Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A21
         (350 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   1.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   3.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   4.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   6.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   8.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   8.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    20   8.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    20   8.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    20   8.5  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 191 TLMRLPTISAGNTRSSNMASYTEVSVLERGLFC*L-ATRVLWLGLGRILRS 340
           TL     + A N          +++VLE G FC +   R L +G+ R +++
Sbjct: 527 TLSNTSLLGAANQLEELNLKNIDLTVLESGAFCKMQPLRTLKIGVYRNIKN 577


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 115 VNLVFNSCLLVF 150
           VNL+FN+C  VF
Sbjct: 64  VNLIFNTCGEVF 75


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 146 FLSRCTLMSCEPSSFTLM 199
           FLSRC L+S   + +TL+
Sbjct: 679 FLSRCRLLSERLTRWTLI 696


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 189 KLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKK 91
           K+D +Q+     D+   TT+   V+  Q   KK
Sbjct: 424 KVDPTQVESEEEDEETSTTVFSNVEVVQEEAKK 456


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 220  REYQIFQYGVIYRSQCPGTGPFLLV 294
            +E+   +YGVIY    P     L++
Sbjct: 997  QEFNCLKYGVIYYVTVPSMYLLLVI 1021


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 220  REYQIFQYGVIYRSQCPGTGPFLLV 294
            +E+   +YGVIY    P     L++
Sbjct: 997  QEFNCLKYGVIYYVTVPSMYLLLVI 1021


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 302 RVLWLGLGRILRSPTN 349
           RVLWL L  +L+   N
Sbjct: 228 RVLWLSLSDLLQKMGN 243


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 302 RVLWLGLGRILRSPTN 349
           RVLWL L  +L+   N
Sbjct: 228 RVLWLSLSDLLQKMGN 243


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 302 RVLWLGLGRILRSPTN 349
           RVLWL L  +L+   N
Sbjct: 228 RVLWLSLSDLLQKMGN 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,810
Number of Sequences: 336
Number of extensions: 2009
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)