Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A22
(414 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 62 2e-10
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 62 2e-10
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 60 5e-10
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 54 5e-08
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 54 5e-08
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 49 1e-06
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 49 1e-06
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 48 4e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 48 4e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 48 4e-06
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 45 2e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 45 2e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 44 3e-05
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 44 3e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 43 8e-05
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 43 8e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 43 8e-05
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 42 1e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 42 2e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 42 2e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 42 2e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 42 2e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 42 2e-04
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 42 2e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 42 2e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 41 3e-04
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 41 3e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 41 3e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 41 3e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 41 3e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 41 3e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 41 4e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 41 4e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 41 4e-04
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 40 5e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 40 7e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 39 0.001
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 39 0.001
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 39 0.001
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 38 0.002
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 38 0.002
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 38 0.003
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 38 0.003
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 38 0.004
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 37 0.005
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 37 0.005
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 37 0.005
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 36 0.012
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 36 0.015
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 36 0.015
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 36 0.015
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 35 0.020
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 35 0.027
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 35 0.027
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 35 0.027
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 35 0.027
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 35 0.027
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 35 0.027
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 35 0.027
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 34 0.035
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 34 0.035
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 33 0.082
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 33 0.11
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 33 0.11
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 32 0.14
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 32 0.14
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 32 0.14
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 32 0.19
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 32 0.19
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 32 0.19
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 32 0.19
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 31 0.25
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 31 0.25
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.25
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 31 0.25
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF016452-14|AAB66020.1| 409|Caenorhabditis elegans Hypothetical... 28 2.3
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 27 4.1
AF100307-1|ABB88211.1| 317|Caenorhabditis elegans Hypothetical ... 27 4.1
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical p... 26 9.4
X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein. 26 9.4
X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein. 26 9.4
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 26 9.4
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 26 9.4
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 26 9.4
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 26 9.4
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 26 9.4
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 26 9.4
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 26 9.4
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 26 9.4
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 26 9.4
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 61.7 bits (143), Expect = 2e-10
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
K+FVGNL D L+ +F+ + V ECDIV+NY FVH+E + V I L G + G
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62
Query: 327 QGIKIEAAKSRKAPS 371
+ + I+ + S+ P+
Sbjct: 63 KVVNIKKSTSKLRPT 77
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 61.7 bits (143), Expect = 2e-10
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
K+FVGNL D L+ +F+ + V ECDIV+NY FVH+E + V I L G + G
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62
Query: 327 QGIKIEAAKSRKAPS 371
+ + I+ + S+ P+
Sbjct: 63 KVVNIKKSTSKLRPT 77
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 60.5 bits (140), Expect = 5e-10
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +3
Query: 135 AGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDI--VRNYGFVHMENEQVGREAIQNLN 308
A ++VGN+S +TTDADLR LF YG + E I + Y FV E ++ +AI +N
Sbjct: 234 ADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMN 293
Query: 309 GELVHGQGIKIEAAKSRKAPS 371
G+ + G ++ +++ P+
Sbjct: 294 GKEMAGNQVRCSWGRTQAVPN 314
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = +3
Query: 114 VETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHME 269
+E ++ + F +FVG+LS ++ L+ F K+G V E ++R+ YGFV
Sbjct: 125 MEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFP 184
Query: 270 NEQVGREAIQNLNGELVHGQGIKIEAAKSRKA 365
N+Q AI +NG+ + + ++ A + +
Sbjct: 185 NKQNAENAIAGMNGKWIGKRAVRTNWAARKNS 216
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 53.6 bits (123), Expect = 5e-08
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = +3
Query: 111 DVETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN------YGFVHMEN 272
D T G ++ V N+ + D DL+ +FEK+G V + +I+ N +GFV ME
Sbjct: 142 DPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMER 201
Query: 273 EQVGREAIQNLNGELVHGQGIKIEAAKSR 359
Q A Q L+G ++ G+ I++ A +R
Sbjct: 202 PQDAERARQELHGSMIEGRKIEVNCATAR 230
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 53.6 bits (123), Expect = 5e-08
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = +3
Query: 111 DVETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN------YGFVHMEN 272
D T G ++ V N+ + D DL+ +FEK+G V + +I+ N +GFV ME
Sbjct: 142 DPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMER 201
Query: 273 EQVGREAIQNLNGELVHGQGIKIEAAKSR 359
Q A Q L+G ++ G+ I++ A +R
Sbjct: 202 PQDAERARQELHGSMIEGRKIEVNCATAR 230
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 49.2 bits (112), Expect = 1e-06
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 111 DVETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGR 287
D K G ++FVGNL ++ + +L+ LF +G + EC + + + F+ ++
Sbjct: 105 DEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAE 164
Query: 288 EAIQNLNGELVHGQGIKIEAA 350
A + ++G ++HG+ +++ A
Sbjct: 165 SAKEAIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 49.2 bits (112), Expect = 1e-06
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 111 DVETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGR 287
D K G ++FVGNL ++ + +L+ LF +G + EC + + + F+ ++
Sbjct: 105 DEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAE 164
Query: 288 EAIQNLNGELVHGQGIKIEAA 350
A + ++G ++HG+ +++ A
Sbjct: 165 SAKEAIDGRIIHGRQVRVRFA 185
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 47.6 bits (108), Expect = 4e-06
Identities = 17/71 (23%), Positives = 43/71 (60%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
+I++G L+ + ++ D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 327 QGIKIEAAKSR 359
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 47.6 bits (108), Expect = 4e-06
Identities = 17/71 (23%), Positives = 43/71 (60%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
+I++G L+ + ++ D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 327 QGIKIEAAKSR 359
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 47.6 bits (108), Expect = 4e-06
Identities = 17/71 (23%), Positives = 43/71 (60%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
+I++G L+ + ++ D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 327 QGIKIEAAKSR 359
+ + ++ +K R
Sbjct: 64 ERVILDYSKPR 74
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 47.6 bits (108), Expect = 4e-06
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Frame = +3
Query: 126 MPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 284
M +G IF+ NL + + F +G ++ C + + YGFVH E E+
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 285 REAIQNLNGELVHGQGIKI-----EAAKSRKAPSTPT--TKIFVGNLTD 410
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGD 222
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 311
++V N D L +F K+G + C+++ + +GFV N + A+Q L+
Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 312 ELVHGQGIKIEAAKSRK 362
+ G +K+ +++K
Sbjct: 275 STIEGTDLKLHVCRAQK 291
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 47.6 bits (108), Expect = 4e-06
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Frame = +3
Query: 126 MPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 284
M +G IF+ NL + + F +G ++ C + + YGFVH E E+
Sbjct: 51 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 110
Query: 285 REAIQNLNGELVHGQGIKI-----EAAKSRKAPSTPT--TKIFVGNLTD 410
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D
Sbjct: 111 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGD 159
Score = 43.2 bits (97), Expect = 8e-05
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 311
++V N D L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 211
Query: 312 ELVHGQGIKIEAAKSRK 362
+ G +K+ +++K
Sbjct: 212 STIEGTDLKLHVCRAQK 228
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 47.6 bits (108), Expect = 4e-06
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Frame = +3
Query: 126 MPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVG 284
M +G IF+ NL + + F +G ++ C + + YGFVH E E+
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 285 REAIQNLNGELVHGQGIKI-----EAAKSRKAPSTPT--TKIFVGNLTD 410
+ AIQ +NG L+ G+ + + A ++R+ T T ++V N D
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGD 222
Score = 43.2 bits (97), Expect = 8e-05
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 311
++V N D L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 312 ELVHGQGIKIEAAKSRK 362
+ G +K+ +++K
Sbjct: 275 STIEGTDLKLHVCRAQK 291
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +3
Query: 138 GTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 299
G ++ V N+ K + DL +FEK G VV+ +I+ N +GFV M+N A
Sbjct: 98 GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 300 NLNGELVHGQGIKIEAAKSR 359
NG + G+ +++ A R
Sbjct: 158 EFNGTTIEGRRVEVNLATQR 177
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +3
Query: 138 GTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQ 299
G ++ V N+ K + DL +FEK G VV+ +I+ N +GFV M+N A
Sbjct: 98 GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 300 NLNGELVHGQGIKIEAAKSR 359
NG + G+ +++ A R
Sbjct: 158 EFNGTTIEGRRVEVNLATQR 177
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 44.4 bits (100), Expect = 3e-05
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 305
+FVGN+S ++ +R +F K G V+ +V + YGF+ + Q AI+NL
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 306 NGELVHGQGIKIEAA 350
NG + G+ +++++A
Sbjct: 80 NGYELSGRILRVDSA 94
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 44.4 bits (100), Expect = 3e-05
Identities = 16/66 (24%), Positives = 40/66 (60%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
++++G L ++ +D D+ F YG + + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 327 QGIKIE 344
+ + +E
Sbjct: 63 ERVILE 68
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 43.2 bits (97), Expect = 8e-05
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Frame = +3
Query: 138 GTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 293
G + + NLS +TT DLR FE+YG + + I R+ +GFV + A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 294 IQNLNGELVHGQGIKIEAAK 353
+ +G+LV G+ +++ AK
Sbjct: 77 LDRTDGKLVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 43.2 bits (97), Expect = 8e-05
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Frame = +3
Query: 138 GTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREA 293
G + + NLS +TT DLR FE+YG + + I R+ +GFV + A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 294 IQNLNGELVHGQGIKIEAAK 353
+ +G+LV G+ +++ AK
Sbjct: 77 LDRTDGKLVDGRELRVTLAK 96
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 43.2 bits (97), Expect = 8e-05
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNG 311
++V N D L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 214
Query: 312 ELVHGQGIKIEAAKSRK 362
+ G +K+ +++K
Sbjct: 215 STIEGTDLKLHVCRAQK 231
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 42.3 bits (95), Expect = 1e-04
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = +3
Query: 174 KTTDADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVGRE-AIQNLNGELVHGQ 329
KTTD + FE GTVV C+I R +GFV M + VG + + + ++ G+
Sbjct: 183 KTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS--VGEQNKVLAIPQHMIDGR 240
Query: 330 GIKIEAAKSRKAPSTPT-TKIFVGNLTDK 413
++ R P+ ++IFVG LTDK
Sbjct: 241 RCDVKVPDGRDKQGRPSISRIFVGRLTDK 269
Score = 26.6 bits (56), Expect = 7.1
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLF----EKY-GTVVECDI-----VRNYGFVHMENEQVGREAI 296
+IFVG L+DK + LR +F + Y T V D+ R + FV + + + E I
Sbjct: 260 RIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAA-ERI 318
Query: 297 QNLNGELVHGQGIKIEAAKSRK 362
+ V+G + + A+ R+
Sbjct: 319 VSKGSLTVNGLSVGLSIAQPRE 340
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 41.9 bits (94), Expect = 2e-04
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Frame = +3
Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
P K+FVG + + + D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
+ A+ N+ +++ G ++ K + K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152
Score = 37.5 bits (83), Expect = 0.004
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
K+F+G LS K + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 32.7 bits (71), Expect = 0.11
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 305
+F+ +L D+DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 306 NGELVHGQGIKIEAAKSRKAP 368
NG + + +K++ R P
Sbjct: 561 NGFQIGSKRLKVQLKVDRGNP 581
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 41.9 bits (94), Expect = 2e-04
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Frame = +3
Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
P K+FVG + + + D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
+ A+ N+ +++ G ++ K + K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152
Score = 37.5 bits (83), Expect = 0.004
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
K+F+G LS K + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 32.7 bits (71), Expect = 0.11
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 305
+F+ +L D+DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 306 NGELVHGQGIKIEAAKSRKAP 368
NG + + +K++ R P
Sbjct: 561 NGFQIGSKRLKVQLKVDRGNP 581
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 41.9 bits (94), Expect = 2e-04
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Frame = +3
Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
P K+FVG + + + D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
+ A+ N+ +++ G ++ K + K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152
Score = 37.5 bits (83), Expect = 0.004
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
K+F+G LS K + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 32.7 bits (71), Expect = 0.11
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 305
+F+ +L D+DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 430 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 489
Query: 306 NGELVHGQGIKIEAAKSRKAP 368
NG + + +K++ R P
Sbjct: 490 NGFQIGSKRLKVQLKVDRGNP 510
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 41.9 bits (94), Expect = 2e-04
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Frame = +3
Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
P K+FVG + + + D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
+ A+ N+ +++ G ++ K + K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152
Score = 37.5 bits (83), Expect = 0.004
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
K+F+G LS K + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 41.9 bits (94), Expect = 2e-04
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Frame = +3
Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
P K+FVG + + + D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
+ A+ N+ +++ G ++ K + K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152
Score = 37.5 bits (83), Expect = 0.004
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
K+F+G LS K + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 41.9 bits (94), Expect = 2e-04
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Frame = +3
Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
P K+FVG + + + D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
+ A+ N+ +++ G ++ K + K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152
Score = 37.5 bits (83), Expect = 0.004
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
K+F+G LS K + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 41.9 bits (94), Expect = 2e-04
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Frame = +3
Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG-----------FVHMENE 275
P K+FVG + + + D R LFEKYG+V C+I+R+ F H ++
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 276 QVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTDK 413
+ A+ N+ +++ G ++ K + K+F+G L+ K
Sbjct: 110 IEAQGALHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKK 152
Score = 37.5 bits (83), Expect = 0.004
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
K+F+G LS K + +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 32.7 bits (71), Expect = 0.11
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 305
+F+ +L D+DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 306 NGELVHGQGIKIEAAKSRKAP 368
NG + + +K++ R P
Sbjct: 561 NGFQIGSKRLKVQLKVDRGNP 581
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 41.5 bits (93), Expect = 2e-04
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Frame = +3
Query: 105 AADVETKMPGAGT--FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN-------YGF 257
+A V +P + T + +FV NLS T D L LF ++G +V I+R+ Y F
Sbjct: 359 SASVAATLPPSDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAF 418
Query: 258 VHMENEQVGREAIQNLNGELVHGQGIKI 341
V M N A+ +LNG + G+ +++
Sbjct: 419 VSMSNYTEAYNAMLSLNGTNLAGKTLQV 446
Score = 35.9 bits (79), Expect = 0.012
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Frame = +3
Query: 132 GAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGR 287
G + + L T ++R LF G + C +VR+ YGFV+ E+
Sbjct: 38 GESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDAL 97
Query: 288 EAIQNLNGELVHGQGIKIEAAK 353
A+ + NG + + IK+ A+
Sbjct: 98 RAVSSFNGLRLQNKTIKVSYAR 119
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +3
Query: 135 AGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREA 293
AG IF+ NL + + F +G ++ C + + YGFVH E E + A
Sbjct: 142 AGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTA 201
Query: 294 IQNLNGELVHGQGIKI 341
I+ +NG L+ + + +
Sbjct: 202 IEKVNGMLLSDKKVYV 217
Score = 35.9 bits (79), Expect = 0.012
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 308
+FV N + L +F K+G + ++ + +GFV ++ +A++ LN
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN 299
Query: 309 GELVHGQGIKIEAAKSRK 362
++ G K+ +++K
Sbjct: 300 DSILEGTDCKLSVCRAQK 317
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +3
Query: 135 AGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREA 293
AG IF+ NL + + F +G ++ C + + YGFVH E E + A
Sbjct: 142 AGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTA 201
Query: 294 IQNLNGELVHGQGIKI 341
I+ +NG L+ + + +
Sbjct: 202 IEKVNGMLLSDKKVYV 217
Score = 35.9 bits (79), Expect = 0.012
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 308
+FV N + L +F K+G + ++ + +GFV ++ +A++ LN
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN 299
Query: 309 GELVHGQGIKIEAAKSRK 362
++ G K+ +++K
Sbjct: 300 DSILEGTDCKLSVCRAQK 317
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Frame = +3
Query: 117 ETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 272
++K+ F +FVG+LS + + LR F+ +G V + ++R+ YGFV
Sbjct: 13 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 72
Query: 273 EQVGREAIQNLNGE 314
+ AI+ +NG+
Sbjct: 73 REEAERAIEQMNGQ 86
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Frame = +3
Query: 117 ETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 272
++K+ F +FVG+LS + + LR F+ +G V + ++R+ YGFV
Sbjct: 23 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 82
Query: 273 EQVGREAIQNLNGE 314
+ AI+ +NG+
Sbjct: 83 REEAERAIEQMNGQ 96
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Frame = +3
Query: 117 ETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 272
++K+ F +FVG+LS + + LR F+ +G V + ++R+ YGFV
Sbjct: 126 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 185
Query: 273 EQVGREAIQNLNGE 314
+ AI+ +NG+
Sbjct: 186 REEAERAIEQMNGQ 199
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Frame = +3
Query: 117 ETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMEN 272
++K+ F +FVG+LS + + LR F+ +G V + ++R+ YGFV
Sbjct: 94 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 153
Query: 273 EQVGREAIQNLNGE 314
+ AI+ +NG+
Sbjct: 154 REEAERAIEQMNGQ 167
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Frame = +3
Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 299
F ++VGN +TT+ DL F + G V IV R + FV E + A+
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVD 63
Query: 300 NLNGELVHGQGIKIEAAKSR 359
NG +G+ +++ A++R
Sbjct: 64 QFNGVDFNGRALRVNLAQNR 83
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 40.7 bits (91), Expect = 4e-04
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
I+VG L +K +++ L L + G VV ++ ++ +GFV E+ AI+ L
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 306 NGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
N ++G+ IK+ A + + IFVGNL
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNL 107
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTV---------VECDIVRNYGFVHMENEQVGREAIQN 302
IFVGNL + + L F +G + V+ + + F++ + + A++
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Query: 303 LNGELVHGQGIKIEAAKSR 359
+NG+ + + I + A R
Sbjct: 162 MNGQFLCNRAITVSYAFKR 180
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 40.7 bits (91), Expect = 4e-04
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
I+VG L +K +++ L L + G VV ++ ++ +GFV E+ AI+ L
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 306 NGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
N ++G+ IK+ A + + IFVGNL
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNL 117
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTV---------VECDIVRNYGFVHMENEQVGREAIQN 302
IFVGNL + + L F +G + V+ + + F++ + + A++
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Query: 303 LNGELVHGQGIKIEAAKSR 359
+NG+ + + I + A R
Sbjct: 172 MNGQFLCNRAITVSYAFKR 190
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 40.3 bits (90), Expect = 5e-04
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
+FV L+ TTD DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 306 NGELVHGQGIKIEAAKS 356
+ L+ + I ++ ++S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 40.3 bits (90), Expect = 5e-04
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
+FV L+ TTD DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 306 NGELVHGQGIKIEAAKS 356
+ L+ + I ++ ++S
Sbjct: 303 DNVLIDDRRIHVDFSQS 319
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 40.3 bits (90), Expect = 5e-04
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
+FV L+ TTD DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 306 NGELVHGQGIKIEAAKS 356
+ L+ + I ++ ++S
Sbjct: 234 DNVLIDDRRIHVDFSQS 250
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQ 329
+++ N+ + T+ L LF++Y ++ V++Y F+H +A++ NG+ + G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438
Query: 330 GIKIEAAK 353
++ AK
Sbjct: 439 VVEASLAK 446
Score = 33.1 bits (72), Expect = 0.082
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Frame = +3
Query: 129 PGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVG 284
P +I+VG++ + L PLFEK G + + ++ R Y FV N++
Sbjct: 195 PAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDA 254
Query: 285 REAIQNLNG-ELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
A + +G E+ G+ +K+ S T++F+GN+
Sbjct: 255 AAAAKTYDGHEISTGKPLKVNV-------SIANTRLFIGNI 288
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Frame = +3
Query: 156 VGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNG 311
V NLS TT+ DLR +F ++G + +CD+V R +GF++ + A L
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 312 ELVHGQGIKIEAAKSRKAPSTPTTKIFVGN 401
+ G I+++ + +++ S PT ++G+
Sbjct: 140 TDLDGHKIRVDFSLTKRGHS-PTPGQYMGD 168
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 39.1 bits (87), Expect = 0.001
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 132 GAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQ 299
G+ K++VGNL + ++ +F KYG + DI G FV E+ + +A++
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 300 NLNGELVHGQGIKIE 344
+G G+ I++E
Sbjct: 65 ARDGYEFDGRRIRVE 79
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 39.1 bits (87), Expect = 0.001
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 132 GAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQ 299
G+ K++VGNL + ++ +F KYG + DI G FV E+ + +A++
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 300 NLNGELVHGQGIKIE 344
+G G+ I++E
Sbjct: 65 ARDGYEFDGRRIRVE 79
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = +3
Query: 135 AGTFKIFVGNLSDKTTDADLRPLFEKYGTV----VECD----IVRNYGFVHMENEQVGRE 290
+G F ++VGN +TT+ +L F G + + CD R + F+ E +
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 291 AIQNLNGELVHGQGIKIEAA 350
A++ +NG +G+ +++ A
Sbjct: 62 AVEQMNGAEFNGRPLRVNLA 81
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Frame = +3
Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQ 299
F +FVG+L + LR F K+G V E I+R+ YGFV + AI
Sbjct: 132 FHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAID 191
Query: 300 NLNG 311
+NG
Sbjct: 192 EMNG 195
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 37.9 bits (84), Expect = 0.003
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHME-NEQVGREAIQNL 305
KIFVG +S + + DL F +YG V + + R+ GF +E G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 306 NGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
+ + G+ ++++ AKSR+ K+FVG L
Sbjct: 90 REQTIKGKSVEVKPAKSRE-----NKKVFVGGL 117
Score = 30.3 bits (65), Expect = 0.58
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECD--------IVRNYGFVHMENEQVGREA 293
K+FVG L ++ DLR FE++G V + + RN+ F+ E E+ +A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.003
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIV------RNYGFVHME-NEQVGREAIQNL 305
KIFVG +S + + DL F +YG V + + R+ GF +E G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 306 NGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNL 404
+ + G+ ++++ AKSR+ K+FVG L
Sbjct: 90 REQTIKGKSVEVKPAKSRE-----NKKVFVGGL 117
Score = 30.3 bits (65), Expect = 0.58
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECD--------IVRNYGFVHMENEQVGREA 293
K+FVG L ++ DLR FE++G V + + RN+ F+ E E+ +A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 37.5 bits (83), Expect = 0.004
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQN 302
KIFVG L T+D L FE++G + E ++ R YGFV M++ A ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 303 LNGELVHGQGIKIEAAKSRKAPST 374
N ++ G+ + A P T
Sbjct: 96 PN-PIIDGRKANVNLAYLGAKPRT 118
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 37.1 bits (82), Expect = 0.005
Identities = 19/81 (23%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNL 305
I++G LS ++ D+ +F +YG V+ +++R+ + F+ ++++ A+ N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 306 NGELVHGQGIKIEAAKSRKAP 368
NG +H + I+++ + K P
Sbjct: 100 NGISLHKRMIRVDHVEEYKVP 120
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Frame = +3
Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 299
F+++V ++ ++ DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 300 NLNGELVHGQGIKI 341
+N + GQ +++
Sbjct: 267 GMNMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Frame = +3
Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 299
F+++V ++ ++ DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 300 NLNGELVHGQGIKI 341
+N + GQ +++
Sbjct: 267 GMNMFDLGGQYLRV 280
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.012
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Frame = +3
Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQ 299
F+++V ++ ++ DL+ +FE +G +V+C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 300 NLNGELVHGQGIK 338
+N + GQ ++
Sbjct: 267 GMNMFDLGGQYLR 279
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 35.5 bits (78), Expect = 0.015
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 201 LFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNGELVHGQGIKIEAAKSR 359
+FEK G VV+ +I+ N +GFV M+N A NG + G+ +++ A R
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 35.5 bits (78), Expect = 0.015
Identities = 20/82 (24%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Frame = +3
Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAI 296
T K+F+G LS +T D++ FE YG V + ++ R +GFV ++++V + +
Sbjct: 133 TKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA-DKV 191
Query: 297 QNLNGELVHGQGIKIEAAKSRK 362
++ ++G+ ++ + A+ ++
Sbjct: 192 CEIHFHEINGKMVECKKAQPKE 213
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 35.5 bits (78), Expect = 0.015
Identities = 20/82 (24%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Frame = +3
Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAI 296
T K+F+G LS +T D++ FE YG V + ++ R +GFV ++++V + +
Sbjct: 133 TKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA-DKV 191
Query: 297 QNLNGELVHGQGIKIEAAKSRK 362
++ ++G+ ++ + A+ ++
Sbjct: 192 CEIHFHEINGKMVECKKAQPKE 213
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 35.1 bits (77), Expect = 0.020
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDI--------VRNYGFVHMENEQVGREAIQNL 305
+FV N+ ++ T+ D+ F +YG + + ++ Y V E ++ EAI
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 306 NGELVHGQGIKIE 344
N + GQ +K++
Sbjct: 117 NDTDLLGQNVKVD 129
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 34.7 bits (76), Expect = 0.027
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 111 DVETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVEC 233
D K G ++FVGNL ++ + +L+ LF +G + EC
Sbjct: 105 DEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC 145
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 34.7 bits (76), Expect = 0.027
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIV---------RNYGFVHMENEQVGREAIQ 299
++ + NLS L +F YG + D+ R YG+V +N + ++I+
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 300 NLNGELVHGQGIKIEAAKSRKA 365
+++G + G + +E R++
Sbjct: 194 HMDGGQIDGMAVHVEMTIGRQS 215
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 34.7 bits (76), Expect = 0.027
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Frame = +3
Query: 114 VETKMPGAGTFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHME 269
+ T P ++VG ++ T+ L F +G VV I R +GFV +
Sbjct: 1 MNTNFPHNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
Query: 270 NEQVGREAIQNLNGELVHGQGIKIEAAKSRKA 365
+ AI N+N + G+ I++ A+ KA
Sbjct: 61 MAEDAAMAIDNMNESELFGKTIRVNFARPPKA 92
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 34.7 bits (76), Expect = 0.027
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVH 263
K+F+G LS TTD L F ++G VV+ ++R+ H
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 88
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 34.7 bits (76), Expect = 0.027
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVH 263
K+F+G LS TTD L F ++G VV+ ++R+ H
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 108
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 34.7 bits (76), Expect = 0.027
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYGFVH 263
K+F+G LS TTD L F ++G VV+ ++R+ H
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 109
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 34.7 bits (76), Expect = 0.027
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Frame = +3
Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVR--------NYGFVHMENEQVGREAIQ 299
F++F G+L ++ +D L F KY + + +VR YGFV + + A++
Sbjct: 203 FRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMR 262
Query: 300 NLNGELVHGQGIKI 341
++G+ V + IK+
Sbjct: 263 EMDGKYVGNRPIKL 276
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.035
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 290
+IFVG TT+ +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 121
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 34.3 bits (75), Expect = 0.035
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 290
+IFVG TT+ +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 122
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 33.1 bits (72), Expect = 0.082
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLN 308
+FVG ++ +T+++ LR FE YG + + +V R Y F+ ++ A + +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165
Query: 309 GELVHGQGIKIEAAKSR 359
G V G+ + ++ + R
Sbjct: 166 GIKVDGKRLVVDYERGR 182
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 32.7 bits (71), Expect = 0.11
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVEC----DIVRN----YGFVHMENEQVGREAIQNL 305
+F+ +L D+DL F +G ++ D V N +GFV EN Q AI +
Sbjct: 337 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 396
Query: 306 NGELVHGQGIKIEAAKSRKAP 368
NG + + +K++ R P
Sbjct: 397 NGFQIGSKRLKVQLKVDRGNP 417
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 32.7 bits (71), Expect = 0.11
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGT-VVECDIVRNYGFVHMENEQVGREAIQNLNGELVHG 326
+FV +S D +L F VV+C + YGFV + ++ I ++G+ ++G
Sbjct: 98 VFVRGISRDMPDTELYQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMDGKTLNG 157
Query: 327 QGIKIEAAK 353
+ I + A+
Sbjct: 158 KLISVSWAR 166
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 32.3 bits (70), Expect = 0.14
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
K+FVG + + DLR LFE++G + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 305
+F+ +L + DA+L +F +G +V + + +GFV +N + AI +
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 306 NGELVHGQGIKIEAAKSR 359
NG + + +K++ + R
Sbjct: 491 NGFQIGMKRLKVQLKRPR 508
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 32.3 bits (70), Expect = 0.14
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVR 245
KI V N+S K T + L+ F +YG + C + R
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 32.3 bits (70), Expect = 0.14
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
K+FVG + + DLR LFE++G + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNL 305
+F+ +L + DA+L +F +G +V + + +GFV +N + AI +
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 306 NGELVHGQGIKIEAAKSR 359
NG + + +K++ + R
Sbjct: 491 NGFQIGMKRLKVQLKRPR 508
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 31.9 bits (69), Expect = 0.19
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = +3
Query: 114 VETKMPGAGTFK-IFVGNLSDKTTDADLRPLFE-----KYGTVVECDIV-RNYGFVHMEN 272
V+ PG + IFV NL TT+ ++R E ++ D+V R + +V MEN
Sbjct: 582 VQKAAPGTEDARTIFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMEN 641
Query: 273 EQVGREAI 296
+Q ++A+
Sbjct: 642 DQKAQQAL 649
Score = 31.9 bits (69), Expect = 0.19
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTV 224
K+FV N+ + TD +L+ LF K+GTV
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTV 709
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
KIFVG L+ TTD +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
KIFVG L+ TTD +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 147 KIFVGNLSDKTTDADLRPLFEKYGTVVECDIVRN 248
KIFVG L+ TTD +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 31.5 bits (68), Expect = 0.25
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Frame = +3
Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDI-------VRNYGFVHMENEQVGREAIQ 299
T ++ V NL T+ LR FEKYG + + + R + FV +E A+
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 300 NLNGELVHGQGIKIEAAK 353
N + + + +E +
Sbjct: 62 KSNQTFFNSKKLTVEECR 79
Score = 31.5 bits (68), Expect = 0.25
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDIV 242
T ++F+ NL T + DL+ LF+KYG V E +V
Sbjct: 278 TGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVV 311
Score = 30.3 bits (65), Expect = 0.58
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 15/87 (17%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEK-YGTVVEC--------------DIVRNYGFVHMENEQVG 284
+FV NL+ TTD L LF K YG +V+ + +GFV
Sbjct: 643 LFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFYTAFDA 702
Query: 285 REAIQNLNGELVHGQGIKIEAAKSRKA 365
+ A++++ GEL+ G ++++ + A
Sbjct: 703 KTALKDMQGELLDGHSLELKISHRENA 729
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 31.5 bits (68), Expect = 0.25
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDI 239
T +FVGN+ + ++R +FE++G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.25
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDI 239
T +FVGN+ + ++R +FE++G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 31.5 bits (68), Expect = 0.25
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 141 TFKIFVGNLSDKTTDADLRPLFEKYGTVVECDI 239
T +FVGN+ + ++R +FE++G V E DI
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 177
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTV 224
+FVGN+SDK +D +R + + G V
Sbjct: 49 VFVGNISDKCSDEFIRKILNECGNV 73
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTV 224
+FVGN+SDK +D +R + + G V
Sbjct: 49 VFVGNISDKCSDEFIRKILNECGNV 73
>AF016452-14|AAB66020.1| 409|Caenorhabditis elegans Hypothetical
protein T05H4.15a protein.
Length = 409
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 264 CGRNRNF*RYRILRPYRTFRIAV*DQRLSFYRIG 163
CGR Y ++ PY + +++ D R+S Y G
Sbjct: 360 CGRGDCLQVYSLIDPYESLTLSIMDDRISIYATG 393
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 243 RNYGFVHMENEQVGREAIQNLNGELVHGQGIKIEAAKSR 359
+ + +V ENEQ AI LNG + +K+ A+ R
Sbjct: 53 KGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQR 91
>AF100307-1|ABB88211.1| 317|Caenorhabditis elegans Hypothetical
protein T12B5.6b protein.
Length = 317
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 267 ENEQVGREAIQNLNGELVHGQGIKIEAAKSRKAPSTPTTKIFVGNLTD 410
EN+ I N +L+ G+ +AAK K S KI + N T+
Sbjct: 85 ENDSSSSNVIHNEQTKLIDGENFVEKAAKDFKILSKHARKIAIRNFTE 132
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 26.6 bits (56), Expect = 7.1
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Frame = +3
Query: 144 FKIFVGNLSDKTTDADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVGREAIQN 302
F + V ++ D DA+L +F+KY + + R GFV N+ + A+
Sbjct: 156 FNLHVSSVPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVE 215
Query: 303 LNGELVHGQGIKIEAAKSR 359
++ V G I ++ A SR
Sbjct: 216 MHRTKVGGCRIILKLAGSR 234
>Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 26.2 bits (55), Expect = 9.4
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQNLNGEL 317
+FV NLS + + LR +F+ + + G FV + Q +A+ +L G
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQ 289
Query: 318 VHGQ---GIKIEAAKSRKA 365
+ G++IE A+++ A
Sbjct: 290 ITANDRGGLRIEYARNKMA 308
>Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 26.2 bits (55), Expect = 9.4
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQNLNGEL 317
+FV NLS + + LR +F+ + + G FV + Q +A+ +L G
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQ 289
Query: 318 VHGQ---GIKIEAAKSRKA 365
+ G++IE A+++ A
Sbjct: 290 ITANDRGGLRIEYARNKMA 308
>X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 26.2 bits (55), Expect = 9.4
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQNLNGEL 317
+FV NLS + + LR +F+ + + G FV + Q +A+ +L G
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQ 289
Query: 318 VHGQ---GIKIEAAKSRKA 365
+ G++IE A+++ A
Sbjct: 290 ITANDRGGLRIEYARNKMA 308
>X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 26.2 bits (55), Expect = 9.4
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +3
Query: 150 IFVGNLSDKTTDADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQNLNGEL 317
+FV NLS + + LR +F+ + + G FV + Q +A+ +L G
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQ 289
Query: 318 VHGQ---GIKIEAAKSRKA 365
+ G++IE A+++ A
Sbjct: 290 ITANDRGGLRIEYARNKMA 308
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 512 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 546
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 545
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 514 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 548
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 545
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 512 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 546
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 514 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 548
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 545
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 512 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 546
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 201 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 305
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 545
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,068,725
Number of Sequences: 27780
Number of extensions: 146532
Number of successful extensions: 541
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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