Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B04
         (572 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   2.4  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   5.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   5.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.5  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.9  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   9.9  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 538 STHSIPRPSTPDSNNT 491
           ST SIP PST D  +T
Sbjct: 128 STSSIPSPSTTDDLST 143


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 78 WLQGRSILRHTAFLCFEGCDD 16
          WL   S   H A L  EGC++
Sbjct: 37 WLAAASGAPHPAALPIEGCNE 57


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
          ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 78 WLQGRSILRHTAFLCFEGCDD 16
          WL   S   H A L  EGC++
Sbjct: 37 WLAAASGAPHPAALPIEGCNE 57


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 559 ALLEDEVSTHSIPRPSTPDSNNTET 485
           AL  DE+    +P P    +  TE+
Sbjct: 385 ALKSDEIPPEPVPTPEPQPTQTTES 409


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 556 LLEDEVSTHSIPRPSTPDS 500
           +L+   ST S P P +P+S
Sbjct: 281 VLQSPSSTSSSPEPRSPES 299


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -1

Query: 320 GITNDEGTEYRSNTRSGSSYSNCRCASTNEFGSR 219
           G  + +G E ++N       S  +C+   + GSR
Sbjct: 52  GKCSPDGQELKNNLADALQTSCSKCSQRQQDGSR 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,077
Number of Sequences: 336
Number of extensions: 2653
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)