Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A22
(414 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 58 2e-09
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 52 1e-07
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 1e-07
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 2e-06
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 46 9e-06
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 46 1e-05
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 46 1e-05
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 45 3e-05
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 45 3e-05
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 44 4e-05
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 44 7e-05
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 9e-05
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 43 1e-04
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 42 2e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 41 5e-04
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 40 6e-04
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 40 6e-04
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 40 6e-04
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 40 8e-04
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 39 0.001
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 37 0.006
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 37 0.006
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 36 0.010
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.010
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.013
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.013
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.030
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 35 0.030
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 35 0.030
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 34 0.040
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.040
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.053
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 33 0.070
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 33 0.070
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.093
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.093
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.16
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.16
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 32 0.16
SB_56312| Best HMM Match : Calx-beta (HMM E-Value=2) 31 0.50
SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.66
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.66
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.66
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 29 2.0
SB_3847| Best HMM Match : Sec1 (HMM E-Value=8.8e-14) 29 2.0
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 29 2.0
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 4.6
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_6111| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 27 8.1
SB_20525| Best HMM Match : E1-E2_ATPase (HMM E-Value=0) 27 8.1
SB_41292| Best HMM Match : RRM_1 (HMM E-Value=0.0085) 27 8.1
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 58.4 bits (135), Expect = 2e-09
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 147 KIFVGNLS-DKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVH 323
+IF+GNL+ DK DL +F ++G V+ C + N+GFV E E+ EA+ +G +++
Sbjct: 47 RIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHANFGFVQFETEKGADEAVAKEHGRIIN 106
Query: 324 GQGIKIEAAKSR 359
G+ I + SR
Sbjct: 107 GKKIDVRIVNSR 118
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 52.4 bits (120), Expect = 1e-07
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
++++G L TT+ D+R F YG + + ++ NYGFV E+++ +A+ NG+ + G
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNNYGFVEFEDDRDADDAVYECNGKEMLG 63
Query: 327 QGIKIEAAK--SRKAPSTPT 380
+ I +E ++ +R + S P+
Sbjct: 64 ERILVEHSRGGARSSSSRPS 83
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 52.4 bits (120), Expect = 1e-07
Identities = 27/77 (35%), Positives = 42/77 (54%)
Frame = +3
Query: 126 MPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
M GT ++FVG LS +T DL +F YG ++ CD+ YGF+ E+ + EA++
Sbjct: 1 MASRGT-QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKTAYGFIEYEDPRDAEEAMRRE 59
Query: 306 NGELVHGQGIKIEAAKS 356
N + G I +E +S
Sbjct: 60 NNRKLFGSRIVVEYVRS 76
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 48.4 bits (110), Expect = 2e-06
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Frame = +3
Query: 120 TKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENE 275
TK G ++V NLS T ADL+ F +YG VV IV N +G V M
Sbjct: 341 TKDKKEGGKSLWVANLSSITRAADLKTRFSQYGKVVGAKIVTNSKAPGAQCFGLVTMTTS 400
Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPST--PTTKIFVGNLTDK 413
+ + IQ+L+ +HG+ I ++ AK + T +K G DK
Sbjct: 401 EEAAKCIQHLHRTELHGRAITVDRAKGDRVSQTQGSASKKTPGKAADK 448
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 46.4 bits (105), Expect = 9e-06
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 8/79 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 305
+FVGN+ + ++ L+ +F + G V+ +V + YGF ++++ A++NL
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNL 86
Query: 306 NGELVHGQGIKIEAAKSRK 362
NG ++G+ +++++A S K
Sbjct: 87 NGYELNGRALRVDSAASEK 105
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 46.0 bits (104), Expect = 1e-05
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +3
Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN---YGFVHMENEQVGREAIQNLNG 311
T K++VGNL ++L FEK+G + + + RN + FV E+ + EA++ L+G
Sbjct: 3 TTKLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVRELDG 62
Query: 312 ELVHGQGIKIEAAKSR 359
V + I++E + +R
Sbjct: 63 ANVCDRTIRVEFSNNR 78
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 46.0 bits (104), Expect = 1e-05
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Frame = +3
Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVV--------ECDIVRNYGFVHMENEQVG 284
PG +F+ +L + TDADL F+ +GTV+ + ++ + +GFV +N
Sbjct: 272 PGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSA 331
Query: 285 REAIQNLNGELVHGQGIKIEAAKSRKA 365
+ AIQ++NG + + +K++ + + A
Sbjct: 332 QNAIQHMNGFQIGAKRLKVQLKRPKDA 358
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 44.8 bits (101), Expect = 3e-05
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Frame = +3
Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN-----YGFVHMENEQVGREA 293
PG T +FVGN+ TT DL+ FE+YG V++ DI + Y FV +A
Sbjct: 245 PGC-TRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPGNNPYAFVQFAELSSAIQA 303
Query: 294 IQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTD 410
+ ++ E V +K+ K P I+VG +T+
Sbjct: 304 RRKMDREYVGRNRVKVGFGK-----VNPINTIWVGGVTN 337
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Frame = +3
Query: 105 AADVETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFV 260
AA+ E G +++VG+L T+A ++ +FE +GTV ++ + YGFV
Sbjct: 229 AAEAERLKQPLGPTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFV 288
Query: 261 HMENEQVGREAIQNLNGELVHGQGIKIEAAKSR 359
+ + A++ +NG + G+ +KI R
Sbjct: 289 QFREAEAAKRAMEQMNGFELAGRPLKIGPVTER 321
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 329
I+V N+ ++ L+ +F KYG + + +R+YGFV+ + +AI +NG + G
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRDYGFVYFAKRESAVQAIDGINGAYIDGC 63
Query: 330 GIKIEAA 350
+++ A
Sbjct: 64 KLEVSLA 70
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 44.0 bits (99), Expect = 5e-05
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Frame = +3
Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVGREAIQ 299
T +FVGNL + DLR FEK+G V++ DI R Y FV + V +A
Sbjct: 236 TRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKRPARGQGNTYAFVKFADLDVAAKAKC 295
Query: 300 NLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
+ G+ + IKI +S++ TT+++VG L
Sbjct: 296 AMQGQCIGRNHIKIGYGRSQQ-----TTRLWVGGL 325
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 43.6 bits (98), Expect = 7e-05
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLN 308
KIF+G L+ TT+ L+ F ++GT+V+C I+ R +GFV E+ E ++
Sbjct: 51 KIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRDGRSRGFGFVTYESSDSVNEVLKK-K 109
Query: 309 GELVHGQGIKIEAAKSRKAPSTP-----TTKIFVGNL 404
++ + I+ + + R P T KIFVG L
Sbjct: 110 DHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGL 146
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 43.2 bits (97), Expect = 9e-05
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 15/103 (14%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYG----TVVECDIV----RNYGFVHMENEQVGREAIQN 302
K+FVG L+ +TT+ LR FE YG VV CD R +G+V + +V R +++
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKD 74
Query: 303 L--NG-ELVHGQGIKIEAAKSRKAPST----PTTKIFVGNLTD 410
NG + G+ ++++ A R S T KIFVG L +
Sbjct: 75 KVENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPE 117
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 42.7 bits (96), Expect = 1e-04
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = +3
Query: 183 DADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQGIKIEAAKSRK 362
++D+ YG + + + R YGFV ++ + +A+ +LNG + G+ + +E +K R+
Sbjct: 702 ESDVEKFLRGYGKIRDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFSKGRR 761
Query: 363 A 365
+
Sbjct: 762 S 762
Score = 35.9 bits (79), Expect = 0.013
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVR---NYGFVHMENEQVGREAIQ 299
P + + V NLS +T+ DL+ F KYG V D + G V E++ AI+
Sbjct: 793 PVRTNYSVIVENLSSRTSWQDLKDYFRKYGKVTYADAHKKRIGEGVVEFESKDDLNTAIE 852
Query: 300 NLNGELVHGQGIKI 341
L+ + G+ I++
Sbjct: 853 KLDDTELGGRRIRV 866
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/73 (28%), Positives = 40/73 (54%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 329
+++ NLS T+ L+ + +YG V +++Y FVH +AI+ +G+ +
Sbjct: 331 VYLRNLSPSITEEKLKEEYSQYGAVDRVKKLKDYAFVHFTERDHALKAIEETDGKEM--D 388
Query: 330 GIKIEAAKSRKAP 368
G+KIEA+ ++ P
Sbjct: 389 GLKIEASLAKPQP 401
Score = 31.9 bits (69), Expect = 0.21
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 16/106 (15%)
Frame = +3
Query: 117 ETKMPGAGTFKI----FVGNLSDKTTDADLRPLFEKYGTVVE--------CDIVRNYGFV 260
E K PG G+ K+ F+G + + +L P+FE+ G + + + + + F
Sbjct: 139 EGKPPGTGSEKVCSQVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFC 198
Query: 261 HMENEQVGREAIQNL-NGELVHGQ--GIKIEAAKSRK-APSTPTTK 386
N+ + A++ L N E+ G+ G+ I A SR S P TK
Sbjct: 199 TFSNKDEAQNAVKKLDNKEIRPGKRLGVCISVANSRLFVGSIPKTK 244
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
+FV L+ TTD DL +F ++GT++ C+++R+ Y F+ E ++ A +
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181
Query: 306 NGELVHGQGIKIEAAKS 356
+ L+ + I ++ ++S
Sbjct: 182 DNVLIDDRRIHVDFSQS 198
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 302
K ++GNL K +ADL+ F +Y VV+ ++ R + FV +++ +AI
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINE 289
Query: 303 LNGELVHGQGIKIEAAKSRK 362
L+G+ G+ +K+ A+SR+
Sbjct: 290 LDGQEFDGRSMKVNQARSRE 309
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 243 RNYGFVHMENEQVGREAIQNLNGELVHGQGIKIEAAKSR 359
R +GFV +E +AI +GE + G+ +K+ A+ R
Sbjct: 50 RGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPR 88
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN---YGFVHMENEQVGREAIQNLNGEL 317
K+++G+L D + ++ F YG + + + RN + F ++ + +A++ L+G
Sbjct: 33 KVYIGSLGDNASKREIENEFGYYGPLKDVWVARNPPGFAFCIFDDRRDAEDAVRELDGRY 92
Query: 318 VHGQGIKIEAAK 353
+ GQ +++E AK
Sbjct: 93 ICGQRVRVELAK 104
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
++VGNL T++DL +FE+YG VV+ I+R+ F+ + Q + A+ +
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAV 71
Query: 306 NGELVHGQGIKIEAAKSR-KAP 368
N + + G+ IK AK +AP
Sbjct: 72 NKKQMFGRTIKCTIAKDNGRAP 93
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 41.1 bits (92), Expect = 4e-04
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTV--VECDIVRNYGFVHMENEQVGREAIQNLNGELVH 323
IFV L + T L LF YG + +E + + YGFV+M N + AI LNG H
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIELKLDKGYGFVNMSNYEEACHAICCLNGTPQH 333
Query: 324 GQ 329
G+
Sbjct: 334 GK 335
Score = 33.5 bits (73), Expect = 0.070
Identities = 15/76 (19%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
+ + + + D++ +F G V C ++R+ Y FV+ +N +A++ +
Sbjct: 29 LIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREM 88
Query: 306 NGELVHGQGIKIEAAK 353
NG + + +K+ A+
Sbjct: 89 NGARLQNKTLKVSFAR 104
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 40.7 bits (91), Expect = 5e-04
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV--RNYGFVHMENEQVGREAIQNLNGELVH 323
I+VG+L+ T L+ +FE++GT+ D++ R ++ ME + A+ L ++
Sbjct: 543 IWVGHLAKIVTQDTLQGIFEEHGTITSIDLIPPRGCAYIQMEKREDAYRALDKLRNIKLY 602
Query: 324 GQGIKIEAAKSR 359
G +K+ A ++
Sbjct: 603 GNSVKLAWAPAK 614
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 40.3 bits (90), Expect = 6e-04
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
I+VG L +K ++A + LF + G VV + ++ YGFV E+ AI+ +
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVM 74
Query: 306 NGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
N V+G+ I++ A + +F+GNL
Sbjct: 75 NMIKVYGKPIRVNKASAHNKNLDVGANLFIGNL 107
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 40.3 bits (90), Expect = 6e-04
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG------FVHMENEQVGREAIQNLN 308
+++VGNL + DL +F KYG + + D+ G FV E+ + +A++ +
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGRD 321
Query: 309 GELVHGQGIKIE 344
G G I++E
Sbjct: 322 GHEFDGYRIRVE 333
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 40.3 bits (90), Expect = 6e-04
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 302
+I++ ++ + D++ +FE +G VV C + + YGF+ EN+Q +AI +
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIAS 259
Query: 303 LNGELVHGQGIKIEAA 350
+N + GQ +++ A
Sbjct: 260 MNLFDLGGQFLRVGRA 275
Score = 32.7 bits (71), Expect = 0.12
Identities = 15/73 (20%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 302
+++VG+++ + + +R F +G + + D+ + + FV + + + A++
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQ 162
Query: 303 LNGELVHGQGIKI 341
+NG L+ G+ IK+
Sbjct: 163 MNGVLLGGRNIKV 175
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 39.9 bits (89), Expect = 8e-04
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Frame = +3
Query: 135 AGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNY-------GFVHMENEQVGREA 293
A +F +++G LS+ T+ L LF K+G V + I+R+ GFVH + V A
Sbjct: 521 AASFPVWIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQSGFVHFWSSDVAEAA 580
Query: 294 IQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFV 395
+NG + G KI K K +T +K+ V
Sbjct: 581 NVGMNGCDILG---KIVETKYAKEVTTNYSKVHV 611
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 39.5 bits (88), Expect = 0.001
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Frame = +3
Query: 117 ETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYG-TVVECDIV---------------RN 248
+ KM A K++ GNL K T +L+ +FE TV + IV R
Sbjct: 41 DQKMVFADPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRG 100
Query: 249 YGFVHMENEQVGREAIQNLNGELVHGQGIKIEAAKSR 359
+GFV N + + A+++LNG+ V G+ +KI + SR
Sbjct: 101 FGFVTFANPEDAQTAVKSLNGKEVQGRTLKIAPSISR 137
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGREAIQNL 305
+IFV + +TT+++LR FE+YG V E IVR+ Y F+ E+++V + +++
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFESQEVA-DGLRDN 67
Query: 306 NGELVHGQGIKIEAAKSRKA 365
G + + I A RK+
Sbjct: 68 KGLDFKDKVLSIGQAVRRKS 87
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
++V N+ + +A+ R FE YG +V C ++R+ GFV + + + AI +L
Sbjct: 135 LYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAAISSL 194
Query: 306 NGELVHG--QGIKIEAAKSRKAPSTPTTKI 389
+G G G++I A A P +
Sbjct: 195 SGTFFPGSTMGLQIRYADDNSAKVRPPNNV 224
Score = 32.3 bits (70), Expect = 0.16
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
+ V + TD R +FE ++ C IVR+ +GFV + ++AI L
Sbjct: 49 LIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKL 108
Query: 306 NGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
NG + + +K+ A +T ++V N+
Sbjct: 109 NGFTIGNKVLKV-AFSRPGGDNTKGANLYVCNI 140
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 37.5 bits (83), Expect = 0.004
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +3
Query: 126 MPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGR 287
+P +F+GNLS + L FE+ G C ++ R +G+ +++
Sbjct: 174 VPAKEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVITQEGRSRGFGYADFTSKEDYN 233
Query: 288 EAIQNLNGELVHGQGIKIEAAKSR 359
+A++ LNGE G+ I+I A S+
Sbjct: 234 KALE-LNGEDCCGREIRINPANSK 256
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 120 TKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN-YGFVHMENEQV 281
T + + + K+FVG + + DLRP+FE YG + E I+++ Y H ++ ++
Sbjct: 162 TSVRDSNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKDDRKL 216
Score = 35.5 bits (78), Expect = 0.017
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
K+FVG +S + DLR +F +GT+ E ++RN
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN 248
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 37.1 bits (82), Expect = 0.006
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +3
Query: 156 VGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQGI 335
V LS TT+ DLRP+FEKYG V IV ++ +A + G + G+ I
Sbjct: 185 VFGLSLYTTERDLRPVFEKYGPVEAIQIVYDH------------QAKERTTGIELDGRRI 232
Query: 336 KIEAAKSRKAPSTPTTKIFVG 398
+++ + +++A TPT +++G
Sbjct: 233 RVDYSVTKRA-HTPTPGVYMG 252
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 36.3 bits (80), Expect = 0.010
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVE 230
++F+GNL DAD+ +F KYGT++E
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILE 385
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 36.3 bits (80), Expect = 0.010
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGREAIQNLN 308
+++ NL D D LR F YGT+ ++++ +GFV + + +A+ +N
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMN 273
Query: 309 GELVHGQGIKIEAAKSRK 362
G ++ + + + A+ R+
Sbjct: 274 GRILISKPLYVALAQRRE 291
Score = 34.7 bits (76), Expect = 0.030
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 308
++V N D D ++ + + G +V ++ + +GFV E + EA+ LN
Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLN 170
Query: 309 GELVHGQGIKIEAAKSR 359
G+ + G+ + AK R
Sbjct: 171 GKEIGGRRLWAGRAKKR 187
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 35.9 bits (79), Expect = 0.013
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGREAIQNLN 308
+FV NL ++++ LF K+G V + +V N YG+V E E A+ L+
Sbjct: 173 LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAVLTLD 232
Query: 309 GELVHGQGIKIEAAK--SRKAP 368
V G+ I + + +R+ P
Sbjct: 233 KTEVKGRTISVALSNPPTRRGP 254
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 35.9 bits (79), Expect = 0.013
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTV----VECD----IVRNYGFVHMENEQVGREAIQNL 305
+FV N+ ++ + D+ LF YG + V D ++ Y V E + + A++ L
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 306 NGELVHGQGIKIEAA 350
NG + GQ I ++ A
Sbjct: 355 NGAEMLGQNISVDWA 369
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 35.5 bits (78), Expect = 0.017
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQN 302
K+++GNL+ + + ++ FE++G V + DI+R+ +GFV +++ AI+
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEK 68
Query: 303 LNGELVHGQGIKIEAA 350
+N V G+ I + A
Sbjct: 69 MNQSSVGGRNITVALA 84
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 35.5 bits (78), Expect = 0.017
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +3
Query: 138 GTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDI--VRNYGFVHMENEQVGREAIQNLNG 311
G ++FVGNL D + +++ +F+KYG V E I + +GF+ ++ A L+
Sbjct: 51 GRCRLFVGNLID-CDEEEMKEMFKKYGEVAEVFINKEKGFGFIRLDTRLHAEAAKAGLDM 109
Query: 312 ELVHGQGIKIEAA 350
G+ +++ A
Sbjct: 110 ATRKGRTLRVRFA 122
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 34.7 bits (76), Expect = 0.030
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
+++ G L + DL YG V E + YGFV ++ + + + +LNG + G
Sbjct: 6 RVYFGRLPRDCRERDLEKFVRGYGRVREISMKLGYGFVEFDDYRDADDCVYDLNGRNLLG 65
Query: 327 Q 329
+
Sbjct: 66 E 66
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 34.7 bits (76), Expect = 0.030
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDI 239
K+FVG LS +TT L+ F KYG +V DI
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDI 60
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 123 KMPGAGTFKIFVGNLSDKTTDADLRPLFEK-YGTVVECDIVRNY 251
K P KIFVG L +T+D +R F K Y V E + + +
Sbjct: 96 KPPHLRVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEH 139
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 34.7 bits (76), Expect = 0.030
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 308
+FVG L+ T + L+ FE++G V I+ RNYGFV +++ +E ++
Sbjct: 82 VFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGYSRNYGFVLFKDDGPSKEVLK--K 139
Query: 309 GELVHGQGIKIEAAKSR 359
+++G+ ++ KSR
Sbjct: 140 SHVINGK--TVDVGKSR 154
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV 242
+FV NLS+ T + D+ F YG V + I+
Sbjct: 321 LFVDNLSEDTKELDVLRYFRPYGQVAKVHIL 351
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 34.3 bits (75), Expect = 0.040
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVV--------ECDIVRNYGFVHMENEQVGREAIQNL 305
+++ L TTD DL L KYGT++ + ++ + YGFV E+ ++A+
Sbjct: 102 LYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAV--- 158
Query: 306 NGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
LV+ +GI+ + AK ++ T +++ NL
Sbjct: 159 -AALVN-KGIQAQMAKQQE---QDPTNLYIQNL 186
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 34.3 bits (75), Expect = 0.040
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNG 311
++VGNL K T + +F K VV C ++ + Y FV E +EA ++
Sbjct: 371 LYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETHADAQEAKFRMDQ 430
Query: 312 ELVHGQGIKIEAAKSRKAPSTPTTK----IFVGNLTD 410
V + +K+ A + T IFVG+L +
Sbjct: 431 RTVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAE 467
Score = 34.3 bits (75), Expect = 0.040
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV--RNYGFVHMENEQ 278
++VGNL D +L+ +F +YG+++E + + Y F++ E+
Sbjct: 617 VYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFINARGEK 661
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 33.9 bits (74), Expect = 0.053
Identities = 21/105 (20%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Frame = +3
Query: 120 TKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDI--------VRNYGFVHMENE 275
TK+ G + V L TT+++++ F ++G + C++ R +GFV + +
Sbjct: 107 TKVEGVDVGDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKD 166
Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTD 410
+ + + + G+ ++ + ++ + P K+FVG L +
Sbjct: 167 EDAKNVLS--TSHRIQGRLCEVRLPRPKEELNVP-KKLFVGRLPE 208
Score = 31.5 bits (68), Expect = 0.28
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDI---VRNYGFV 260
K+FVG L + TT+ L F ++G V + I R++GFV
Sbjct: 200 KLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPKPFRHFGFV 240
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 33.5 bits (73), Expect = 0.070
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +3
Query: 153 FVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLN 308
+VG L+++ + L F +G + + I R +GFV E + AI N+N
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 309 GELVHGQGIKIEAAKSRK 362
+ G+ I++ AK K
Sbjct: 68 ESELFGRTIRVNLAKPMK 85
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 33.5 bits (73), Expect = 0.070
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Frame = +3
Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQ 299
F+IF G+L + TD L F KY + ++ IVR+ YGFV ++ +A++
Sbjct: 217 FRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMR 276
Query: 300 NLN 308
+N
Sbjct: 277 EMN 279
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 33.1 bits (72), Expect = 0.093
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 183 DADLRPLFEKYGTVVECDIV--RNYGFVHMENEQVGREAIQNLNGELVHGQGIKIE 344
D L+ +F ++G +++ ++ RN+G+ +Q AIQ L+G V G +KI+
Sbjct: 351 DHVLKDVFSRFGNLIDVWMMKERNFGYAKFAAKQSADAAIQGLHGHDVLGMKLKID 406
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 33.1 bits (72), Expect = 0.093
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV--RNYGFVHMENEQVGREAI-QNLNGELV 320
++VG L K T+ DLR F ++G + +V +N FV + A ++ N ++
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNCAFVCFTSRAAAEAAADRSFNKLIL 365
Query: 321 HGQGIKIEAAKSRKAPSTP 377
G+ +KI KS+ P
Sbjct: 366 KGRRLKIMWGKSQGQQPAP 384
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 32.3 bits (70), Expect = 0.16
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDI 239
PG +F+ +L + TDADL F+ +GTV+ +
Sbjct: 224 PGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKV 260
Score = 30.3 bits (65), Expect = 0.66
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +3
Query: 192 LRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGELVHGQGIKIEA 347
L F+ +GTV+ + + +GFV +N + AIQ++NG + + +K++
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQL 337
Query: 348 AKSRKA 365
+ + A
Sbjct: 338 KRPKDA 343
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 32.3 bits (70), Expect = 0.16
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDI------------VRNYGFVHMEN-EQVGR 287
K+FVG L++ TT+ +R F+ + E D+ R + FV N +
Sbjct: 9 KLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPEGKSRKFCFVEFSNGSDIID 68
Query: 288 EAIQNLNGELVHGQGIKIEAAKSRKAPS----TPTTKIFVGNLTDK 413
+ N + + ++++ A R P+ T K+F+G L D+
Sbjct: 69 NIVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGLKDE 114
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 32.3 bits (70), Expect = 0.16
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGT--VVECDIVRNYGFVHMENEQVGREAIQNLNGELV 320
++++G L T + D++ F YG + E + YGFV + +A+ NG+ +
Sbjct: 4 RVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKDGYGFVEFDYSDDAEDAVYECNGKKM 63
Query: 321 HGQ 329
G+
Sbjct: 64 LGE 66
>SB_56312| Best HMM Match : Calx-beta (HMM E-Value=2)
Length = 311
Score = 30.7 bits (66), Expect = 0.50
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = -2
Query: 266 HVDETVISDDIAFYDRTVLFE*RSKISVCRFIG*VPDEDFESTGARHFSFDVSS*HRNVN 87
H+D TV D I + TVL RS IS C + +ED + F +SS + NV
Sbjct: 148 HIDTTVGRDFIPLTNFTVLIPYRSSIS-CFTV--TIEEDHVTELDESFGISLSSDYMNVT 204
Query: 86 TNENK 72
+EN+
Sbjct: 205 VDENR 209
>SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 30.3 bits (65), Expect = 0.66
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +3
Query: 105 AADVETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--YGFVHMENEQ 278
A ++ K+ +G +FV + T+ L+ F G V + +N GFV + +
Sbjct: 97 AKEIAKKLIASGGKTVFVSGIG--LTEEILKEEFNHLGHVERVNFEKNRSQGFVTFDTWE 154
Query: 279 VGREAIQNLNGELVHGQGIKIEAAKSRKAPS 371
+AI +NG V Q + I + +R+ P+
Sbjct: 155 AADKAIDEMNGLKV--QHVHIRVSMARRQPN 183
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 30.3 bits (65), Expect = 0.66
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVH---MENEQVGREAI 296
+FVGNL + T+ L YG + +VR+ YGFV EN ++ +
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 297 QNLNGELVHGQGIKIEAAKS 356
N + + G+ +++ A+S
Sbjct: 175 LNTASKYIGGRILRVAFAES 194
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 30.3 bits (65), Expect = 0.66
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTV 224
K+F+G L+ TT+ DL+ F YG V
Sbjct: 203 KVFIGGLAFGTTEEDLKEYFSTYGMV 228
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 28.7 bits (61), Expect = 2.0
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
+F+GNL + LR LF G V ++R+ +G+V E++ A++
Sbjct: 58 VFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMN 117
Query: 306 NGELVHGQGIKIEAAKSRKAPST 374
N E +G KI S+ P T
Sbjct: 118 NAEF---KGRKIRVFPSKDKPQT 137
>SB_3847| Best HMM Match : Sec1 (HMM E-Value=8.8e-14)
Length = 605
Score = 28.7 bits (61), Expect = 2.0
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 16 VVDLRLRVAWKLYR*ILCYLFSLVFTFLC*LLTSKLKCRAPVLSKSSSGTYPIKR 180
+V L + W L R Y+FSLV L L +S L+ RA V + S+GT + R
Sbjct: 471 IVHLVAQYDW-LSREFRQYMFSLVRYSLLILTSSDLRLRASVQNTDSTGTVGLLR 524
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 138 GTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
G + V NL+ +TT DL+ +F+KYG + + I R+
Sbjct: 14 GMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRD 50
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 28.7 bits (61), Expect = 2.0
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Frame = +3
Query: 120 TKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV---------RNYGFVHMEN 272
+K P IFV NL TDA+ + FE+ G + IV R +G+V
Sbjct: 12 SKTPVISKTTIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFAL 71
Query: 273 EQVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTP 377
E+ +A N+ + G+ I ++ ++ +KA + P
Sbjct: 72 EEDALKAKDNIKS--IKGRPIHLDFSE-KKARTKP 103
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV 242
+F+ NLS +T ++ LF+++G + C +V
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVV 448
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIV 242
K+FVGN+ K +L+ F +G VV I+
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQII 111
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 27.9 bits (59), Expect = 3.5
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = +3
Query: 243 RNYGFVHMENEQVGREAIQNLNGEL-----VHGQGIKIEAAKSRKA 365
RN+G+V +EQ +A++ + GE + G+ + IE A+ +++
Sbjct: 17 RNFGYVTFRDEQDAADAMKQMGGESGKGKEIFGRALNIEYAQEKES 62
>SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1572
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 201 LFEKYGTVVECDIV--RNYGFVHMENEQVGREAIQNLNGELVHGQGIK 338
+F YGT+ ++ R+Y FV ++ A++NLNG+ + G++
Sbjct: 69 VFSLYGTLERVVMLPQRSYSFVSYKSHNNALNAMRNLNGKALDEFGLR 116
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 27.1 bits (57), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
+ + NL + DL+ L + YG V+ C+I R+
Sbjct: 121 LIIQNLPKGIQEKDLKELLQLYGNVLVCNIERD 153
>SB_6111| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 406 VRLPTNILVVGVEGAFLLFAASILIPC 326
+R TNILV+G+ A +L A I IPC
Sbjct: 50 LRCVTNILVIGLSAADILVGA-ISIPC 75
>SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1490
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 306 NGELVHGQGIKIEAAKSRKAPSTP 377
+G+L I+ EAAK RK PSTP
Sbjct: 1119 DGKLTKSSNIQ-EAAKDRKGPSTP 1141
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 26.6 bits (56), Expect = 8.1
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNL 305
++FVG + + +L P+FE G + E ++ R Y FV ++ + ++ L
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFNGQNRGYAFVVYTSKDDAKRCVKTL 134
Query: 306 NG-ELVHGQGIKI 341
N E+ G+ I +
Sbjct: 135 NNYEIRKGKCIGV 147
>SB_20525| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)
Length = 1145
Score = 26.6 bits (56), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 9 PFCCRSETACCVEII 53
P CC SE CC E+I
Sbjct: 326 PSCCSSEEECCDEVI 340
>SB_41292| Best HMM Match : RRM_1 (HMM E-Value=0.0085)
Length = 292
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 249 YGFVHMENEQVGREAIQNLNGE-LVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTD 410
Y FV + + A + +NG+ L+ G +K++ A SRK PS + +++ +
Sbjct: 80 YAFVKFYSAKAALRAKEEVNGKWLIDGNILKVQFA-SRKKPSGVPSPLYMAKCVE 133
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,829,724
Number of Sequences: 59808
Number of extensions: 194381
Number of successful extensions: 556
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 764823134
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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