BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_B05
(202 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089264-1|AAL90002.1| 580|Drosophila melanogaster AT05239p pro... 30 0.51
AE014298-2321|AAF48559.2| 580|Drosophila melanogaster CG12698-P... 30 0.51
>AY089264-1|AAL90002.1| 580|Drosophila melanogaster AT05239p
protein.
Length = 580
Score = 29.9 bits (64), Expect = 0.51
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 26 GRCSGCSALGAPVQRTIWYIVVIYCKLIYISNTLHKYLIL 145
G C G + RT YI YC+L+ I NT +K ++L
Sbjct: 166 GDCIGDIDVMEDTPRTNTYIATTYCELLAIFNTNYKIVLL 205
>AE014298-2321|AAF48559.2| 580|Drosophila melanogaster CG12698-PA
protein.
Length = 580
Score = 29.9 bits (64), Expect = 0.51
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 26 GRCSGCSALGAPVQRTIWYIVVIYCKLIYISNTLHKYLIL 145
G C G + RT YI YC+L+ I NT +K ++L
Sbjct: 166 GDCIGDIDVMEDTPRTNTYIATTYCELLAIFNTNYKIVLL 205
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,053,944
Number of Sequences: 53049
Number of extensions: 139438
Number of successful extensions: 308
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 308
length of database: 24,988,368
effective HSP length: 46
effective length of database: 22,548,114
effective search space used: 450962280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -