BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_A21 (350 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_02_0683 + 10363963-10364037,10364112-10364185,10364312-103644... 105 1e-23 05_03_0610 - 16167557-16167679,16168236-16168418,16169291-161694... 103 4e-23 02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679 31 0.19 06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 30 0.59 12_01_0191 + 1413287-1413346,1413504-1413632,1416819-1416998,141... 29 0.78 02_02_0312 + 8855664-8855807,8856402-8856465,8858399-8858547,885... 28 2.4 11_02_0078 - 8074247-8074837,8075815-8076341,8076453-8077022,807... 27 3.1 06_01_0209 + 1587656-1587876,1587964-1588055,1590520-1590545,159... 27 5.5 08_02_0396 - 16654603-16655030,16655803-16655906,16655988-166565... 26 7.2 08_02_1547 + 27795664-27795674,27795743-27795892,27796182-277979... 26 9.6 05_04_0262 - 19514426-19515625 26 9.6 >03_02_0683 + 10363963-10364037,10364112-10364185,10364312-10364435, 10365047-10365229,10365478-10365600 Length = 192 Score = 105 bits (252), Expect = 1e-23 Identities = 48/96 (50%), Positives = 73/96 (76%) Frame = -3 Query: 345 VGDRKILPKPSHKTRVAN*QKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLI 166 V R+I+ P + V +RPR+RTLT+V+D ILED+V+PAEIVGKRIR +LDG+++I Sbjct: 96 VATRRIVRPPKKGSAV----QRPRTRTLTAVHDGILEDVVYPAEIVGKRIRYRLDGAKVI 151 Query: 165 KVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFP 58 K+ LD ++ E+K++TF +VY++L G++V FE+P Sbjct: 152 KIFLDPKERNNTEYKLETFSAVYRRLCGKDVAFEYP 187 >05_03_0610 - 16167557-16167679,16168236-16168418,16169291-16169414, 16169514-16169626,16169668-16169742 Length = 205 Score = 103 bits (247), Expect = 4e-23 Identities = 47/96 (48%), Positives = 70/96 (72%) Frame = -3 Query: 345 VGDRKILPKPSHKTRVAN*QKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLI 166 V R+I+ P + V RPR+RTLT+V+D ILED+V+PAEIVGKR+R LDG +++ Sbjct: 109 VATRRIVRPPKKGSAVV----RPRTRTLTAVHDGILEDVVYPAEIVGKRVRYHLDGRKIM 164 Query: 165 KVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFP 58 K+ LD ++ E+K+DTF SVY++L G++V F++P Sbjct: 165 KIFLDPKERNNTEYKLDTFSSVYRRLCGKDVVFDYP 200 >02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679 Length = 129 Score = 31.5 bits (68), Expect = 0.19 Identities = 13/25 (52%), Positives = 19/25 (76%) Frame = -3 Query: 279 PRSRTLTSVYDAILEDLVFPAEIVG 205 PR+RTL +V+D ILED+V ++G Sbjct: 99 PRTRTLITVHDGILEDVVSQLRLLG 123 >06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234, 7631502-7631591,7631680-7631845,7632225-7633191, 7633402-7633591,7633908-7634048,7634416-7634736 Length = 791 Score = 29.9 bits (64), Expect = 0.59 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -3 Query: 228 VFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHK 121 +FPA I G + KLD ++L K H D+ + ++HK Sbjct: 589 IFPARIGGYLLDSKLDRNEL-KKHFDQTRANRLDHK 623 >12_01_0191 + 1413287-1413346,1413504-1413632,1416819-1416998, 1417747-1417938,1418533-1418673,1418785-1418912, 1419088-1419262,1419664-1419852,1420628-1420749, 1420829-1420874 Length = 453 Score = 29.5 bits (63), Expect = 0.78 Identities = 15/39 (38%), Positives = 25/39 (64%) Frame = -3 Query: 279 PRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIK 163 P +RTLT+ +D IL+D + A+I GK + + + +IK Sbjct: 86 PNTRTLTNAHDGILDD-INCAQIAGKHVGDHSNCANVIK 123 >02_02_0312 + 8855664-8855807,8856402-8856465,8858399-8858547, 8859258-8859674 Length = 257 Score = 27.9 bits (59), Expect = 2.4 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +1 Query: 70 SHFAPRQLLVYRLEGVNLVFNS 135 +H A +++L ++GVNLVFNS Sbjct: 59 AHCASKEILSSSIDGVNLVFNS 80 >11_02_0078 - 8074247-8074837,8075815-8076341,8076453-8077022, 8077725-8077752 Length = 571 Score = 27.5 bits (58), Expect = 3.1 Identities = 25/78 (32%), Positives = 37/78 (47%) Frame = +2 Query: 92 FLYTDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISAGNTRSSNMASYTEVSVL 271 FL +D +CS + F+ C L E F L+ TI+ + MA+ T + Sbjct: 463 FLISD--TLAMCSSLAVAFV--CILSRSEDLEF-LLYYRTITRNLMWLAYMATTTAFAT- 516 Query: 272 ERGLFC*LATRVLWLGLG 325 GL+ LA R+LWL +G Sbjct: 517 --GLYTVLAPRILWLAIG 532 >06_01_0209 + 1587656-1587876,1587964-1588055,1590520-1590545, 1591130-1591370,1591459-1591554,1591639-1591754, 1591837-1591917,1592597-1592720,1593222-1593271, 1593735-1593825,1594386-1594421,1594502-1594602, 1594684-1594800 Length = 463 Score = 26.6 bits (56), Expect = 5.5 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Frame = -3 Query: 222 PAEIVGKRIRVKLDG-SQLIKVHLDK 148 PA +VG+R+ VKL G +L K +DK Sbjct: 10 PAAVVGERVAVKLRGYFELAKEEIDK 35 >08_02_0396 - 16654603-16655030,16655803-16655906,16655988-16656579, 16656820-16656993,16657105-16657309 Length = 500 Score = 26.2 bits (55), Expect = 7.2 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -3 Query: 150 KNQQTTIEHKVDTFQSVYKKL 88 KNQ+ +I HKVDT +KL Sbjct: 188 KNQRASISHKVDTVSKESEKL 208 >08_02_1547 + 27795664-27795674,27795743-27795892,27796182-27797906, 27799447-27799546,27799657-27800268,27800399-27800521, 27800905-27801039,27801108-27801209,27801716-27801778, 27801854-27802045,27802121-27802258,27802632-27802694, 27803068-27803466 Length = 1270 Score = 25.8 bits (54), Expect = 9.6 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +1 Query: 220 REYQIFQYGVIYRSQCPGTGPFLLVGYTCLVAGLGQ 327 R + +F+ G I CP T PF+ Y LV + Q Sbjct: 798 RRFVLFEIGYIL---CPTTKPFVSSNYLALVKDINQ 830 >05_04_0262 - 19514426-19515625 Length = 399 Score = 25.8 bits (54), Expect = 9.6 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = -2 Query: 88 DGARSDF-RVPRTLLVNLDTILQ 23 DG R F R+PR LLV+LD ++ Sbjct: 172 DGIRRGFSRIPRALLVSLDNCMR 194 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,434,427 Number of Sequences: 37544 Number of extensions: 211817 Number of successful extensions: 535 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 526 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 535 length of database: 14,793,348 effective HSP length: 73 effective length of database: 12,052,636 effective search space used: 518263348 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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