Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A23
         (335 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   1.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   1.7  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   5.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   5.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   5.3  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   5.3  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    20   7.0  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           20   7.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   9.2  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 2   HEGHLQEEDQEVERTREPWSW 64
           H GH ++ ++ V++    WSW
Sbjct: 162 HRGHRKDYERWVQQGAFGWSW 182


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 322 LLTMLITGTLPSVADAYVSLACSETRVHSLS 230
           L+  L+  TLP      V LACS   V+ +S
Sbjct: 138 LMLYLLFATLPLRLSFCVVLACSTATVYVMS 168


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 271 VSLACSETRVHSLSRF 224
           +SL C++TR++ L+ F
Sbjct: 64  LSLVCADTRLNKLAVF 79


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 111 QHYHVHQDAYGA 76
           +H H HQ  YGA
Sbjct: 19  EHPHQHQQHYGA 30


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 232 TNCGLWSLSRQ 264
           T+C LW++ RQ
Sbjct: 184 TDCQLWAIDRQ 194


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -3

Query: 117 HHQHYHV 97
           H+QHYH+
Sbjct: 7   HYQHYHI 13


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 271 VSLACSETRVHSLSRF 224
           +SL C++TR++ L+ F
Sbjct: 65  LSLLCADTRLNKLAVF 80


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 9/33 (27%), Positives = 12/33 (36%)
 Frame = -3

Query: 234 CQDLKQGRNPCFFSCGNFSYQVCQSTQGGTCPC 136
           C D   G + C   C    Y+  + T    C C
Sbjct: 103 CNDTSIGVDGCDLMCCGRGYKTQEVTVVERCAC 135


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 129 CDGAHHQHYHVHQDAYGACRYDHD 58
           C+    ++Y++ +D Y    YD D
Sbjct: 110 CNVEAEENYNLLEDIYETLSYDCD 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,940
Number of Sequences: 438
Number of extensions: 1637
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)