR SGCS    AL  PV RTI+YI     +L+
Sbjct: 231 GRGSGCSCTAPALSGPVARTIYYIAAELVRLV 262


>AL031003-5|CAM28244.1| 2106|Homo sapiens novel protein protein.
          Length = 2106

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
 Frame = +2

Query: 26  GRCSGCS----ALGAPVQRTIWYIVVIYCKLI 109
           GR SGCS    AL  PV RTI+YI     +L+
Sbjct: 231 GRGSGCSCTAPALSGPVARTIYYIAAELVRLV 262


>U10691-1|AAA68875.1|  314|Homo sapiens MAGE-6 antigen protein.
          Length = 314

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 108 INLQYITTIYHMVR*TGAPRAEHPL 34
           I   Y+  ++HMV+ +G PR  +PL
Sbjct: 279 IETSYVKVLHHMVKISGGPRISYPL 303


>U10339-1|AAA19006.1|  314|Homo sapiens MAGE-3b protein.
          Length = 314

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 108 INLQYITTIYHMVR*TGAPRAEHPL 34
           I   Y+  ++HMV+ +G PR  +PL
Sbjct: 279 IETSYVKVLHHMVKISGGPRISYPL 303


>D32076-1|BAA06842.1|  314|Homo sapiens MAGE-6 protein protein.
          Length = 314

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 108 INLQYITTIYHMVR*TGAPRAEHPL 34
           I   Y+  ++HMV+ +G PR  +PL
Sbjct: 279 IETSYVKVLHHMVKISGGPRISYPL 303


>CR541768-1|CAG46567.1|  314|Homo sapiens MAGEA6 protein.
          Length = 314

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 108 INLQYITTIYHMVR*TGAPRAEHPL 34
           I   Y+  ++HMV+ +G PR  +PL
Sbjct: 279 IETSYVKVLHHMVKISGGPRISYPL 303


>BC067731-1|AAH67731.1|  314|Homo sapiens melanoma antigen family A,
           6 protein.
          Length = 314

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 108 INLQYITTIYHMVR*TGAPRAEHPL 34
           I   Y+  ++HMV+ +G PR  +PL
Sbjct: 279 IETSYVKVLHHMVKISGGPRISYPL 303


>BC041599-1|AAH41599.1|  314|Homo sapiens melanoma antigen family A,
           6 protein.
          Length = 314

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 108 INLQYITTIYHMVR*TGAPRAEHPL 34
           I   Y+  ++HMV+ +G PR  +PL
Sbjct: 279 IETSYVKVLHHMVKISGGPRISYPL 303


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,600,197
Number of Sequences: 237096
Number of extensions: 522488
Number of successful extensions: 812
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 76,859,062
effective HSP length: 45
effective length of database: 66,189,742
effective search space used: 1389984582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)