Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A23
         (335 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.21 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   3.5  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    20   6.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    20   8.0  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.0 bits (52), Expect = 0.21
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +3

Query: 150 HPGYFGKLGMRNYHMRRNKDFCPVLNLDKLWTLVSEQARLTYASATDGKVPVIN 311
           HP YFGK G R   ++ NK +C  + L  L   V     + YAS  +   PV N
Sbjct: 303 HPTYFGKTG-RKTVLKTNK-YCNFIILFYLSVFV---ILVYYASLDETPNPVTN 351


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 11/37 (29%), Positives = 14/37 (37%)
 Frame = -3

Query: 246 ESTVCQDLKQGRNPCFFSCGNFSYQVCQSTQGGTCPC 136
           ES +   +  GRN     CG   + V     G  C C
Sbjct: 20  ESCIAVGVGSGRNSAPSICGEHGHCVNLPGVGHRCQC 56


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 222 KQGRNPCFFSCGNF 181
           K GRN  FF  G F
Sbjct: 82  KSGRNKWFFQKGRF 95


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 294 CHLWQMHTLVL 262
           CH+ ++HT+ L
Sbjct: 114 CHICELHTIFL 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,743
Number of Sequences: 336
Number of extensions: 1597
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6579502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)