Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A24
         (409 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    29   0.023
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      24   0.66 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.7  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   2.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   4.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   4.6  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   6.1  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   6.1  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   6.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   6.1  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   6.1  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   6.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   8.1  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    20   8.1  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    20   8.1  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 0.023
 Identities = 16/60 (26%), Positives = 31/60 (51%)
 Frame = +2

Query: 131 QPT*PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHPSVVS 310
           +P  PA  P+   K   V+ + +R       ++MP ++ W  P    + P+ NS+P++V+
Sbjct: 39  RPLIPATAPQKPDKWEDVMADIER-------VIMPGVTHWHSPRFHAYFPTANSYPAIVA 91


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 342 RCNKGCELQGSRWWQSHQSC 401
           RC    ++ GS+ WQ  +SC
Sbjct: 68  RCASYIQVSGSKIWQMERSC 87


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 286  PGRTPHTGAWREP 248
            PG  P T +W++P
Sbjct: 1157 PGHKPSTSSWQKP 1169


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/41 (19%), Positives = 21/41 (51%)
 Frame = -2

Query: 351 YYTDGDRLPHVTHGETTEGWEFLEGLHTQGLGGNQVDNGGI 229
           ++ D  ++PH+  G    G++  + +  +    N+ + GG+
Sbjct: 313 FWDDEQQVPHIVKGNQWLGFDDPKSIQVKVEFANEKNLGGV 353


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 184 TGKSTEDNPKSIKSGDAAIVNLVPSKPLC 270
           TGK  +    S K  DAA+  +VP K LC
Sbjct: 130 TGKVCDVEMVSCK--DAALRKVVPLKKLC 156


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = +2

Query: 254 PPSPCV--WSPSRNSHPSVVSP 313
           PP P +    P  +SHP++V+P
Sbjct: 231 PPHPGLSPHPPHLSSHPAIVTP 252


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = +2

Query: 254 PPSPCV--WSPSRNSHPSVVSP 313
           PP P +    P  +SHP++V+P
Sbjct: 123 PPHPGLSPHPPHLSSHPAIVTP 144


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 321 VTHGETTEGWEFLEGLHTQG 262
           VT G   EG+   E LH +G
Sbjct: 36  VTEGWDEEGYHTPESLHYEG 55


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/41 (19%), Positives = 20/41 (48%)
 Frame = -2

Query: 351 YYTDGDRLPHVTHGETTEGWEFLEGLHTQGLGGNQVDNGGI 229
           ++ D  ++PH+  G    G++  + +  +    N  + GG+
Sbjct: 314 FWDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSKNLGGV 354


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/41 (19%), Positives = 20/41 (48%)
 Frame = -2

Query: 351 YYTDGDRLPHVTHGETTEGWEFLEGLHTQGLGGNQVDNGGI 229
           ++ D  ++PH+  G    G++  + +  +    N  + GG+
Sbjct: 314 FWDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSKNLGGV 354


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 56  KSAAPLGGLFFESP 15
           K+ +P GG  FE+P
Sbjct: 396 KAPSPYGGQMFEAP 409


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 11  LQEIRKTTHPGE 46
           L+E  +TTHP E
Sbjct: 346 LEEYTRTTHPNE 357


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 280 FQEFPPLGRFAVRDMR 327
           +  FPP  R  +RD R
Sbjct: 81  YPRFPPYDRMDIRDRR 96


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +1

Query: 205 NPKSIKSGDAAIVNLVPSK 261
           NP  + SG    + ++P+K
Sbjct: 59  NPSRLDSGKELYIKIIPNK 77


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 290 NSWKDSTHRGLEGTRLTMAASPDL 219
           +SW +    GLE      + +PDL
Sbjct: 73  DSWNEIDLHGLENVANLKSVNPDL 96


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 234 RHCQPGSLQAP 266
           +H  PGSLQ P
Sbjct: 137 KHPDPGSLQVP 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.132    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,118
Number of Sequences: 336
Number of extensions: 2714
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)