Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A24
(409 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 209 5e-55
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 209 5e-55
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 209 5e-55
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 66 9e-12
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 46 1e-05
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 0.74
Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical p... 29 0.98
Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical pr... 29 0.98
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 29 0.98
Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical p... 28 2.3
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 2.3
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 2.3
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 2.3
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 27 5.2
U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical pr... 27 5.2
AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical ... 27 5.2
Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z99277-6|CAB16484.1| 677|Caenorhabditis elegans Hypothetical pr... 26 9.1
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 26 9.1
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 26 9.1
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 26 9.1
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 26 9.1
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 26 9.1
AC024746-12|AAF60401.1| 142|Caenorhabditis elegans Hypothetical... 26 9.1
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 26 9.1
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 209 bits (511), Expect = 5e-55
Identities = 96/133 (72%), Positives = 110/133 (82%)
Frame = +1
Query: 10 VAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTG 189
V DSK +P + A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTG
Sbjct: 291 VCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTG 350
Query: 190 KSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFK 369
K ED PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 351 KKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKS 410
Query: 370 EAGGGKVTKAAEK 408
+ GKVTK+A+K
Sbjct: 411 DGSSGKVTKSAQK 423
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 209 bits (511), Expect = 5e-55
Identities = 96/133 (72%), Positives = 110/133 (82%)
Frame = +1
Query: 10 VAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTG 189
V DSK +P + A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTG
Sbjct: 325 VCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTG 384
Query: 190 KSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFK 369
K ED PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 385 KKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKS 444
Query: 370 EAGGGKVTKAAEK 408
+ GKVTK+A+K
Sbjct: 445 DGSSGKVTKSAQK 457
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 209 bits (511), Expect = 5e-55
Identities = 96/133 (72%), Positives = 110/133 (82%)
Frame = +1
Query: 10 VAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTG 189
V DSK +P + A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTG
Sbjct: 325 VCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTG 384
Query: 190 KSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFK 369
K ED PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 385 KKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKS 444
Query: 370 EAGGGKVTKAAEK 408
+ GKVTK+A+K
Sbjct: 445 DGSSGKVTKSAQK 457
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 66.1 bits (154), Expect = 9e-12
Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +1
Query: 55 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 234
F A+V+VL H I++GY+ VL +A + +D++TG+ + K +K +
Sbjct: 431 FDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKGVIATIDKKTGE--KKRAKFVKQDEK 488
Query: 235 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-VIKAV 360
I+ L +P +E F+E+P LGRF +RD +T+A+G V+K V
Sbjct: 489 CIMRLESPEPFVLEPFKEYPYLGRFTLRDEGKTIAIGKVLKVV 531
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 46.0 bits (104), Expect = 1e-05
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +1
Query: 55 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 234
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 487 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 546
Query: 235 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 360
A+V + + +E+F LGR R T+A G+++ V
Sbjct: 547 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 46.0 bits (104), Expect = 1e-05
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +1
Query: 55 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 234
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 505 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 564
Query: 235 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 360
A+V + + +E+F LGR R T+A G+++ V
Sbjct: 565 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 0.74
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 120 GLPHSPHSLQICRNQRESRPSYW*INR 200
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical
protein C25F9.13 protein.
Length = 224
Score = 29.5 bits (63), Expect = 0.98
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 179 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 298
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFLNLKLSIVPSTKWRPPSSCTMYPANSTFP 188
>Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical
protein C25F9.1 protein.
Length = 431
Score = 29.5 bits (63), Expect = 0.98
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 179 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 298
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFFNLKLEIVPSTKWRPPSSCTMYPANSTFP 188
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 29.5 bits (63), Expect = 0.98
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 152 LPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWS 277
LPK+ T V + TT+ P +PP +T PP +S
Sbjct: 264 LPKTTVAPTTTTVPRTTTTVPPTTTTVPPTTTTVPPITTTYS 305
>Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical
protein K07A1.9b protein.
Length = 457
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 328 ASCHARRNDRGVGIPGRTPHTGAW 257
+SC +NDRG P R+ +GAW
Sbjct: 15 SSCGYCKNDRGERTPARSAKSGAW 38
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 118 LDCHTAHIACKFAEIKEKVDRRTGKSTE 201
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 118 LDCHTAHIACKFAEIKEKVDRRTGKSTE 201
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 118 LDCHTAHIACKFAEIKEKVDRRTGKSTE 201
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 25 KNNPPRGAAD-FTAQVIVLNHP 87
K NPP+GAAD F +V+ L+ P
Sbjct: 279 KANPPQGAADKFHVKVVTLHEP 300
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 25 KNNPPRGAAD-FTAQVIVLNHP 87
K NPP+GAAD F +V+ L+ P
Sbjct: 279 KANPPQGAADKFHVKVVTLHEP 300
>U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical
protein F47C10.4 protein.
Length = 357
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 35 HPGELQTSQRKSLC*ITQVKYQTDTHLYWI 124
H G + ++ SLC +T Y+ +LYWI
Sbjct: 311 HNGSSRFTELLSLCTVTNKYYEDVQYLYWI 340
>AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical
protein Y55F3AM.9 protein.
Length = 379
Score = 27.1 bits (57), Expect = 5.2
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 154 AEIKEKVDRRTGKSTEDNPKS 216
AEI + +D+ GKSTE++P++
Sbjct: 27 AEILQSLDKSLGKSTEESPEA 47
>Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical
protein K01C8.3b protein.
Length = 705
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 224 LVMPPLSTWFPPSPCVWSPSRNSHPSVVS 310
L+MP ++ W P + P+ NS PS+++
Sbjct: 139 LIMPGITHWQHPRFHAYFPAGNSFPSIIA 167
>Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical
protein K01C8.3a protein.
Length = 650
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 224 LVMPPLSTWFPPSPCVWSPSRNSHPSVVS 310
L+MP ++ W P + P+ NS PS+++
Sbjct: 139 LIMPGITHWQHPRFHAYFPAGNSFPSIIA 167
>Z99277-6|CAB16484.1| 677|Caenorhabditis elegans Hypothetical
protein Y53C12A.1 protein.
Length = 677
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 170 KSTVVLVNQQRTTLNP-LNLVMPPLSTWFPPSPCVWSPSRNSHPSVVSP 313
+ T + ++R + P P + PP+ +WS + S P +V+P
Sbjct: 36 RETPLSTKRERQAITPRFRRPAPKMIKTMPPTRSIWSVRKESVPLLVTP 84
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 9.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 118 LDCHTAHIACKFAEIKEKVDRRTGKSTE 201
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 26.2 bits (55), Expect = 9.1
Identities = 23/74 (31%), Positives = 29/74 (39%)
Frame = +2
Query: 101 TDTHLYWIATQPT*PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSP 280
T T + I T PT PANL T VN +T P V P T P P V +
Sbjct: 508 TPTTVGTIGTSPTAPANL----TTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTT 563
Query: 281 SRNSHPSVVSPCVT 322
+ + S + T
Sbjct: 564 TPTTTTSTTTTTTT 577
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 9.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 118 LDCHTAHIACKFAEIKEKVDRRTGKSTE 201
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 64 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKE 168
Q+++LNHP QI +L A C+F ++E
Sbjct: 1375 QILLLNHPNQIGKSTCYILMSDVAKY-CRFLVVEE 1408
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 26.2 bits (55), Expect = 9.1
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = -3
Query: 389 TLPPPASLKFTAFITPTATVCLMSRTAKRPRGGNSWKDSTHRGL---EGTRLTMAASP 225
T PP + + T TP TV + RT P +S + HR +G RL P
Sbjct: 346 TTVPPTTTRTTTTTTPRPTVPTVPRTTTVPSWWSSAQAPRHRDTSPRQGFRLKAVIDP 403
>AC024746-12|AAF60401.1| 142|Caenorhabditis elegans Hypothetical
protein Y110A2AL.1 protein.
Length = 142
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 37 PRGAADFTAQVIVLNHPGQI 96
P+GA DF AQ++ PG I
Sbjct: 75 PQGAVDFVAQIVEGRRPGYI 94
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 26.2 bits (55), Expect = 9.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 118 LDCHTAHIACKFAEIKEKVDRRTGKSTE 201
L C ++C+ + +K+K + T KS E
Sbjct: 525 LQCQNEKLSCELSSLKDKHEEATSKSIE 552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.132 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,230,823
Number of Sequences: 27780
Number of extensions: 268573
Number of successful extensions: 857
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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