Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_B02
         (318 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   0.33 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   0.33 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   1.4  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    20   5.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +3

Query: 36  KRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM 158
           K+P++A+ML++   R ++ +E    +   I +  G  W ++
Sbjct: 480 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 520


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +3

Query: 36  KRPMSAYMLWLNSAREQIKSEHPGLKVTEIAKKGGEMWKSM 158
           K+P++A+ML++   R ++ +E    +   I +  G  W ++
Sbjct: 372 KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHAL 412


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 217 SLAYCSLALAAFSSQILLSFIDFHISPPFLAISVTFS 107
           +L YCSLA+      ++       I+ P L I V+ S
Sbjct: 412 ALVYCSLAIFVLCELLIEGTTSILINVPSLIIHVSTS 448


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 189 LLSLPKYFYLSLISTFHLLFWL 124
           LL +  ++Y  +I T HLLF L
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLL 131



 Score = 20.6 bits (41), Expect = 4.1
 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -1

Query: 171 YFYLS-LISTFHLLFWL 124
           YFY + +I T HLLF L
Sbjct: 148 YFYCAFIIFTVHLLFLL 164



 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 192 WLLSLPKYFYLSLISTFHLLF 130
           +LL +  +F   +I T HLLF
Sbjct: 162 FLLCIYHFFCAFIIFTMHLLF 182


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 3   MRKKNKMTDKPK 38
           ++K+NKMT +PK
Sbjct: 142 LKKENKMTWEPK 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,189
Number of Sequences: 336
Number of extensions: 1168
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)