Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A23
(335 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 135 2e-31
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 120 5e-27
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 113 7e-25
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 110 7e-24
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 105 2e-22
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 71 5e-12
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 67 6e-11
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-09
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 58 4e-08
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 48 3e-05
UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1; ... 45 3e-04
UniRef50_A5B3P3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.003
UniRef50_A7QSF2 Cluster: Chromosome chr12 scaffold_159, whole ge... 39 0.019
UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S riboso... 38 0.033
UniRef50_A7DKP6 Cluster: UreE urease accessory domain protein; n... 38 0.044
UniRef50_A4S810 Cluster: Predicted protein; n=1; Ostreococcus lu... 36 0.14
UniRef50_Q8JJW3 Cluster: Putative movement protein; n=1; Sweet p... 32 2.2
UniRef50_A7CFA3 Cluster: Putative uncharacterized protein precur... 31 3.8
UniRef50_A1WD43 Cluster: Excinuclease ABC, A subunit; n=8; Burkh... 31 3.8
UniRef50_A1HMR5 Cluster: Putative uncharacterized protein; n=1; ... 31 3.8
UniRef50_Q7S2U4 Cluster: Predicted protein; n=1; Neurospora cras... 31 3.8
UniRef50_Q6BNC8 Cluster: Debaryomyces hansenii chromosome E of s... 31 3.8
UniRef50_Q4P1J5 Cluster: Putative uncharacterized protein; n=1; ... 31 3.8
UniRef50_Q8AXX1 Cluster: Putative gag protein; n=1; Danio rerio|... 31 5.1
UniRef50_Q10EE7 Cluster: AP2 domain containing protein, expresse... 26 5.5
UniRef50_UPI0000382A80 Cluster: COG2371: Urease accessory protei... 31 6.7
UniRef50_Q4SWS4 Cluster: Chromosome undetermined SCAF13541, whol... 31 6.7
UniRef50_Q6NB56 Cluster: Hydrogenase expression/formation protei... 31 6.7
UniRef50_Q4Q502 Cluster: Putative uncharacterized protein; n=3; ... 31 6.7
UniRef50_A0RUE5 Cluster: Ribosomal protein L15; n=1; Cenarchaeum... 31 6.7
UniRef50_Q97BV4 Cluster: 50S ribosomal protein L15P; n=4; Thermo... 31 6.7
UniRef50_Q4RUT1 Cluster: Chromosome 12 SCAF14993, whole genome s... 30 8.9
UniRef50_Q45H72 Cluster: Laminin alpha 1; n=9; Euteleostomi|Rep:... 30 8.9
UniRef50_A2Q0L5 Cluster: Repeat element protein-d7.2; n=1; Hypos... 30 8.9
UniRef50_Q9VJ69 Cluster: CG31790-PA; n=5; Diptera|Rep: CG31790-P... 30 8.9
UniRef50_Q584L0 Cluster: Putative uncharacterized protein; n=2; ... 30 8.9
UniRef50_Q4CYX5 Cluster: Putative uncharacterized protein; n=2; ... 30 8.9
UniRef50_A0BVI8 Cluster: Chromosome undetermined scaffold_13, wh... 30 8.9
UniRef50_Q6NWY9 Cluster: PRP40 pre-mRNA processing factor 40 hom... 30 8.9
UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9; Euryar... 30 8.9
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 135 bits (326), Expect = 2e-31
Identities = 58/101 (57%), Positives = 71/101 (70%)
Frame = +3
Query: 21 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNYHMRR 200
+KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++YH++R
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65
Query: 201 NKDFCPVLNLDKLWTLVSEQARLTYASATDGKVPVINIVKS 323
N+ FCP +NLDKLWTLVSEQ R+ A G P+I++V+S
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 120 bits (290), Expect = 5e-27
Identities = 50/73 (68%), Positives = 62/73 (84%)
Frame = +3
Query: 105 NAGGEHHHRINMDKYHPGYFGKLGMRNYHMRRNKDFCPVLNLDKLWTLVSEQARLTYASA 284
NAGG+HHHRIN DKYHPGYFGK+GMRN+H+R+N +CP +NLDKLW+LVSE+ R TYA
Sbjct: 20 NAGGQHHHRINFDKYHPGYFGKVGMRNFHVRKNGLYCPTVNLDKLWSLVSEKTRTTYAEK 79
Query: 285 TDGKVPVINIVKS 323
D K PVI++VK+
Sbjct: 80 KD-KAPVIDVVKA 91
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 113 bits (272), Expect = 7e-25
Identities = 53/104 (50%), Positives = 66/104 (63%)
Frame = +3
Query: 9 ATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNY 188
AT+ KK RK RGHVS NAGG HHHRI DKYHPGYFGK+GMR +
Sbjct: 2 ATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYF 61
Query: 189 HMRRNKDFCPVLNLDKLWTLVSEQARLTYASATDGKVPVINIVK 320
H RNK FCP++NLDKLW+LV E + A ++ VP+I++ +
Sbjct: 62 HKLRNKFFCPIVNLDKLWSLVPEDVK---AKSSKDNVPLIDVTQ 102
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 110 bits (264), Expect = 7e-24
Identities = 53/103 (51%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Frame = +3
Query: 21 KKTRKLRGHVSXXXXXXXXXXXXXXXXXN--AGGEHHHRINMDKYHPGYFGKLGMRNYHM 194
KKTRKLRGHVS AGG HHHRI M+K+HPGY+GKLGMR +H+
Sbjct: 6 KKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGMRTFHL 65
Query: 195 RRNKDFCPVLNLDKLWTLVSEQARLTYASATDGKVPVINIVKS 323
++N CPV+N+DKLW+LVS+ R YA KVPVI++ K+
Sbjct: 66 KKNPLHCPVVNIDKLWSLVSDATRQKYAE-DKKKVPVIDVTKA 107
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 105 bits (252), Expect = 2e-22
Identities = 49/101 (48%), Positives = 61/101 (60%)
Frame = +3
Query: 12 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNYH 191
T K RK RGHVS AGG+HHHRI MDKYHPGYFGK+GMR++H
Sbjct: 54 TQLHKNRKKRGHVSAGHGRIGKHRKHPAGRGMAGGQHHHRIMMDKYHPGYFGKVGMRHFH 113
Query: 192 MRRNKDFCPVLNLDKLWTLVSEQARLTYASATDGKVPVINI 314
+N+ CP +N+DKLWTLV + R A T + PVI++
Sbjct: 114 KLKNQTVCPTINIDKLWTLVGTEKREECAKNT-SQAPVIDL 153
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 70.9 bits (166), Expect = 5e-12
Identities = 35/98 (35%), Positives = 51/98 (52%)
Frame = +3
Query: 21 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNYHMRR 200
KKTRKLRGHVS AGG H + ++HP Y GK GMR YH +
Sbjct: 6 KKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRVYHRKE 65
Query: 201 NKDFCPVLNLDKLWTLVSEQARLTYASATDGKVPVINI 314
N D+ ++ +LW ++ ++ R + + KVPVI++
Sbjct: 66 NSDYARPISSARLWGMIPKEQRYDFLDNPE-KVPVIDV 102
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/93 (34%), Positives = 49/93 (52%)
Frame = +3
Query: 12 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNYH 191
T +++RK RGHVS N+GG+HHH+I +KYH +FGK GMR Y
Sbjct: 3 TDIRRSRKKRGHVSSGHGRVGKHRKHPGGRGNSGGQHHHKIFFEKYHKKHFGKTGMRYYR 62
Query: 192 MRRNKDFCPVLNLDKLWTLVSEQARLTYASATD 290
+ +F +NLDK+ + + L +++D
Sbjct: 63 KLKQNNFNKSINLDKISDKLVKNMHLHTKNSSD 95
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 62.1 bits (144), Expect = 2e-09
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +3
Query: 114 GEHHHRINMDKYHPGYFGKLGMRNYHMRRNKDFCPVLNLDKLWTLV-SEQARLTYASATD 290
G ++ + YFGK+GMR++H+ RN F PV+NLDKLWTLV +EQ + A +T+
Sbjct: 77 GSQEMEVDREIGRDSYFGKVGMRHFHLTRNSSFRPVVNLDKLWTLVPAEQRKGLTADSTE 136
Query: 291 GKVPVIN 311
VPVI+
Sbjct: 137 --VPVID 141
Score = 50.8 bits (116), Expect = 6e-06
Identities = 24/48 (50%), Positives = 25/48 (52%)
Frame = +3
Query: 12 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHP 155
T KTRK RGHVS AGG+HHHR NMDKYHP
Sbjct: 3 THLSKTRKHRGHVSAGNGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHP 50
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 58.0 bits (134), Expect = 4e-08
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +3
Query: 141 DKYHPGYFGKLGMRNYHMRRNKDFCPVLNLDKLWTLVSEQA 263
DK+HPG FGK+GMR++H R K CP++++DKLW++V A
Sbjct: 28 DKHHPGNFGKVGMRHFHKLRIKLHCPIVHIDKLWSMVPPAA 68
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 48.4 bits (110), Expect = 3e-05
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +3
Query: 12 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNYH 191
T KK+RK+RG S +GG+HHH+I ++Y YF K GMR Y+
Sbjct: 3 TKLKKSRKMRGKNSSGHGRINKHRKNPGGKGKSGGQHHHKIIFERYRETYFRKTGMRIYN 62
Query: 192 MRR 200
+ +
Sbjct: 63 LEK 65
>UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1;
n=1; Arabidopsis thaliana|Rep: Putative 60S ribosomal
protein L27a-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 104
Score = 45.2 bits (102), Expect = 3e-04
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 12 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGK--LGMRN 185
TS+KKTR LR HVS H R + PG G +GMR
Sbjct: 3 TSRKKTRNLREHVSVG---------------------HGRFGKHRKLPGSRGNAGVGMRY 41
Query: 186 YHMRRNKDFCPVLNLDKLWTLV 251
+H RNK +C ++NLDKLW++V
Sbjct: 42 FHKLRNKFYCQIVNLDKLWSMV 63
>UniRef50_A5B3P3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 181
Score = 41.9 bits (94), Expect = 0.003
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -2
Query: 241 HSLSRFKTGQKSLFLLMW*FLIPSLPKYPGWYLS 140
HSLS + GQ SL +W LIP+ PK PGW LS
Sbjct: 3 HSLSTWTIGQWSLMRSLWKCLIPTFPKLPGWCLS 36
>UniRef50_A7QSF2 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 442
Score = 39.1 bits (87), Expect = 0.019
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = -2
Query: 262 ACSETRVHSLSRFKTGQKSLFLLMW*FLIPSLPKYPGWYLS 140
A T HSLS + GQ SL +W LIP+ K PGW LS
Sbjct: 349 AAGGTMDHSLSMWMIGQWSLMRSLWKCLIPTFLKLPGWCLS 389
>UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S ribosomal
protein L27a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L27a - Rattus
norvegicus
Length = 86
Score = 38.3 bits (85), Expect = 0.033
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = +3
Query: 21 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPG 158
+KTRK +GHVS NAGGEH HRIN PG
Sbjct: 6 RKTRKFQGHVSDSHSRISKHHKHRGGQRNAGGEHLHRINCYYKVPG 51
>UniRef50_A7DKP6 Cluster: UreE urease accessory domain protein; n=2;
Methylobacterium extorquens PA1|Rep: UreE urease
accessory domain protein - Methylobacterium extorquens
PA1
Length = 212
Score = 37.9 bits (84), Expect = 0.044
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 126 DGAHHQHYHVHQDAYGACRYDHDH 55
D AHH H H H A+G C +DH H
Sbjct: 171 DHAHHDHDHGHSHAHGGCGHDHSH 194
>UniRef50_A4S810 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 263
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -3
Query: 129 CDGAHHQHYHVHQDAYGACRYDHDHG 52
CDG HH H H H A G + +HDHG
Sbjct: 148 CDGTHHSHGHGHSHAEGE-KCEHDHG 172
>UniRef50_Q8JJW3 Cluster: Putative movement protein; n=1; Sweet
potato chlorotic stunt virus|Rep: Putative movement
protein - Sweet potato chlorotic stunt virus
Length = 518
Score = 32.3 bits (70), Expect = 2.2
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 105 NAGGEHHHRINMDKYHPGYFGKLGMRNYHMRRNKDFCPVLNLDKLWTLVSEQARLTY 275
N G + +YHPG FG + + HMR DF +LNL L+SE +++Y
Sbjct: 440 NRGDRARAMFKICEYHPGLFGSIPRIDNHMR--FDFFKLLNL----RLMSESEKVSY 490
>UniRef50_A7CFA3 Cluster: Putative uncharacterized protein
precursor; n=1; Ralstonia pickettii 12D|Rep: Putative
uncharacterized protein precursor - Ralstonia pickettii
12D
Length = 489
Score = 31.5 bits (68), Expect = 3.8
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -3
Query: 141 PC*FC-DGAHHQ-HYHVH-QDAYGACRYDHDHG 52
PC C DG HH H+H H D G DHDHG
Sbjct: 240 PCGSCHDGGHHHGHHHDHDHDHGGHPGGDHDHG 272
>UniRef50_A1WD43 Cluster: Excinuclease ABC, A subunit; n=8;
Burkholderiales|Rep: Excinuclease ABC, A subunit -
Acidovorax sp. (strain JS42)
Length = 1029
Score = 31.5 bits (68), Expect = 3.8
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = -3
Query: 189 GNFSYQVCQSTQGGTCPC*FCDGAHHQHYHVHQDAYGACRYDHDHGSR 46
G FS+ V Q + GG C DG H D Y C D HG R
Sbjct: 808 GRFSFNVAQGSGGGRCEACQGDGVVKVEMHFLPDVYVPC--DVCHGQR 853
>UniRef50_A1HMR5 Cluster: Putative uncharacterized protein; n=1;
Thermosinus carboxydivorans Nor1|Rep: Putative
uncharacterized protein - Thermosinus carboxydivorans
Nor1
Length = 409
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 117 HHQHYHVHQDAYGACRYDHDHG 52
HH H+H H + GA Y HDHG
Sbjct: 196 HHHHHHAHGNK-GAHAYRHDHG 216
>UniRef50_Q7S2U4 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 1134
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -3
Query: 159 TQGGTCPC*FCDGAHHQHYHVHQDAYGACRYDHDHGSRVL 40
T C C DG QH HV DAY H+H + L
Sbjct: 815 TDSCVCYCLASDGCLPQHLHVSFDAYSRICNQHEHKANAL 854
>UniRef50_Q6BNC8 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 1087
Score = 31.5 bits (68), Expect = 3.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 122 PSQNQHGQVPPWVLWQTWYEKLPHEK 199
P+ + Q P W+ W T +E+ P+EK
Sbjct: 290 PNNQKSVQCPDWISWSTLFERQPYEK 315
>UniRef50_Q4P1J5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1092
Score = 31.5 bits (68), Expect = 3.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 117 HHQHYHVHQDAYGACRYDHDHG 52
HH H H H + + A +DH HG
Sbjct: 1058 HHDHGHSHSNGHSAHAHDHSHG 1079
>UniRef50_Q8AXX1 Cluster: Putative gag protein; n=1; Danio
rerio|Rep: Putative gag protein - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 612
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -3
Query: 273 TLVLPAQRPESTVCQDLKQGRNPCF-FSCGNFSYQVCQSTQGGTCPC*FCDGAH 115
T +PA P S L NPCF F+ G C+ C +C GAH
Sbjct: 534 TSAIPALLPPSLTSSQLSSSSNPCFSFNIGRCFRHPCKFPH----TCNYCGGAH 583
>UniRef50_Q10EE7 Cluster: AP2 domain containing protein, expressed;
n=11; Spermatophyta|Rep: AP2 domain containing protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 759
Score = 25.8 bits (54), Expect(2) = 5.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 126 DGAHHQHYHVHQ 91
D HH H+HVHQ
Sbjct: 42 DVGHHHHHHVHQ 53
Score = 23.8 bits (49), Expect(2) = 5.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -3
Query: 117 HHQHYHVHQDAYG 79
HH H H HQ +G
Sbjct: 47 HHHHVHQHQQQHG 59
>UniRef50_UPI0000382A80 Cluster: COG2371: Urease accessory protein
UreE; n=1; Magnetospirillum magnetotacticum MS-1|Rep:
COG2371: Urease accessory protein UreE -
Magnetospirillum magnetotacticum MS-1
Length = 201
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 120 AHHQHYHVHQDAYGACRYDHDH 55
AHH H H H +G+C +DH H
Sbjct: 179 AHHDHDHGHH-GHGSCGHDHHH 199
>UniRef50_Q4SWS4 Cluster: Chromosome undetermined SCAF13541, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF13541,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1251
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 9/46 (19%)
Frame = -3
Query: 156 QGGT--CPC*F--CDGAHHQHYHVHQ-----DAYGACRYDHDHGSR 46
QG T CPC C +HH H+H HQ A C + H H R
Sbjct: 155 QGSTSACPCCLSACTYSHHHHHHNHQTHPSHPATPLCLHHHHHHQR 200
>UniRef50_Q6NB56 Cluster: Hydrogenase expression/formation protein
hypB; n=4; Bradyrhizobiaceae|Rep: Hydrogenase
expression/formation protein hypB - Rhodopseudomonas
palustris
Length = 318
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 126 DG-AHHQHYHVHQDAYGACRYDHDHG 52
DG AHH H+H D +DHDHG
Sbjct: 30 DGHAHHHHHHHDHDHAHPHTHDHDHG 55
>UniRef50_Q4Q502 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1039
Score = 30.7 bits (66), Expect = 6.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 123 GAHHQHYHVHQDAYGACRYDHDH 55
G HH H+H H +GA + H H
Sbjct: 299 GRHHAHHHGHSHGHGAPHHHHRH 321
>UniRef50_A0RUE5 Cluster: Ribosomal protein L15; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L15 - Cenarchaeum
symbiosum
Length = 138
Score = 30.7 bits (66), Expect = 6.7
Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Frame = +3
Query: 9 ATSKKKTRKLRG-HVSXXXXXXXXXXXXXXXXXNAGGE-HHHRINMDKYHPGYFGKLGMR 182
AT +KTRKLRG G+ HH +M K PG+FG
Sbjct: 2 ATRNRKTRKLRGSRTHGWGQVGQHRASGHKGGVGVSGQLKHHFSSMLKEDPGHFGHDSTH 61
Query: 183 NYHMRRNKDFCPVLNLDKLWT 245
H K + V +LD T
Sbjct: 62 PPHSNAAKKWASVRDLDDFHT 82
>UniRef50_Q97BV4 Cluster: 50S ribosomal protein L15P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L15P -
Thermoplasma volcanium
Length = 145
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 18 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNYHM 194
+++T+KLRG NAG H I M KY P +FG G ++H+
Sbjct: 3 RERTKKLRGGHYGRGMKAGRGKGKKGGRGNAGMGKHKWIWMVKYDPLHFGGKGFTSHHL 61
>UniRef50_Q4RUT1 Cluster: Chromosome 12 SCAF14993, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 12
SCAF14993, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 408
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -3
Query: 141 PC*FCDGAHHQHYHVHQDAYG-ACRYDHDHG 52
PC + H H HVH +G A + HDHG
Sbjct: 89 PCNYHSRTQHAHAHVHAHTHGHAHGHAHDHG 119
>UniRef50_Q45H72 Cluster: Laminin alpha 1; n=9; Euteleostomi|Rep:
Laminin alpha 1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 3075
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 6/63 (9%)
Frame = -3
Query: 219 QGRNPCFFSCGNFSYQVCQSTQGGTCPC*F------CDGAHHQHYHVHQDAYGACRYDHD 58
+G PC C + G C C CD HH +Y+ ++ AC H
Sbjct: 949 EGCRPC--ECNQSGALSASCDEEGRCQCITGVTGDKCDRCHHGYYNFKENGCTACDCAHT 1006
Query: 57 HGS 49
HG+
Sbjct: 1007 HGN 1009
>UniRef50_A2Q0L5 Cluster: Repeat element protein-d7.2; n=1;
Hyposoter fugitivus ichnovirus|Rep: Repeat element
protein-d7.2 - Hyposoter fugitivus ichnovirus
Length = 242
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 171 VCQSTQGGTCPC*FCDGAHHQHYHVHQD-AYGACRYDHDH 55
+C + + +CPC + H HY +D + C Y+H H
Sbjct: 138 MCSNCEHASCPCHLGNVERHGHYPPFRDQSTDICNYNHFH 177
>UniRef50_Q9VJ69 Cluster: CG31790-PA; n=5; Diptera|Rep: CG31790-PA -
Drosophila melanogaster (Fruit fly)
Length = 826
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -3
Query: 129 CDG-AHHQHYHVHQDAYGACRYDHDHG 52
CD A H H+H H G C + H HG
Sbjct: 444 CDHEAPHHHHHHHSPDKGCCDHGHGHG 470
>UniRef50_Q584L0 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 625
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 188 PHEKKQGFLPCFKS*QTVDSGL*AGKTNVCICHRWQGAC 304
PH + F CF QT+ G +G C C WQGAC
Sbjct: 469 PHNEMHTF--CFMDEQTIMIGDESGNIRCC-CGPWQGAC 504
>UniRef50_Q4CYX5 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 915
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 165 GKLGMRNYHMRRNKDFCPVLNLDKLWTLVSEQARLTYASATDGKVPV 305
GK G + +R +DF + N D+L++L + L S+T VPV
Sbjct: 120 GKAGGKKDRAKREEDFFVIENADQLFSLSFDLIELLTLSSTRRSVPV 166
>UniRef50_A0BVI8 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1677
Score = 30.3 bits (65), Expect = 8.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 210 NPCFFSCGNFSYQVCQSTQGG 148
NPCFFSCG +C + G
Sbjct: 662 NPCFFSCGKCKIDICLQCKDG 682
>UniRef50_Q6NWY9 Cluster: PRP40 pre-mRNA processing factor 40
homolog B; n=30; Euteleostomi|Rep: PRP40 pre-mRNA
processing factor 40 homolog B - Homo sapiens (Human)
Length = 871
Score = 30.3 bits (65), Expect = 8.9
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Frame = +2
Query: 2 HEGHLQEEDQEVERTREPWSWSYRQAP*ASXXXXXXXXXAPSQNQHGQVPPWVLWQTWYE 181
H+ +EE+ + E R SWS R+ + PS Q V+ Y
Sbjct: 253 HQPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYS 312
Query: 182 KLP--HEKKQGF 211
LP EKKQ F
Sbjct: 313 ALPKLSEKKQAF 324
>UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Methanococcus maripaludis
Length = 143
Score = 30.3 bits (65), Expect = 8.9
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3
Query: 105 NAGGEHHHRINMDKYHPGYFGKLGMRNYHMRRNKDFCPVLNLDKLWTLVSEQARLTYASA 284
NAG + H +++ K++P YFGK G N++ C + L+ + E+ L Y A
Sbjct: 36 NAGHQKHKWLSVCKFNPDYFGKYGF-------NRNPCLIKQLETINIGELEEYILKYKDA 88
Query: 285 ---TDGKVPV 305
+GKV V
Sbjct: 89 FQVEEGKVVV 98
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 304,900,863
Number of Sequences: 1657284
Number of extensions: 5739393
Number of successful extensions: 18597
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 16896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18354
length of database: 575,637,011
effective HSP length: 87
effective length of database: 431,453,303
effective search space used: 10354879272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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