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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A24
         (409 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ...   196   5e-51
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ...   196   5e-51
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ...   196   5e-51
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ...   196   5e-51
At1g35550.1 68414.m04414 elongation factor Tu C-terminal domain-...   146   7e-36
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,...    69   1e-12
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E...    52   2e-07
At4g27900.2 68417.m04005 expressed protein                             32   0.17 
At4g27900.1 68417.m04004 expressed protein                             32   0.17 
At1g45160.1 68414.m05177 protein kinase family protein contains ...    31   0.39 
At1g28280.1 68414.m03471 VQ motif-containing protein contains PF...    29   0.91 
At5g63950.1 68418.m08030 SNF2 domain-containing protein / helica...    28   2.1  
At2g21450.1 68415.m02552 SNF2 domain-containing protein / helica...    28   2.1  
At5g11940.1 68418.m01396 subtilase family protein contains simil...    28   2.8  
At4g02560.1 68417.m00350 homeobox protein LUMINIDEPENDENS (LD) i...    27   3.7  
At5g57160.1 68418.m07140 DNA ligase IV identical to DNA ligase I...    27   4.8  
At5g38560.1 68418.m04662 protein kinase family protein contains ...    27   6.4  
At4g15130.1 68417.m02324 cholinephosphate cytidylyltransferase, ...    27   6.4  
At5g55390.1 68418.m06901 hydroxyproline-rich glycoprotein family...    26   8.5  
At5g53770.1 68418.m06681 nucleotidyltransferase family protein c...    26   8.5  
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ...    26   8.5  
At3g44350.1 68416.m04765 no apical meristem (NAM) family protein...    26   8.5  
At2g41140.1 68415.m05081 calcium-dependent protein kinase, putat...    26   8.5  
At1g22670.1 68414.m02833 protease-associated zinc finger (C3HC4-...    26   8.5  

>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
           identical to SWISS-PROT:P13905 elongation factor 1-alpha
           (EF-1-alpha) [Arabidopsis thaliana]
          Length = 449

 Score =  196 bits (478), Expect = 5e-51
 Identities = 88/133 (66%), Positives = 111/133 (83%)
 Frame = +1

Query: 10  VAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTG 189
           VA +SK++P +GAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+EI  K+DRR+G
Sbjct: 313 VASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSG 372

Query: 190 KSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFK 369
           K  E  PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK+V+ K
Sbjct: 373 KEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 432

Query: 370 EAGGGKVTKAAEK 408
           +  G KVTKAA K
Sbjct: 433 DPTGAKVTKAAVK 445


>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  196 bits (478), Expect = 5e-51
 Identities = 88/133 (66%), Positives = 111/133 (83%)
 Frame = +1

Query: 10  VAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTG 189
           VA +SK++P +GAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+EI  K+DRR+G
Sbjct: 313 VASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSG 372

Query: 190 KSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFK 369
           K  E  PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK+V+ K
Sbjct: 373 KEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 432

Query: 370 EAGGGKVTKAAEK 408
           +  G KVTKAA K
Sbjct: 433 DPTGAKVTKAAVK 445


>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  196 bits (478), Expect = 5e-51
 Identities = 88/133 (66%), Positives = 111/133 (83%)
 Frame = +1

Query: 10  VAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTG 189
           VA +SK++P +GAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+EI  K+DRR+G
Sbjct: 313 VASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSG 372

Query: 190 KSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFK 369
           K  E  PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK+V+ K
Sbjct: 373 KEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 432

Query: 370 EAGGGKVTKAAEK 408
           +  G KVTKAA K
Sbjct: 433 DPTGAKVTKAAVK 445


>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  196 bits (478), Expect = 5e-51
 Identities = 88/133 (66%), Positives = 111/133 (83%)
 Frame = +1

Query: 10  VAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTG 189
           VA +SK++P +GAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+EI  K+DRR+G
Sbjct: 313 VASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSG 372

Query: 190 KSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFK 369
           K  E  PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK+V+ K
Sbjct: 373 KEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 432

Query: 370 EAGGGKVTKAAEK 408
           +  G KVTKAA K
Sbjct: 433 DPTGAKVTKAAVK 445


>At1g35550.1 68414.m04414 elongation factor Tu C-terminal
           domain-containing protein similar to SP|P13905
           Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis
           thaliana}; contains Pfam profile PF03143: Elongation
           factor Tu C-terminal domain
          Length = 104

 Score =  146 bits (353), Expect = 7e-36
 Identities = 64/104 (61%), Positives = 81/104 (77%)
 Frame = +1

Query: 76  LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVP 255
           +NH GQI NGYTPVLDCHT+HIA KF+EI  K+D RTG   E  PK +K+ +AAI+N+ P
Sbjct: 1   MNHLGQIKNGYTPVLDCHTSHIAVKFSEILTKIDWRTGHEIEKEPKFLKNSEAAIINMTP 60

Query: 256 SKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGK 387
           +KP+ VE++  +PPLGRFA+RDMRQTV VGVIK+V  K+  G K
Sbjct: 61  TKPMVVEAYSAYPPLGRFAIRDMRQTVGVGVIKSVVKKDPSGAK 104


>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
           putative similar to EF-1-alpha-related GTP-binding
           protein gi|1009232|gb|AAA79032
          Length = 532

 Score = 68.9 bits (161), Expect = 1e-12
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
 Frame = +1

Query: 31  NPPRGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTED 204
           NP     +F AQ+ +L        + GY  +L  H     C+  E+K ++D +T K  + 
Sbjct: 414 NPVPAVTEFVAQLQILELLDNAIFTAGYKAILHIHAVVEECEIIELKSQIDLKTRKPMKK 473

Query: 205 NPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 351
               +K+G A +  +  +  +C+E F +FP LGRF +R   +T+AVG +
Sbjct: 474 KVLFVKNGAAVVCRIQVTNSICIEKFSDFPQLGRFTLRTEGKTIAVGKV 522


>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
           EF-1-alpha, putative contains similarity to
           SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
           [Aeropyrum pernix]
          Length = 667

 Score = 51.6 bits (118), Expect = 2e-07
 Identities = 30/109 (27%), Positives = 52/109 (47%)
 Frame = +1

Query: 34  PPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPK 213
           P   A      V+VL     I  G       H A  A    ++   +D +TG+ T+ +P+
Sbjct: 555 PVSVATHLELMVLVLEGATPILLGSQLEFHVHHAKEAATVVKLVAMLDPKTGQPTKKSPR 614

Query: 214 SIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 360
            + +  +A++ +    P+CVE+F E   LGR  +R   +TVA+G +  +
Sbjct: 615 CLTAKQSAMLEVSLQNPVCVETFSESRALGRVFLRSSGRTVAMGKVTRI 663


>At4g27900.2 68417.m04005 expressed protein
          Length = 261

 Score = 31.9 bits (69), Expect = 0.17
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +1

Query: 208 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 300
           PKS+ SG+ + +++V  K   ++ F +FPP+
Sbjct: 144 PKSVSSGNLSSMDMVEHKDAVIQGFPDFPPV 174


>At4g27900.1 68417.m04004 expressed protein
          Length = 261

 Score = 31.9 bits (69), Expect = 0.17
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +1

Query: 208 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 300
           PKS+ SG+ + +++V  K   ++ F +FPP+
Sbjct: 144 PKSVSSGNLSSMDMVEHKDAVIQGFPDFPPV 174


>At1g45160.1 68414.m05177 protein kinase family protein contains
           eukaryotic protein kinase domain, INTERPRO:IPR000719
          Length = 1067

 Score = 30.7 bits (66), Expect = 0.39
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = +1

Query: 106 YTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESF- 282
           Y P   CH    AC      E++  R   S +D  K IK  +    N   SK + ++SF 
Sbjct: 82  YKPKYSCHPPKYACSSTTSSEEIKLRGKNSGKDEEKMIKISE---TNPPCSKSMGIKSFS 138

Query: 283 QEFPPLG 303
            E  P G
Sbjct: 139 HELGPRG 145


>At1g28280.1 68414.m03471 VQ motif-containing protein contains
           PF05678: VQ motif
          Length = 247

 Score = 29.5 bits (63), Expect = 0.91
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 209 LNPLNLVMPPLSTWFPP-SPCVWSPSRNSHPSVVSPCVT 322
           +NPLN V  P+++ F P  P + SPS    PS+V   VT
Sbjct: 140 INPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSPVT 178


>At5g63950.1 68418.m08030 SNF2 domain-containing protein / helicase
           domain-containing protein low similarity to SP|Q03468
           Excision repair protein ERCC-6 (Cockayne syndrome
           protein CSB) {Homo sapiens}; contains PFam profiles
           PF00271: Helicase conserved C-terminal domain, PF00176:
           SNF2 family N-terminal domain
          Length = 1090

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 357 SLYYTDGDRLPHVTHGETTEGWEFLEGLHTQGLGGNQVDNGGI 229
           +L YT   ++  + +    EG  +L  LHTQG GG   D+ G+
Sbjct: 364 NLSYTLPGKIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGL 406


>At2g21450.1 68415.m02552 SNF2 domain-containing protein / helicase
           domain-containing protein low similarity to SP|Q61687
           Transcriptional regulator ATRX {Mus musculus}; contains
           PFam profiles PF00271: Helicase conserved C-terminal
           domain, PF00176: SNF2 family N-terminal domain
          Length = 816

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 154 QICRLCGLCGNPIQVCIRLIF 92
           ++CR+CGL   PI+  I ++F
Sbjct: 197 EVCRVCGLIKKPIESMIEVVF 217


>At5g11940.1 68418.m01396 subtilase family protein contains
           similarity to subtilase; SP1 GI:9957714 from [Oryza
           sativa]
          Length = 762

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 351 YYTDGDRLPHVTHGETTEGWEFLEGLHTQGLGGNQVDNG 235
           Y +  + LPH TH  +T G  F+  +   G G   +  G
Sbjct: 217 YMSARESLPHGTHVASTAGGSFVSNVSDNGFGVGTIRGG 255


>At4g02560.1 68417.m00350 homeobox protein LUMINIDEPENDENS (LD)
           identical to Homeobox protein LUMINIDEPENDENS
           (Swiss-Prot:Q38796) [Arabidopsis thaliana]
          Length = 953

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 190 KSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVN 363
           K+++ +P     GD+ IV   P KPL + S ++ PP+     +    T  +  ++ VN
Sbjct: 447 KNSKKDPLPSAIGDSKIV--APEKPLALHSAKDSPPIQNNEAK-TEDTPVLSTVQPVN 501


>At5g57160.1 68418.m07140 DNA ligase IV identical to DNA ligase IV
           GI:9651815 from [Arabidopsis thaliana]; identical to
           cDNA DNA ligase IV, GI:9651814
          Length = 1219

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
 Frame = +1

Query: 178 RRTGKSTEDNP---KSIKSGDAAIVNLVPSK 261
           ++  +ST+DNP   KS K G+   V+LVPS+
Sbjct: 610 QKESESTQDNPKVNKSSKRGEKKNVSLVPSQ 640


>At5g38560.1 68418.m04662 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 681

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 233 PPLSTWFPPSPCVWSPSRNSHPSVVSPCVT 322
           PP+ +  PP P V SP  +S P    P +T
Sbjct: 49  PPVVSSSPPPPVVSSPPPSSSPPPSPPVIT 78


>At4g15130.1 68417.m02324 cholinephosphate cytidylyltransferase,
           putative / phosphorylcholine transferase, putative /
           CTP:phosphocholine cytidylyltransferase, putative strong
           similarity to CTP:phosphorylcholine cytidylyltransferase
           [Arabidopsis thaliana] GI:21668498; contains Pfam
           profile PF01467: Cytidylyltransferase; identical to cDNA
           AtCCT2 for CTP:phosphorylcholine cytidylyltransferase
           GI:21668499
          Length = 299

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 381 TTCFLEVHSLYYTDGDRLPHV-THGETTEGWEFLEGL 274
           TT FL+ H + Y   D LP+  T G   + +EF++ +
Sbjct: 98  TTEFLDKHKIDYVAHDALPYADTSGAGNDVYEFVKSI 134


>At5g55390.1 68418.m06901 hydroxyproline-rich glycoprotein family
           protein
          Length = 1332

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 188 VNQQRTTLNPLNLVMPPLSTW 250
           VN++   L   NLV PPLS W
Sbjct: 899 VNEEDKQLEDWNLVPPPLSLW 919


>At5g53770.1 68418.m06681 nucleotidyltransferase family protein
           contains Pfam domains PF03828: PAP/25A associated
           domain, PF01909: Nucleotidyltransferase domain
          Length = 530

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 148 KFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCV 273
           KF E K  +        E+ PK+ +    A+  L P +PLC+
Sbjct: 223 KFVEKKSNIAFDLSFDMENGPKAAEFIQDAVSKLPPLRPLCL 264


>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
            subunit (RPB205) (RPII) (RPB1) nearly identical to
            P|P18616 DNA-directed RNA polymerase II largest subunit
            (EC 2.7.7.6) {Arabidopsis thaliana}
          Length = 1840

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +2

Query: 134  PT*PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSH 295
            PT P+  P+S + S  +  +     L+P +   P    + P SP  +SP+  S+
Sbjct: 1722 PTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-YSPTSPSY 1774


>At3g44350.1 68416.m04765 no apical meristem (NAM) family protein
           Tobacco elicitor-responsive gene (TERN), NAC-domain
           protein, Nicotiana tabacum, EMBL:AB021178
          Length = 228

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -3

Query: 263 GLE-GTRLTMAASPDLMDLGLSSVDLPVRRSTFS 165
           G+E  +R T++ SP+    G + VDLPV  +T +
Sbjct: 172 GVETSSRATISTSPETSHSGGNQVDLPVNATTIT 205


>At2g41140.1 68415.m05081 calcium-dependent protein kinase, putative
           / CDPK, putative similar to calcium/calmodulin-dependent
           protein kinase CaMK3 [Nicotiana tabacum]
           gi|16904226|gb|AAL30820
          Length = 576

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 145 CKFAEIKEKVDRRTGKSTEDNPKSI 219
           CK  E+ +K+ +R GK +ED+ K +
Sbjct: 207 CKGGELLDKILQRGGKYSEDDAKKV 231


>At1g22670.1 68414.m02833 protease-associated zinc finger
           (C3HC4-type RING finger) family protein contains Pfam
           domain, PF02225: protease-associated (PA) domain and
           Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
           finger); similar to ReMembR-H2 protein JR702
           [Arabidopsis thaliana] gi|6942149|gb|AAF32326
          Length = 422

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = +1

Query: 115 VLDC-HTAHIACKFAEIKE-----KVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVE 276
           VL C H  H+AC  + +        V +R  ++T D P + +S      ++  S  +C++
Sbjct: 247 VLPCSHKFHVACVDSWLISWRTFCPVCKRDARTTADEPLATESTPFLSSSIATSSLVCID 306

Query: 277 SFQEFPPLG 303
           S    PPLG
Sbjct: 307 S----PPLG 311


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.315    0.132    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,762,271
Number of Sequences: 28952
Number of extensions: 251475
Number of successful extensions: 845
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 605614832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

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