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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A22
         (414 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78019-5|CAB01455.1|  305|Caenorhabditis elegans Hypothetical pr...    62   2e-10
U21302-2|AAA92287.1|  305|Caenorhabditis elegans RNP-1 protein.        62   2e-10
Z78536-3|CAB01717.2|  360|Caenorhabditis elegans Hypothetical pr...    60   5e-10
U41531-7|AAA83161.2|  415|Caenorhabditis elegans Feminizing gene...    54   5e-08
U14946-1|AAA67723.1|  415|Caenorhabditis elegans ribonucleoprote...    54   5e-08
U23172-15|AAN63408.1|  374|Caenorhabditis elegans Hypothetical p...    49   1e-06
U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical p...    49   1e-06
Z66521-4|CAD59160.1|  150|Caenorhabditis elegans Hypothetical pr...    48   4e-06
Z66521-3|CAD59159.1|  148|Caenorhabditis elegans Hypothetical pr...    48   4e-06
Z66521-2|CAA91395.1|  312|Caenorhabditis elegans Hypothetical pr...    48   4e-06
U24123-1|AAA65224.1|  646|Caenorhabditis elegans polyadenylate-b...    48   4e-06
AL032631-3|CAE54916.1|  583|Caenorhabditis elegans Hypothetical ...    48   4e-06
AL032631-2|CAA21572.1|  646|Caenorhabditis elegans Hypothetical ...    48   4e-06
Z36238-3|CAA85276.1|  404|Caenorhabditis elegans Hypothetical pr...    45   2e-05
DQ485531-1|ABF22491.1|  404|Caenorhabditis elegans RNA-binding p...    45   2e-05
Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical pr...    44   3e-05
Z66521-8|CAA91394.1|  281|Caenorhabditis elegans Hypothetical pr...    44   3e-05
U23484-3|AAK68298.1|  126|Caenorhabditis elegans Sr protein (spl...    43   8e-05
U23484-2|AAC46767.1|  196|Caenorhabditis elegans Sr protein (spl...    43   8e-05
AL032631-4|CAE54917.1|  586|Caenorhabditis elegans Hypothetical ...    43   8e-05
Z49910-5|CAA90120.1|  411|Caenorhabditis elegans Hypothetical pr...    42   1e-04
U80455-1|AAB37881.1|  584|Caenorhabditis elegans Elav-type rna b...    42   2e-04
U53931-1|AAA98566.1|  584|Caenorhabditis elegans elav-type ribon...    42   2e-04
EF523770-1|ABS18836.1|  513|Caenorhabditis elegans ELAV-type RNA...    42   2e-04
EF523769-1|ABS18835.1|  327|Caenorhabditis elegans ELAV-type RNA...    42   2e-04
EF523768-1|ABS18834.1|  378|Caenorhabditis elegans ELAV-type RNA...    42   2e-04
EF523767-1|ABS18833.1|  193|Caenorhabditis elegans ELAV-type RNA...    42   2e-04
EF523766-1|ABS18832.1|  584|Caenorhabditis elegans ELAV-type RNA...    42   2e-04
Z36752-6|CAA85327.1|  456|Caenorhabditis elegans Hypothetical pr...    42   2e-04
Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical pr...    41   3e-04
Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical pr...    41   3e-04
U28944-7|AAN63457.1|  295|Caenorhabditis elegans Hypothetical pr...    41   3e-04
U28944-6|AAN63456.1|  305|Caenorhabditis elegans Hypothetical pr...    41   3e-04
U28944-5|AAK68191.1|  408|Caenorhabditis elegans Hypothetical pr...    41   3e-04
U28944-4|AAK68192.1|  376|Caenorhabditis elegans Hypothetical pr...    41   3e-04
Z81108-4|CAB03237.1|   85|Caenorhabditis elegans Hypothetical pr...    41   4e-04
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    41   4e-04
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    41   4e-04
Z97628-2|CAB10726.2|  427|Caenorhabditis elegans Hypothetical pr...    40   5e-04
Z81080-5|CAB03088.2|  427|Caenorhabditis elegans Hypothetical pr...    40   5e-04
Z81080-2|CAD56584.1|  358|Caenorhabditis elegans Hypothetical pr...    40   5e-04
AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical ...    40   7e-04
Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical pr...    39   0.001
AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical...    39   0.001
AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.        39   0.001
Z81108-1|CAB03236.1|   83|Caenorhabditis elegans Hypothetical pr...    38   0.002
AL110485-8|CAB60356.1|  434|Caenorhabditis elegans Hypothetical ...    38   0.002
AC084197-11|AAM44397.1|  305|Caenorhabditis elegans Homologous t...    38   0.003
AC084197-10|AAY43984.1|  308|Caenorhabditis elegans Homologous t...    38   0.003
AF047662-1|AAC04442.1|  248|Caenorhabditis elegans Suppressor pr...    38   0.004
U23450-2|AAK31468.1|  302|Caenorhabditis elegans Hypothetical pr...    37   0.005
AC024791-22|AAF60676.1|  339|Caenorhabditis elegans Rnp (rrm rna...    37   0.005
AC024791-21|AAF60666.1|  749|Caenorhabditis elegans Rnp (rrm rna...    37   0.005
AC024791-23|AAM81102.1|  346|Caenorhabditis elegans Rnp (rrm rna...    36   0.012
Z36238-4|CAD82915.1|  286|Caenorhabditis elegans Hypothetical pr...    36   0.015
Z35601-1|CAA84667.2|  320|Caenorhabditis elegans Hypothetical pr...    36   0.015
AB036738-1|BAB13470.1|  320|Caenorhabditis elegans neural RNA-bi...    36   0.015
Z32683-11|CAA83626.1|  142|Caenorhabditis elegans Hypothetical p...    35   0.020
U23172-14|AAL02495.1|  165|Caenorhabditis elegans Hypothetical p...    35   0.027
U00052-10|AAK21429.2|  289|Caenorhabditis elegans Rnp (rrm rna b...    35   0.027
AL117204-22|CAB55151.1|  331|Caenorhabditis elegans Hypothetical...    35   0.027
AF098501-6|AAL38960.1|  315|Caenorhabditis elegans Hypothetical ...    35   0.027
AF098501-5|AAM69104.1|  335|Caenorhabditis elegans Hypothetical ...    35   0.027
AF098501-4|AAL38959.1|  336|Caenorhabditis elegans Hypothetical ...    35   0.027
AC024818-2|AAF60781.1|  302|Caenorhabditis elegans Temporarily a...    35   0.027
U39997-3|AAK68389.1|  498|Caenorhabditis elegans Human daz (dele...    34   0.035
AB025253-1|BAA88577.1|  499|Caenorhabditis elegans DAZ-1 protein.      34   0.035
U21320-5|AAA62536.2|  332|Caenorhabditis elegans Rnp (rrm rna bi...    33   0.082
U80455-2|AAB37882.2|  420|Caenorhabditis elegans Elav-type rna b...    33   0.11 
AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical ...    33   0.11 
Z81473-3|CAB03896.4|  514|Caenorhabditis elegans Hypothetical pr...    32   0.14 
U23484-7|ABB88232.1|  738|Caenorhabditis elegans Hypothetical pr...    32   0.14 
AY342388-1|AAQ19851.1|  514|Caenorhabditis elegans putative RNA-...    32   0.14 
Z73102-13|CAA97405.1|  836|Caenorhabditis elegans Hypothetical p...    32   0.19 
D10877-1|BAA01645.1|  346|Caenorhabditis elegans hnRNP like prot...    32   0.19 
AF038613-6|ABB51186.1|  347|Caenorhabditis elegans Human hnrnp a...    32   0.19 
AF038613-5|AAB92051.1|  346|Caenorhabditis elegans Human hnrnp a...    32   0.19 
Z83127-4|CAB05631.1|  872|Caenorhabditis elegans Hypothetical pr...    31   0.25 
AF067616-7|AAM98029.1|  423|Caenorhabditis elegans Hypothetical ...    31   0.25 
AF067616-6|AAC19192.1|  520|Caenorhabditis elegans Hypothetical ...    31   0.25 
AF067616-5|AAU05574.1|  497|Caenorhabditis elegans Hypothetical ...    31   0.25 
Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical pr...    29   1.8  
AF016452-14|AAB66020.1|  409|Caenorhabditis elegans Hypothetical...    28   2.3  
Z81120-1|CAB03342.1|  207|Caenorhabditis elegans Hypothetical pr...    27   4.1  
AF100307-1|ABB88211.1|  317|Caenorhabditis elegans Hypothetical ...    27   4.1  
Z77669-6|CAB01243.2|  371|Caenorhabditis elegans Hypothetical pr...    27   7.1  
Z81084-7|CAB03111.1|  312|Caenorhabditis elegans Hypothetical pr...    26   9.4  
Z81037-10|CAB02754.1|  312|Caenorhabditis elegans Hypothetical p...    26   9.4  
X95609-1|CAA64867.1|  312|Caenorhabditis elegans mec-8 protein.        26   9.4  
X95608-1|CAA64866.1|  312|Caenorhabditis elegans mec-8 protein.        26   9.4  
U80439-6|AAB37642.1|  564|Caenorhabditis elegans Ezrin/radixin/m...    26   9.4  
U80439-5|AAB37643.1|  563|Caenorhabditis elegans Ezrin/radixin/m...    26   9.4  
AY643539-1|AAT66915.1|  566|Caenorhabditis elegans ERM-1C protein.     26   9.4  
AY643538-1|AAT66914.1|  563|Caenorhabditis elegans ERM-1A protein.     26   9.4  
AB107270-3|BAC98358.1|  564|Caenorhabditis elegans ERM-1B protein.     26   9.4  
AB107270-2|BAC98357.1|  566|Caenorhabditis elegans ERM-1Asv prot...    26   9.4  
AB107270-1|BAC98356.1|  563|Caenorhabditis elegans ERM-1A protein.     26   9.4  
AB107269-1|BAC98355.1|  564|Caenorhabditis elegans ERM-1B protein.     26   9.4  
AB107268-1|BAC98354.1|  563|Caenorhabditis elegans ERM-1A protein.     26   9.4  

>Z78019-5|CAB01455.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK863.7 protein.
          Length = 305

 Score = 61.7 bits (143), Expect = 2e-10
 Identities = 29/75 (38%), Positives = 44/75 (58%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
           K+FVGNL D      L+ +F+ +  V ECDIV+NY FVH+E + V    I  L G  + G
Sbjct: 4   KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62

Query: 327 QGIKIEAAKSRKAPS 371
           + + I+ + S+  P+
Sbjct: 63  KVVNIKKSTSKLRPT 77


>U21302-2|AAA92287.1|  305|Caenorhabditis elegans RNP-1 protein.
          Length = 305

 Score = 61.7 bits (143), Expect = 2e-10
 Identities = 29/75 (38%), Positives = 44/75 (58%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
           K+FVGNL D      L+ +F+ +  V ECDIV+NY FVH+E + V    I  L G  + G
Sbjct: 4   KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62

Query: 327 QGIKIEAAKSRKAPS 371
           + + I+ + S+  P+
Sbjct: 63  KVVNIKKSTSKLRPT 77


>Z78536-3|CAB01717.2|  360|Caenorhabditis elegans Hypothetical
           protein C07A4.1 protein.
          Length = 360

 Score = 60.5 bits (140), Expect = 5e-10
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
 Frame = +3

Query: 135 AGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDI--VRNYGFVHMENEQVGREAIQNLN 308
           A    ++VGN+S +TTDADLR LF  YG + E  I   + Y FV  E ++   +AI  +N
Sbjct: 234 ADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMN 293

Query: 309 GELVHGQGIKIEAAKSRKAPS 371
           G+ + G  ++    +++  P+
Sbjct: 294 GKEMAGNQVRCSWGRTQAVPN 314



 Score = 44.8 bits (101), Expect = 3e-05
 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
 Frame = +3

Query: 114 VETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHME 269
           +E ++  +  F +FVG+LS   ++  L+  F K+G V E  ++R+        YGFV   
Sbjct: 125 MEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFP 184

Query: 270 NEQVGREAIQNLNGELVHGQGIKIEAAKSRKA 365
           N+Q    AI  +NG+ +  + ++   A  + +
Sbjct: 185 NKQNAENAIAGMNGKWIGKRAVRTNWAARKNS 216


>U41531-7|AAA83161.2|  415|Caenorhabditis elegans Feminizing gene on
           x protein 1 protein.
          Length = 415

 Score = 53.6 bits (123), Expect = 5e-08
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
 Frame = +3

Query: 111 DVETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN------YGFVHMEN 272
           D  T     G  ++ V N+  +  D DL+ +FEK+G V + +I+ N      +GFV ME 
Sbjct: 142 DPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMER 201

Query: 273 EQVGREAIQNLNGELVHGQGIKIEAAKSR 359
            Q    A Q L+G ++ G+ I++  A +R
Sbjct: 202 PQDAERARQELHGSMIEGRKIEVNCATAR 230


>U14946-1|AAA67723.1|  415|Caenorhabditis elegans ribonucleoprotein
           protein.
          Length = 415

 Score = 53.6 bits (123), Expect = 5e-08
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
 Frame = +3

Query: 111 DVETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN------YGFVHMEN 272
           D  T     G  ++ V N+  +  D DL+ +FEK+G V + +I+ N      +GFV ME 
Sbjct: 142 DPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMER 201

Query: 273 EQVGREAIQNLNGELVHGQGIKIEAAKSR 359
            Q    A Q L+G ++ G+ I++  A +R
Sbjct: 202 PQDAERARQELHGSMIEGRKIEVNCATAR 230


>U23172-15|AAN63408.1|  374|Caenorhabditis elegans Hypothetical
           protein F25B5.7d protein.
          Length = 374

 Score = 49.2 bits (112), Expect = 1e-06
 Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = +3

Query: 111 DVETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGR 287
           D   K    G  ++FVGNL ++  + +L+ LF  +G + EC +  + + F+ ++      
Sbjct: 105 DEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAE 164

Query: 288 EAIQNLNGELVHGQGIKIEAA 350
            A + ++G ++HG+ +++  A
Sbjct: 165 SAKEAIDGRIIHGRQVRVRFA 185


>U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical
           protein F25B5.7a protein.
          Length = 562

 Score = 49.2 bits (112), Expect = 1e-06
 Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = +3

Query: 111 DVETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGR 287
           D   K    G  ++FVGNL ++  + +L+ LF  +G + EC +  + + F+ ++      
Sbjct: 105 DEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAE 164

Query: 288 EAIQNLNGELVHGQGIKIEAA 350
            A + ++G ++HG+ +++  A
Sbjct: 165 SAKEAIDGRIIHGRQVRVRFA 185


>Z66521-4|CAD59160.1|  150|Caenorhabditis elegans Hypothetical
           protein W02B12.3c protein.
          Length = 150

 Score = 47.6 bits (108), Expect = 4e-06
 Identities = 17/71 (23%), Positives = 43/71 (60%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
           +I++G L+ + ++ D+   F  YG + +  +   +GFV  ++++   +A+ +LNG+ + G
Sbjct: 4   RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63

Query: 327 QGIKIEAAKSR 359
           + + ++ +K R
Sbjct: 64  ERVILDYSKPR 74


>Z66521-3|CAD59159.1|  148|Caenorhabditis elegans Hypothetical
           protein W02B12.3b protein.
          Length = 148

 Score = 47.6 bits (108), Expect = 4e-06
 Identities = 17/71 (23%), Positives = 43/71 (60%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
           +I++G L+ + ++ D+   F  YG + +  +   +GFV  ++++   +A+ +LNG+ + G
Sbjct: 4   RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63

Query: 327 QGIKIEAAKSR 359
           + + ++ +K R
Sbjct: 64  ERVILDYSKPR 74


>Z66521-2|CAA91395.1|  312|Caenorhabditis elegans Hypothetical
           protein W02B12.3a protein.
          Length = 312

 Score = 47.6 bits (108), Expect = 4e-06
 Identities = 17/71 (23%), Positives = 43/71 (60%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
           +I++G L+ + ++ D+   F  YG + +  +   +GFV  ++++   +A+ +LNG+ + G
Sbjct: 4   RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63

Query: 327 QGIKIEAAKSR 359
           + + ++ +K R
Sbjct: 64  ERVILDYSKPR 74


>U24123-1|AAA65224.1|  646|Caenorhabditis elegans
           polyadenylate-binding protein protein.
          Length = 646

 Score = 47.6 bits (108), Expect = 4e-06
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
 Frame = +3

Query: 126 MPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 284
           M  +G   IF+ NL     +  +   F  +G ++ C +        + YGFVH E E+  
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173

Query: 285 REAIQNLNGELVHGQGIKI-----EAAKSRKAPSTPT--TKIFVGNLTD 410
           + AIQ +NG L+ G+ + +      A ++R+   T    T ++V N  D
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGD 222



 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 311
           ++V N  D      L  +F K+G +  C+++      + +GFV   N +    A+Q L+ 
Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274

Query: 312 ELVHGQGIKIEAAKSRK 362
             + G  +K+   +++K
Sbjct: 275 STIEGTDLKLHVCRAQK 291


>AL032631-3|CAE54916.1|  583|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2b protein.
          Length = 583

 Score = 47.6 bits (108), Expect = 4e-06
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
 Frame = +3

Query: 126 MPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 284
           M  +G   IF+ NL     +  +   F  +G ++ C +        + YGFVH E E+  
Sbjct: 51  MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 110

Query: 285 REAIQNLNGELVHGQGIKI-----EAAKSRKAPSTPT--TKIFVGNLTD 410
           + AIQ +NG L+ G+ + +      A ++R+   T    T ++V N  D
Sbjct: 111 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGD 159



 Score = 43.2 bits (97), Expect = 8e-05
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 311
           ++V N  D      L  LF K+G +  C+++      + +GFV   N +    A+Q L+ 
Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 211

Query: 312 ELVHGQGIKIEAAKSRK 362
             + G  +K+   +++K
Sbjct: 212 STIEGTDLKLHVCRAQK 228


>AL032631-2|CAA21572.1|  646|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2a protein.
          Length = 646

 Score = 47.6 bits (108), Expect = 4e-06
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
 Frame = +3

Query: 126 MPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 284
           M  +G   IF+ NL     +  +   F  +G ++ C +        + YGFVH E E+  
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173

Query: 285 REAIQNLNGELVHGQGIKI-----EAAKSRKAPSTPT--TKIFVGNLTD 410
           + AIQ +NG L+ G+ + +      A ++R+   T    T ++V N  D
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGD 222



 Score = 43.2 bits (97), Expect = 8e-05
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 311
           ++V N  D      L  LF K+G +  C+++      + +GFV   N +    A+Q L+ 
Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274

Query: 312 ELVHGQGIKIEAAKSRK 362
             + G  +K+   +++K
Sbjct: 275 STIEGTDLKLHVCRAQK 291


>Z36238-3|CAA85276.1|  404|Caenorhabditis elegans Hypothetical
           protein R74.5a protein.
          Length = 404

 Score = 45.2 bits (102), Expect = 2e-05
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
 Frame = +3

Query: 138 GTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 299
           G  ++ V N+  K  + DL  +FEK G VV+ +I+ N      +GFV M+N      A  
Sbjct: 98  GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARA 157

Query: 300 NLNGELVHGQGIKIEAAKSR 359
             NG  + G+ +++  A  R
Sbjct: 158 EFNGTTIEGRRVEVNLATQR 177


>DQ485531-1|ABF22491.1|  404|Caenorhabditis elegans RNA-binding
           protein ASD-1 protein.
          Length = 404

 Score = 45.2 bits (102), Expect = 2e-05
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
 Frame = +3

Query: 138 GTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 299
           G  ++ V N+  K  + DL  +FEK G VV+ +I+ N      +GFV M+N      A  
Sbjct: 98  GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARA 157

Query: 300 NLNGELVHGQGIKIEAAKSR 359
             NG  + G+ +++  A  R
Sbjct: 158 EFNGTTIEGRRVEVNLATQR 177


>Z83230-6|CAB05746.1|  336|Caenorhabditis elegans Hypothetical
           protein F56A8.6 protein.
          Length = 336

 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 305
           +FVGN+S   ++  +R +F K G V+   +V        + YGF+   + Q    AI+NL
Sbjct: 20  VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79

Query: 306 NGELVHGQGIKIEAA 350
           NG  + G+ +++++A
Sbjct: 80  NGYELSGRILRVDSA 94


>Z66521-8|CAA91394.1|  281|Caenorhabditis elegans Hypothetical
           protein W02B12.2 protein.
          Length = 281

 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 16/66 (24%), Positives = 40/66 (60%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
           ++++G L ++ +D D+   F  YG + +  +   +GFV  ++++   +A+ +LNG+ + G
Sbjct: 3   RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62

Query: 327 QGIKIE 344
           + + +E
Sbjct: 63  ERVILE 68


>U23484-3|AAK68298.1|  126|Caenorhabditis elegans Sr protein
           (splicing factor) protein4, isoform b protein.
          Length = 126

 Score = 43.2 bits (97), Expect = 8e-05
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
 Frame = +3

Query: 138 GTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 293
           G   + + NLS +TT  DLR  FE+YG + +  I R+        +GFV     +    A
Sbjct: 17  GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76

Query: 294 IQNLNGELVHGQGIKIEAAK 353
           +   +G+LV G+ +++  AK
Sbjct: 77  LDRTDGKLVDGRELRVTLAK 96


>U23484-2|AAC46767.1|  196|Caenorhabditis elegans Sr protein
           (splicing factor) protein4, isoform a protein.
          Length = 196

 Score = 43.2 bits (97), Expect = 8e-05
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
 Frame = +3

Query: 138 GTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 293
           G   + + NLS +TT  DLR  FE+YG + +  I R+        +GFV     +    A
Sbjct: 17  GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76

Query: 294 IQNLNGELVHGQGIKIEAAK 353
           +   +G+LV G+ +++  AK
Sbjct: 77  LDRTDGKLVDGRELRVTLAK 96


>AL032631-4|CAE54917.1|  586|Caenorhabditis elegans Hypothetical
           protein Y106G6H.2c protein.
          Length = 586

 Score = 43.2 bits (97), Expect = 8e-05
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 311
           ++V N  D      L  LF K+G +  C+++      + +GFV   N +    A+Q L+ 
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 214

Query: 312 ELVHGQGIKIEAAKSRK 362
             + G  +K+   +++K
Sbjct: 215 STIEGTDLKLHVCRAQK 231


>Z49910-5|CAA90120.1|  411|Caenorhabditis elegans Hypothetical
           protein F44G4.4a protein.
          Length = 411

 Score = 42.3 bits (95), Expect = 1e-04
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
 Frame = +3

Query: 174 KTTDADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVGRE-AIQNLNGELVHGQ 329
           KTTD   +  FE  GTVV C+I R        +GFV M +  VG +  +  +   ++ G+
Sbjct: 183 KTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS--VGEQNKVLAIPQHMIDGR 240

Query: 330 GIKIEAAKSRKAPSTPT-TKIFVGNLTDK 413
              ++    R     P+ ++IFVG LTDK
Sbjct: 241 RCDVKVPDGRDKQGRPSISRIFVGRLTDK 269



 Score = 26.6 bits (56), Expect = 7.1
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLF----EKY-GTVVECDI-----VRNYGFVHMENEQVGREAI 296
           +IFVG L+DK  +  LR +F    + Y  T V  D+      R + FV + + +   E I
Sbjct: 260 RIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAA-ERI 318

Query: 297 QNLNGELVHGQGIKIEAAKSRK 362
            +     V+G  + +  A+ R+
Sbjct: 319 VSKGSLTVNGLSVGLSIAQPRE 340


>U80455-1|AAB37881.1|  584|Caenorhabditis elegans Elav-type rna
           binding protein familyprotein 1, isoform a protein.
          Length = 584

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
 Frame = +3

Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
           P     K+FVG +  +  + D R LFEKYG+V  C+I+R+             F H ++ 
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
              + A+ N+  +++ G    ++  K     +    K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152



 Score = 37.5 bits (83), Expect = 0.004
 Identities = 13/34 (38%), Positives = 24/34 (70%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
           K+F+G LS K  + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176



 Score = 32.7 bits (71), Expect = 0.11
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 305
           +F+ +L     D+DL   F  +G ++      D V N    +GFV  EN Q    AI  +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560

Query: 306 NGELVHGQGIKIEAAKSRKAP 368
           NG  +  + +K++    R  P
Sbjct: 561 NGFQIGSKRLKVQLKVDRGNP 581


>U53931-1|AAA98566.1|  584|Caenorhabditis elegans elav-type
           ribonucleoprotein protein.
          Length = 584

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
 Frame = +3

Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
           P     K+FVG +  +  + D R LFEKYG+V  C+I+R+             F H ++ 
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
              + A+ N+  +++ G    ++  K     +    K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152



 Score = 37.5 bits (83), Expect = 0.004
 Identities = 13/34 (38%), Positives = 24/34 (70%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
           K+F+G LS K  + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176



 Score = 32.7 bits (71), Expect = 0.11
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 305
           +F+ +L     D+DL   F  +G ++      D V N    +GFV  EN Q    AI  +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560

Query: 306 NGELVHGQGIKIEAAKSRKAP 368
           NG  +  + +K++    R  P
Sbjct: 561 NGFQIGSKRLKVQLKVDRGNP 581


>EF523770-1|ABS18836.1|  513|Caenorhabditis elegans ELAV-type RNA
           binding protein variantE protein.
          Length = 513

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
 Frame = +3

Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
           P     K+FVG +  +  + D R LFEKYG+V  C+I+R+             F H ++ 
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
              + A+ N+  +++ G    ++  K     +    K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152



 Score = 37.5 bits (83), Expect = 0.004
 Identities = 13/34 (38%), Positives = 24/34 (70%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
           K+F+G LS K  + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176



 Score = 32.7 bits (71), Expect = 0.11
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 305
           +F+ +L     D+DL   F  +G ++      D V N    +GFV  EN Q    AI  +
Sbjct: 430 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 489

Query: 306 NGELVHGQGIKIEAAKSRKAP 368
           NG  +  + +K++    R  P
Sbjct: 490 NGFQIGSKRLKVQLKVDRGNP 510


>EF523769-1|ABS18835.1|  327|Caenorhabditis elegans ELAV-type RNA
           binding protein variantD protein.
          Length = 327

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
 Frame = +3

Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
           P     K+FVG +  +  + D R LFEKYG+V  C+I+R+             F H ++ 
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
              + A+ N+  +++ G    ++  K     +    K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152



 Score = 37.5 bits (83), Expect = 0.004
 Identities = 13/34 (38%), Positives = 24/34 (70%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
           K+F+G LS K  + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176


>EF523768-1|ABS18834.1|  378|Caenorhabditis elegans ELAV-type RNA
           binding protein variantC protein.
          Length = 378

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
 Frame = +3

Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
           P     K+FVG +  +  + D R LFEKYG+V  C+I+R+             F H ++ 
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
              + A+ N+  +++ G    ++  K     +    K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152



 Score = 37.5 bits (83), Expect = 0.004
 Identities = 13/34 (38%), Positives = 24/34 (70%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
           K+F+G LS K  + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176


>EF523767-1|ABS18833.1|  193|Caenorhabditis elegans ELAV-type RNA
           binding protein variantB protein.
          Length = 193

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
 Frame = +3

Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
           P     K+FVG +  +  + D R LFEKYG+V  C+I+R+             F H ++ 
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
              + A+ N+  +++ G    ++  K     +    K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152



 Score = 37.5 bits (83), Expect = 0.004
 Identities = 13/34 (38%), Positives = 24/34 (70%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
           K+F+G LS K  + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176


>EF523766-1|ABS18832.1|  584|Caenorhabditis elegans ELAV-type RNA
           binding protein variantA protein.
          Length = 584

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
 Frame = +3

Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
           P     K+FVG +  +  + D R LFEKYG+V  C+I+R+             F H ++ 
Sbjct: 50  PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109

Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
              + A+ N+  +++ G    ++  K     +    K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152



 Score = 37.5 bits (83), Expect = 0.004
 Identities = 13/34 (38%), Positives = 24/34 (70%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
           K+F+G LS K  + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176



 Score = 32.7 bits (71), Expect = 0.11
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 305
           +F+ +L     D+DL   F  +G ++      D V N    +GFV  EN Q    AI  +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560

Query: 306 NGELVHGQGIKIEAAKSRKAP 368
           NG  +  + +K++    R  P
Sbjct: 561 NGFQIGSKRLKVQLKVDRGNP 581


>Z36752-6|CAA85327.1|  456|Caenorhabditis elegans Hypothetical
           protein F35H8.5 protein.
          Length = 456

 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
 Frame = +3

Query: 105 AADVETKMPGAGT--FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN-------YGF 257
           +A V   +P + T  + +FV NLS  T D  L  LF ++G +V   I+R+       Y F
Sbjct: 359 SASVAATLPPSDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAF 418

Query: 258 VHMENEQVGREAIQNLNGELVHGQGIKI 341
           V M N      A+ +LNG  + G+ +++
Sbjct: 419 VSMSNYTEAYNAMLSLNGTNLAGKTLQV 446



 Score = 35.9 bits (79), Expect = 0.012
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
 Frame = +3

Query: 132 GAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGR 287
           G     + +  L    T  ++R LF   G +  C +VR+        YGFV+   E+   
Sbjct: 38  GESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDAL 97

Query: 288 EAIQNLNGELVHGQGIKIEAAK 353
            A+ + NG  +  + IK+  A+
Sbjct: 98  RAVSSFNGLRLQNKTIKVSYAR 119


>Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical
           protein F18H3.3b protein.
          Length = 566

 Score = 41.1 bits (92), Expect = 3e-04
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
 Frame = +3

Query: 135 AGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREA 293
           AG   IF+ NL     +  +   F  +G ++ C +        + YGFVH E E   + A
Sbjct: 142 AGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTA 201

Query: 294 IQNLNGELVHGQGIKI 341
           I+ +NG L+  + + +
Sbjct: 202 IEKVNGMLLSDKKVYV 217



 Score = 35.9 bits (79), Expect = 0.012
 Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 308
           +FV N  +      L  +F K+G +    ++       + +GFV   ++    +A++ LN
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN 299

Query: 309 GELVHGQGIKIEAAKSRK 362
             ++ G   K+   +++K
Sbjct: 300 DSILEGTDCKLSVCRAQK 317


>Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical
           protein F18H3.3a protein.
          Length = 692

 Score = 41.1 bits (92), Expect = 3e-04
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
 Frame = +3

Query: 135 AGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREA 293
           AG   IF+ NL     +  +   F  +G ++ C +        + YGFVH E E   + A
Sbjct: 142 AGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTA 201

Query: 294 IQNLNGELVHGQGIKI 341
           I+ +NG L+  + + +
Sbjct: 202 IEKVNGMLLSDKKVYV 217



 Score = 35.9 bits (79), Expect = 0.012
 Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 308
           +FV N  +      L  +F K+G +    ++       + +GFV   ++    +A++ LN
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN 299

Query: 309 GELVHGQGIKIEAAKSRK 362
             ++ G   K+   +++K
Sbjct: 300 DSILEGTDCKLSVCRAQK 317


>U28944-7|AAN63457.1|  295|Caenorhabditis elegans Hypothetical
           protein C18A3.5f protein.
          Length = 295

 Score = 41.1 bits (92), Expect = 3e-04
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
 Frame = +3

Query: 117 ETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 272
           ++K+     F +FVG+LS +  +  LR  F+ +G V +  ++R+        YGFV    
Sbjct: 13  QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 72

Query: 273 EQVGREAIQNLNGE 314
            +    AI+ +NG+
Sbjct: 73  REEAERAIEQMNGQ 86


>U28944-6|AAN63456.1|  305|Caenorhabditis elegans Hypothetical
           protein C18A3.5e protein.
          Length = 305

 Score = 41.1 bits (92), Expect = 3e-04
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
 Frame = +3

Query: 117 ETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 272
           ++K+     F +FVG+LS +  +  LR  F+ +G V +  ++R+        YGFV    
Sbjct: 23  QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 82

Query: 273 EQVGREAIQNLNGE 314
            +    AI+ +NG+
Sbjct: 83  REEAERAIEQMNGQ 96


>U28944-5|AAK68191.1|  408|Caenorhabditis elegans Hypothetical
           protein C18A3.5a protein.
          Length = 408

 Score = 41.1 bits (92), Expect = 3e-04
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
 Frame = +3

Query: 117 ETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 272
           ++K+     F +FVG+LS +  +  LR  F+ +G V +  ++R+        YGFV    
Sbjct: 126 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 185

Query: 273 EQVGREAIQNLNGE 314
            +    AI+ +NG+
Sbjct: 186 REEAERAIEQMNGQ 199


>U28944-4|AAK68192.1|  376|Caenorhabditis elegans Hypothetical
           protein C18A3.5b protein.
          Length = 376

 Score = 41.1 bits (92), Expect = 3e-04
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
 Frame = +3

Query: 117 ETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 272
           ++K+     F +FVG+LS +  +  LR  F+ +G V +  ++R+        YGFV    
Sbjct: 94  QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 153

Query: 273 EQVGREAIQNLNGE 314
            +    AI+ +NG+
Sbjct: 154 REEAERAIEQMNGQ 167


>Z81108-4|CAB03237.1|   85|Caenorhabditis elegans Hypothetical
           protein R09B3.3 protein.
          Length = 85

 Score = 40.7 bits (91), Expect = 4e-04
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
 Frame = +3

Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 299
           F ++VGN   +TT+ DL   F + G V    IV        R + FV    E   + A+ 
Sbjct: 4   FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVD 63

Query: 300 NLNGELVHGQGIKIEAAKSR 359
             NG   +G+ +++  A++R
Sbjct: 64  QFNGVDFNGRALRVNLAQNR 83


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 40.7 bits (91), Expect = 4e-04
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
           I+VG L +K +++ L  L  + G VV  ++ ++        +GFV    E+    AI+ L
Sbjct: 15  IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74

Query: 306 NGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
           N   ++G+ IK+  A + +        IFVGNL
Sbjct: 75  NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNL 107



 Score = 27.9 bits (59), Expect = 3.1
 Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTV---------VECDIVRNYGFVHMENEQVGREAIQN 302
           IFVGNL  +  +  L   F  +G +         V+    + + F++  + +    A++ 
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161

Query: 303 LNGELVHGQGIKIEAAKSR 359
           +NG+ +  + I +  A  R
Sbjct: 162 MNGQFLCNRAITVSYAFKR 180


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 40.7 bits (91), Expect = 4e-04
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
           I+VG L +K +++ L  L  + G VV  ++ ++        +GFV    E+    AI+ L
Sbjct: 25  IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84

Query: 306 NGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
           N   ++G+ IK+  A + +        IFVGNL
Sbjct: 85  NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNL 117



 Score = 27.9 bits (59), Expect = 3.1
 Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTV---------VECDIVRNYGFVHMENEQVGREAIQN 302
           IFVGNL  +  +  L   F  +G +         V+    + + F++  + +    A++ 
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171

Query: 303 LNGELVHGQGIKIEAAKSR 359
           +NG+ +  + I +  A  R
Sbjct: 172 MNGQFLCNRAITVSYAFKR 190


>Z97628-2|CAB10726.2|  427|Caenorhabditis elegans Hypothetical
           protein F39H2.2a protein.
          Length = 427

 Score = 40.3 bits (90), Expect = 5e-04
 Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
           +FV  L+  TTD DL  +F ++G +  C+IVR+        Y F+  +N +   +A   +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302

Query: 306 NGELVHGQGIKIEAAKS 356
           +  L+  + I ++ ++S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319


>Z81080-5|CAB03088.2|  427|Caenorhabditis elegans Hypothetical
           protein F39H2.2a protein.
          Length = 427

 Score = 40.3 bits (90), Expect = 5e-04
 Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
           +FV  L+  TTD DL  +F ++G +  C+IVR+        Y F+  +N +   +A   +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302

Query: 306 NGELVHGQGIKIEAAKS 356
           +  L+  + I ++ ++S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319


>Z81080-2|CAD56584.1|  358|Caenorhabditis elegans Hypothetical
           protein F39H2.2b protein.
          Length = 358

 Score = 40.3 bits (90), Expect = 5e-04
 Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
           +FV  L+  TTD DL  +F ++G +  C+IVR+        Y F+  +N +   +A   +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233

Query: 306 NGELVHGQGIKIEAAKS 356
           +  L+  + I ++ ++S
Sbjct: 234 DNVLIDDRRIHVDFSQS 250


>AL137227-1|CAB70238.2|  611|Caenorhabditis elegans Hypothetical
           protein F58D5.1 protein.
          Length = 611

 Score = 39.9 bits (89), Expect = 7e-04
 Identities = 16/68 (23%), Positives = 36/68 (52%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 329
           +++ N+ +  T+  L  LF++Y ++     V++Y F+H        +A++  NG+ + G 
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438

Query: 330 GIKIEAAK 353
            ++   AK
Sbjct: 439 VVEASLAK 446



 Score = 33.1 bits (72), Expect = 0.082
 Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
 Frame = +3

Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVG 284
           P     +I+VG++     +  L PLFEK G + +  ++        R Y FV   N++  
Sbjct: 195 PAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDA 254

Query: 285 REAIQNLNG-ELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
             A +  +G E+  G+ +K+         S   T++F+GN+
Sbjct: 255 AAAAKTYDGHEISTGKPLKVNV-------SIANTRLFIGNI 288


>Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical
           protein C18D11.4 protein.
          Length = 309

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
 Frame = +3

Query: 156 VGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNG 311
           V NLS  TT+ DLR +F ++G + +CD+V        R +GF++    +    A   L  
Sbjct: 80  VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139

Query: 312 ELVHGQGIKIEAAKSRKAPSTPTTKIFVGN 401
             + G  I+++ + +++  S PT   ++G+
Sbjct: 140 TDLDGHKIRVDFSLTKRGHS-PTPGQYMGD 168


>AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical
           protein Y111B2A.18 protein.
          Length = 258

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
 Frame = +3

Query: 132 GAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQ 299
           G+   K++VGNL     + ++  +F KYG +   DI    G    FV  E+ +   +A++
Sbjct: 5   GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64

Query: 300 NLNGELVHGQGIKIE 344
             +G    G+ I++E
Sbjct: 65  ARDGYEFDGRRIRVE 79


>AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.
          Length = 258

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
 Frame = +3

Query: 132 GAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQ 299
           G+   K++VGNL     + ++  +F KYG +   DI    G    FV  E+ +   +A++
Sbjct: 5   GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64

Query: 300 NLNGELVHGQGIKIE 344
             +G    G+ I++E
Sbjct: 65  ARDGYEFDGRRIRVE 79


>Z81108-1|CAB03236.1|   83|Caenorhabditis elegans Hypothetical
           protein R09B3.2 protein.
          Length = 83

 Score = 38.3 bits (85), Expect = 0.002
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
 Frame = +3

Query: 135 AGTFKIFVGNLSDKTTDADLRPLFEKYGTV----VECD----IVRNYGFVHMENEQVGRE 290
           +G F ++VGN   +TT+ +L   F   G +    + CD      R + F+    E   + 
Sbjct: 2   SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61

Query: 291 AIQNLNGELVHGQGIKIEAA 350
           A++ +NG   +G+ +++  A
Sbjct: 62  AVEQMNGAEFNGRPLRVNLA 81


>AL110485-8|CAB60356.1|  434|Caenorhabditis elegans Hypothetical
           protein Y46G5A.13 protein.
          Length = 434

 Score = 38.3 bits (85), Expect = 0.002
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
 Frame = +3

Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQ 299
           F +FVG+L  +     LR  F K+G V E  I+R+        YGFV     +    AI 
Sbjct: 132 FHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAID 191

Query: 300 NLNG 311
            +NG
Sbjct: 192 EMNG 195


>AC084197-11|AAM44397.1|  305|Caenorhabditis elegans Homologous to
           drosophila sqd (squid)protein protein 1, isoform a
           protein.
          Length = 305

 Score = 37.9 bits (84), Expect = 0.003
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHME-NEQVGREAIQNL 305
           KIFVG +S +  + DL   F +YG V +  +       R+ GF  +E     G +     
Sbjct: 30  KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89

Query: 306 NGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
             + + G+ ++++ AKSR+       K+FVG L
Sbjct: 90  REQTIKGKSVEVKPAKSRE-----NKKVFVGGL 117



 Score = 30.3 bits (65), Expect = 0.58
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECD--------IVRNYGFVHMENEQVGREA 293
           K+FVG L    ++ DLR  FE++G V + +          RN+ F+  E E+   +A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167


>AC084197-10|AAY43984.1|  308|Caenorhabditis elegans Homologous to
           drosophila sqd (squid)protein protein 1, isoform b
           protein.
          Length = 308

 Score = 37.9 bits (84), Expect = 0.003
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHME-NEQVGREAIQNL 305
           KIFVG +S +  + DL   F +YG V +  +       R+ GF  +E     G +     
Sbjct: 30  KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89

Query: 306 NGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
             + + G+ ++++ AKSR+       K+FVG L
Sbjct: 90  REQTIKGKSVEVKPAKSRE-----NKKVFVGGL 117



 Score = 30.3 bits (65), Expect = 0.58
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECD--------IVRNYGFVHMENEQVGREA 293
           K+FVG L    ++ DLR  FE++G V + +          RN+ F+  E E+   +A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167


>AF047662-1|AAC04442.1|  248|Caenorhabditis elegans Suppressor
           protein 12 protein.
          Length = 248

 Score = 37.5 bits (83), Expect = 0.004
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 302
           KIFVG L   T+D  L   FE++G + E  ++        R YGFV M++      A ++
Sbjct: 36  KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95

Query: 303 LNGELVHGQGIKIEAAKSRKAPST 374
            N  ++ G+   +  A     P T
Sbjct: 96  PN-PIIDGRKANVNLAYLGAKPRT 118


>U23450-2|AAK31468.1|  302|Caenorhabditis elegans Hypothetical
           protein C30B5.4 protein.
          Length = 302

 Score = 37.1 bits (82), Expect = 0.005
 Identities = 19/81 (23%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
           I++G LS   ++ D+  +F +YG V+  +++R+        + F+  ++++    A+ N 
Sbjct: 40  IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99

Query: 306 NGELVHGQGIKIEAAKSRKAP 368
           NG  +H + I+++  +  K P
Sbjct: 100 NGISLHKRMIRVDHVEEYKVP 120


>AC024791-22|AAF60676.1|  339|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform a protein.
          Length = 339

 Score = 37.1 bits (82), Expect = 0.005
 Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
 Frame = +3

Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 299
           F+++V ++    ++ DL+ +FE +G +V+C +         R +G++   N     EAI 
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266

Query: 300 NLNGELVHGQGIKI 341
            +N   + GQ +++
Sbjct: 267 GMNMFDLGGQYLRV 280


>AC024791-21|AAF60666.1|  749|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform b protein.
          Length = 749

 Score = 37.1 bits (82), Expect = 0.005
 Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
 Frame = +3

Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 299
           F+++V ++    ++ DL+ +FE +G +V+C +         R +G++   N     EAI 
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266

Query: 300 NLNGELVHGQGIKI 341
            +N   + GQ +++
Sbjct: 267 GMNMFDLGGQYLRV 280


>AC024791-23|AAM81102.1|  346|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 6, isoform c protein.
          Length = 346

 Score = 35.9 bits (79), Expect = 0.012
 Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
 Frame = +3

Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 299
           F+++V ++    ++ DL+ +FE +G +V+C +         R +G++   N     EAI 
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266

Query: 300 NLNGELVHGQGIK 338
            +N   + GQ ++
Sbjct: 267 GMNMFDLGGQYLR 279


>Z36238-4|CAD82915.1|  286|Caenorhabditis elegans Hypothetical
           protein R74.5b protein.
          Length = 286

 Score = 35.5 bits (78), Expect = 0.015
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
 Frame = +3

Query: 201 LFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNGELVHGQGIKIEAAKSR 359
           +FEK G VV+ +I+ N      +GFV M+N      A    NG  + G+ +++  A  R
Sbjct: 1   MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59


>Z35601-1|CAA84667.2|  320|Caenorhabditis elegans Hypothetical
           protein R10E9.1 protein.
          Length = 320

 Score = 35.5 bits (78), Expect = 0.015
 Identities = 20/82 (24%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
 Frame = +3

Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAI 296
           T K+F+G LS  +T  D++  FE YG V +  ++        R +GFV  ++++V  + +
Sbjct: 133 TKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA-DKV 191

Query: 297 QNLNGELVHGQGIKIEAAKSRK 362
             ++   ++G+ ++ + A+ ++
Sbjct: 192 CEIHFHEINGKMVECKKAQPKE 213


>AB036738-1|BAB13470.1|  320|Caenorhabditis elegans neural
           RNA-binding protein MSI-1 protein.
          Length = 320

 Score = 35.5 bits (78), Expect = 0.015
 Identities = 20/82 (24%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
 Frame = +3

Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAI 296
           T K+F+G LS  +T  D++  FE YG V +  ++        R +GFV  ++++V  + +
Sbjct: 133 TKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA-DKV 191

Query: 297 QNLNGELVHGQGIKIEAAKSRK 362
             ++   ++G+ ++ + A+ ++
Sbjct: 192 CEIHFHEINGKMVECKKAQPKE 213


>Z32683-11|CAA83626.1|  142|Caenorhabditis elegans Hypothetical
           protein R07E5.14 protein.
          Length = 142

 Score = 35.1 bits (77), Expect = 0.020
 Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDI--------VRNYGFVHMENEQVGREAIQNL 305
           +FV N+ ++ T+ D+   F +YG +    +        ++ Y  V  E ++   EAI   
Sbjct: 57  VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116

Query: 306 NGELVHGQGIKIE 344
           N   + GQ +K++
Sbjct: 117 NDTDLLGQNVKVD 129


>U23172-14|AAL02495.1|  165|Caenorhabditis elegans Hypothetical
           protein F25B5.7b protein.
          Length = 165

 Score = 34.7 bits (76), Expect = 0.027
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 111 DVETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVEC 233
           D   K    G  ++FVGNL ++  + +L+ LF  +G + EC
Sbjct: 105 DEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC 145


>U00052-10|AAK21429.2|  289|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 5 protein.
          Length = 289

 Score = 34.7 bits (76), Expect = 0.027
 Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIV---------RNYGFVHMENEQVGREAIQ 299
           ++ + NLS       L  +F  YG +   D+          R YG+V  +N +   ++I+
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193

Query: 300 NLNGELVHGQGIKIEAAKSRKA 365
           +++G  + G  + +E    R++
Sbjct: 194 HMDGGQIDGMAVHVEMTIGRQS 215


>AL117204-22|CAB55151.1|  331|Caenorhabditis elegans Hypothetical
           protein Y116A8C.34 protein.
          Length = 331

 Score = 34.7 bits (76), Expect = 0.027
 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
 Frame = +3

Query: 114 VETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHME 269
           + T  P      ++VG  ++  T+  L   F  +G VV   I         R +GFV  +
Sbjct: 1   MNTNFPHNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60

Query: 270 NEQVGREAIQNLNGELVHGQGIKIEAAKSRKA 365
             +    AI N+N   + G+ I++  A+  KA
Sbjct: 61  MAEDAAMAIDNMNESELFGKTIRVNFARPPKA 92


>AF098501-6|AAL38960.1|  315|Caenorhabditis elegans Hypothetical
           protein H28G03.1b protein.
          Length = 315

 Score = 34.7 bits (76), Expect = 0.027
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVH 263
           K+F+G LS  TTD  L   F ++G VV+  ++R+    H
Sbjct: 50  KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 88


>AF098501-5|AAM69104.1|  335|Caenorhabditis elegans Hypothetical
           protein H28G03.1c protein.
          Length = 335

 Score = 34.7 bits (76), Expect = 0.027
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVH 263
           K+F+G LS  TTD  L   F ++G VV+  ++R+    H
Sbjct: 70  KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 108


>AF098501-4|AAL38959.1|  336|Caenorhabditis elegans Hypothetical
           protein H28G03.1a protein.
          Length = 336

 Score = 34.7 bits (76), Expect = 0.027
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVH 263
           K+F+G LS  TTD  L   F ++G VV+  ++R+    H
Sbjct: 71  KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 109


>AC024818-2|AAF60781.1|  302|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 262 protein.
          Length = 302

 Score = 34.7 bits (76), Expect = 0.027
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
 Frame = +3

Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVR--------NYGFVHMENEQVGREAIQ 299
           F++F G+L ++ +D  L   F KY +  +  +VR         YGFV   + +    A++
Sbjct: 203 FRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMR 262

Query: 300 NLNGELVHGQGIKI 341
            ++G+ V  + IK+
Sbjct: 263 EMDGKYVGNRPIKL 276


>U39997-3|AAK68389.1|  498|Caenorhabditis elegans Human daz (deleted
           in azoospermia)homolog protein 1 protein.
          Length = 498

 Score = 34.3 bits (75), Expect = 0.035
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 290
           +IFVG     TT+ +LR  FEK+  V +  +V++       YGF+  E E    E
Sbjct: 67  RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 121


>AB025253-1|BAA88577.1|  499|Caenorhabditis elegans DAZ-1 protein.
          Length = 499

 Score = 34.3 bits (75), Expect = 0.035
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 290
           +IFVG     TT+ +LR  FEK+  V +  +V++       YGF+  E E    E
Sbjct: 68  RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 122


>U21320-5|AAA62536.2|  332|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 7 protein.
          Length = 332

 Score = 33.1 bits (72), Expect = 0.082
 Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 308
           +FVG ++ +T+++ LR  FE YG + +  +V       R Y F+   ++     A +  +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165

Query: 309 GELVHGQGIKIEAAKSR 359
           G  V G+ + ++  + R
Sbjct: 166 GIKVDGKRLVVDYERGR 182


>U80455-2|AAB37882.2|  420|Caenorhabditis elegans Elav-type rna
           binding protein familyprotein 1, isoform b protein.
          Length = 420

 Score = 32.7 bits (71), Expect = 0.11
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 305
           +F+ +L     D+DL   F  +G ++      D V N    +GFV  EN Q    AI  +
Sbjct: 337 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 396

Query: 306 NGELVHGQGIKIEAAKSRKAP 368
           NG  +  + +K++    R  P
Sbjct: 397 NGFQIGSKRLKVQLKVDRGNP 417


>AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical
           protein ZK616.1 protein.
          Length = 491

 Score = 32.7 bits (71), Expect = 0.11
 Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGT-VVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
           +FV  +S    D +L   F      VV+C +   YGFV  +     ++ I  ++G+ ++G
Sbjct: 98  VFVRGISRDMPDTELYQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMDGKTLNG 157

Query: 327 QGIKIEAAK 353
           + I +  A+
Sbjct: 158 KLISVSWAR 166


>Z81473-3|CAB03896.4|  514|Caenorhabditis elegans Hypothetical
           protein C17D12.2 protein.
          Length = 514

 Score = 32.3 bits (70), Expect = 0.14
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
           K+FVG +     + DLR LFE++G + E  I+++
Sbjct: 30  KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63



 Score = 29.5 bits (63), Expect = 1.0
 Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 305
           +F+ +L  +  DA+L  +F  +G +V   +         + +GFV  +N    + AI  +
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490

Query: 306 NGELVHGQGIKIEAAKSR 359
           NG  +  + +K++  + R
Sbjct: 491 NGFQIGMKRLKVQLKRPR 508


>U23484-7|ABB88232.1|  738|Caenorhabditis elegans Hypothetical
           protein EEED8.10a protein.
          Length = 738

 Score = 32.3 bits (70), Expect = 0.14
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVR 245
           KI V N+S K T + L+  F +YG +  C + R
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145


>AY342388-1|AAQ19851.1|  514|Caenorhabditis elegans putative
           RNA-binding protein protein.
          Length = 514

 Score = 32.3 bits (70), Expect = 0.14
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
           K+FVG +     + DLR LFE++G + E  I+++
Sbjct: 30  KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63



 Score = 29.5 bits (63), Expect = 1.0
 Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 305
           +F+ +L  +  DA+L  +F  +G +V   +         + +GFV  +N    + AI  +
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490

Query: 306 NGELVHGQGIKIEAAKSR 359
           NG  +  + +K++  + R
Sbjct: 491 NGFQIGMKRLKVQLKRPR 508


>Z73102-13|CAA97405.1|  836|Caenorhabditis elegans Hypothetical
           protein B0035.12 protein.
          Length = 836

 Score = 31.9 bits (69), Expect = 0.19
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
 Frame = +3

Query: 114 VETKMPGAGTFK-IFVGNLSDKTTDADLRPLFE-----KYGTVVECDIV-RNYGFVHMEN 272
           V+   PG    + IFV NL   TT+ ++R   E     ++      D+V R + +V MEN
Sbjct: 582 VQKAAPGTEDARTIFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMEN 641

Query: 273 EQVGREAI 296
           +Q  ++A+
Sbjct: 642 DQKAQQAL 649



 Score = 31.9 bits (69), Expect = 0.19
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTV 224
           K+FV N+  + TD +L+ LF K+GTV
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTV 709


>D10877-1|BAA01645.1|  346|Caenorhabditis elegans hnRNP like protein
           protein.
          Length = 346

 Score = 31.9 bits (69), Expect = 0.19
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
           KIFVG L+  TTD  +R  + ++G + +  ++R+
Sbjct: 24  KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57


>AF038613-6|ABB51186.1|  347|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform d protein.
          Length = 347

 Score = 31.9 bits (69), Expect = 0.19
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
           KIFVG L+  TTD  +R  + ++G + +  ++R+
Sbjct: 24  KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57


>AF038613-5|AAB92051.1|  346|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform a protein.
          Length = 346

 Score = 31.9 bits (69), Expect = 0.19
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
           KIFVG L+  TTD  +R  + ++G + +  ++R+
Sbjct: 24  KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57


>Z83127-4|CAB05631.1|  872|Caenorhabditis elegans Hypothetical
           protein T23F6.4 protein.
          Length = 872

 Score = 31.5 bits (68), Expect = 0.25
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
 Frame = +3

Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDI-------VRNYGFVHMENEQVGREAIQ 299
           T ++ V NL    T+  LR  FEKYG + +  +        R + FV   +E     A+ 
Sbjct: 2   TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALA 61

Query: 300 NLNGELVHGQGIKIEAAK 353
             N    + + + +E  +
Sbjct: 62  KSNQTFFNSKKLTVEECR 79



 Score = 31.5 bits (68), Expect = 0.25
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +3

Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV 242
           T ++F+ NL   T + DL+ LF+KYG V E  +V
Sbjct: 278 TGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVV 311



 Score = 30.3 bits (65), Expect = 0.58
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 15/87 (17%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEK-YGTVVEC--------------DIVRNYGFVHMENEQVG 284
           +FV NL+  TTD  L  LF K YG +V+                +   +GFV        
Sbjct: 643 LFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFYTAFDA 702

Query: 285 REAIQNLNGELVHGQGIKIEAAKSRKA 365
           + A++++ GEL+ G  ++++ +    A
Sbjct: 703 KTALKDMQGELLDGHSLELKISHRENA 729


>AF067616-7|AAM98029.1|  423|Caenorhabditis elegans Hypothetical
           protein F29C4.7b protein.
          Length = 423

 Score = 31.5 bits (68), Expect = 0.25
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDI 239
           T  +FVGN+     + ++R +FE++G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200


>AF067616-6|AAC19192.1|  520|Caenorhabditis elegans Hypothetical
           protein F29C4.7a protein.
          Length = 520

 Score = 31.5 bits (68), Expect = 0.25
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDI 239
           T  +FVGN+     + ++R +FE++G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200


>AF067616-5|AAU05574.1|  497|Caenorhabditis elegans Hypothetical
           protein F29C4.7c protein.
          Length = 497

 Score = 31.5 bits (68), Expect = 0.25
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDI 239
           T  +FVGN+     + ++R +FE++G V E DI
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 177


>Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTV 224
           +FVGN+SDK +D  +R +  + G V
Sbjct: 49  VFVGNISDKCSDEFIRKILNECGNV 73


>Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTV 224
           +FVGN+SDK +D  +R +  + G V
Sbjct: 49  VFVGNISDKCSDEFIRKILNECGNV 73


>AF016452-14|AAB66020.1|  409|Caenorhabditis elegans Hypothetical
           protein T05H4.15a protein.
          Length = 409

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 264 CGRNRNF*RYRILRPYRTFRIAV*DQRLSFYRIG 163
           CGR      Y ++ PY +  +++ D R+S Y  G
Sbjct: 360 CGRGDCLQVYSLIDPYESLTLSIMDDRISIYATG 393


>Z81120-1|CAB03342.1|  207|Caenorhabditis elegans Hypothetical
           protein T12D8.2 protein.
          Length = 207

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 243 RNYGFVHMENEQVGREAIQNLNGELVHGQGIKIEAAKSR 359
           + + +V  ENEQ    AI  LNG     + +K+  A+ R
Sbjct: 53  KGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQR 91


>AF100307-1|ABB88211.1|  317|Caenorhabditis elegans Hypothetical
           protein T12B5.6b protein.
          Length = 317

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 267 ENEQVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTD 410
           EN+      I N   +L+ G+    +AAK  K  S    KI + N T+
Sbjct: 85  ENDSSSSNVIHNEQTKLIDGENFVEKAAKDFKILSKHARKIAIRNFTE 132


>Z77669-6|CAB01243.2|  371|Caenorhabditis elegans Hypothetical
           protein T07F10.3 protein.
          Length = 371

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
 Frame = +3

Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVGREAIQN 302
           F + V ++ D   DA+L  +F+KY +     + R         GFV   N+   + A+  
Sbjct: 156 FNLHVSSVPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVE 215

Query: 303 LNGELVHGQGIKIEAAKSR 359
           ++   V G  I ++ A SR
Sbjct: 216 MHRTKVGGCRIILKLAGSR 234


>Z81084-7|CAB03111.1|  312|Caenorhabditis elegans Hypothetical
           protein F46A9.6 protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQNLNGEL 317
           +FV NLS +  +  LR +F+ +       +    G    FV   + Q   +A+ +L G  
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQ 289

Query: 318 VHGQ---GIKIEAAKSRKA 365
           +      G++IE A+++ A
Sbjct: 290 ITANDRGGLRIEYARNKMA 308


>Z81037-10|CAB02754.1|  312|Caenorhabditis elegans Hypothetical
           protein F46A9.6 protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQNLNGEL 317
           +FV NLS +  +  LR +F+ +       +    G    FV   + Q   +A+ +L G  
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQ 289

Query: 318 VHGQ---GIKIEAAKSRKA 365
           +      G++IE A+++ A
Sbjct: 290 ITANDRGGLRIEYARNKMA 308


>X95609-1|CAA64867.1|  312|Caenorhabditis elegans mec-8 protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQNLNGEL 317
           +FV NLS +  +  LR +F+ +       +    G    FV   + Q   +A+ +L G  
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQ 289

Query: 318 VHGQ---GIKIEAAKSRKA 365
           +      G++IE A+++ A
Sbjct: 290 ITANDRGGLRIEYARNKMA 308


>X95608-1|CAA64866.1|  312|Caenorhabditis elegans mec-8 protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
 Frame = +3

Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQNLNGEL 317
           +FV NLS +  +  LR +F+ +       +    G    FV   + Q   +A+ +L G  
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQ 289

Query: 318 VHGQ---GIKIEAAKSRKA 365
           +      G++IE A+++ A
Sbjct: 290 ITANDRGGLRIEYARNKMA 308


>U80439-6|AAB37642.1|  564|Caenorhabditis elegans
           Ezrin/radixin/moesin protein 1,isoform b protein.
          Length = 564

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
           L  +  +V + + V +Y  +HMEN++ GR+  + L
Sbjct: 512 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 546


>U80439-5|AAB37643.1|  563|Caenorhabditis elegans
           Ezrin/radixin/moesin protein 1,isoform a protein.
          Length = 563

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
           L  +  +V + + V +Y  +HMEN++ GR+  + L
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 545


>AY643539-1|AAT66915.1|  566|Caenorhabditis elegans ERM-1C protein.
          Length = 566

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
           L  +  +V + + V +Y  +HMEN++ GR+  + L
Sbjct: 514 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 548


>AY643538-1|AAT66914.1|  563|Caenorhabditis elegans ERM-1A protein.
          Length = 563

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
           L  +  +V + + V +Y  +HMEN++ GR+  + L
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 545


>AB107270-3|BAC98358.1|  564|Caenorhabditis elegans ERM-1B protein.
          Length = 564

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
           L  +  +V + + V +Y  +HMEN++ GR+  + L
Sbjct: 512 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 546


>AB107270-2|BAC98357.1|  566|Caenorhabditis elegans ERM-1Asv
           protein.
          Length = 566

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
           L  +  +V + + V +Y  +HMEN++ GR+  + L
Sbjct: 514 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 548


>AB107270-1|BAC98356.1|  563|Caenorhabditis elegans ERM-1A protein.
          Length = 563

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
           L  +  +V + + V +Y  +HMEN++ GR+  + L
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 545


>AB107269-1|BAC98355.1|  564|Caenorhabditis elegans ERM-1B protein.
          Length = 564

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
           L  +  +V + + V +Y  +HMEN++ GR+  + L
Sbjct: 512 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 546


>AB107268-1|BAC98354.1|  563|Caenorhabditis elegans ERM-1A protein.
          Length = 563

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
           L  +  +V + + V +Y  +HMEN++ GR+  + L
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 545


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,068,725
Number of Sequences: 27780
Number of extensions: 146532
Number of successful extensions: 541
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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