Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A21
(350 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 161 6e-40
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 161 6e-40
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 161 6e-40
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 161 6e-40
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 161 6e-40
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 161 6e-40
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 2e-19
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 32 0.59
BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat tra... 30 2.4
BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat tra... 30 2.4
AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat tra... 30 2.4
AK128780-1|BAC87609.1| 259|Homo sapiens protein ( Homo sapiens ... 30 2.4
AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. 30 2.4
M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1 s... 28 9.5
M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D ... 28 9.5
BC013983-1|AAH13983.1| 433|Homo sapiens sparc/osteonectin, cwcv... 28 9.5
BC003017-1|AAH03017.1| 433|Homo sapiens sparc/osteonectin, cwcv... 28 9.5
BC000460-1|AAH00460.1| 433|Homo sapiens sparc/osteonectin, cwcv... 28 9.5
AY358973-1|AAQ89332.1| 436|Homo sapiens HSAJ1454 protein. 28 9.5
AY160217-1|AAO17576.1| 577|Homo sapiens xenobiotic/medium-chain... 28 9.5
AK075495-1|BAC11652.1| 153|Homo sapiens protein ( Homo sapiens ... 28 9.5
AJ001454-1|CAA04775.1| 436|Homo sapiens testican-3 protein. 28 9.5
AB073604-1|BAD38642.1| 577|Homo sapiens putative protein produc... 28 9.5
AB056866-1|BAB64908.1| 313|Homo sapiens testican 3 splicing var... 28 9.5
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 161 bits (391), Expect = 6e-40
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -3
Query: 348 FVGDRKILPKPSHKTRVAN*QKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQL 169
F+ R+ILPKP+ K+R N QKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+L
Sbjct: 94 FIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRL 153
Query: 168 IKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 55
IKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 154 IKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 161 bits (391), Expect = 6e-40
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -3
Query: 348 FVGDRKILPKPSHKTRVAN*QKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQL 169
F+ R+ILPKP+ K+R N QKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+L
Sbjct: 92 FIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRL 151
Query: 168 IKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 55
IKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 152 IKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 189
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 161 bits (391), Expect = 6e-40
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -3
Query: 348 FVGDRKILPKPSHKTRVAN*QKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQL 169
F+ R+ILPKP+ K+R N QKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+L
Sbjct: 94 FIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRL 153
Query: 168 IKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 55
IKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 154 IKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 161 bits (391), Expect = 6e-40
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -3
Query: 348 FVGDRKILPKPSHKTRVAN*QKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQL 169
F+ R+ILPKP+ K+R N QKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+L
Sbjct: 94 FIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRL 153
Query: 168 IKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 55
IKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 154 IKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 161 bits (391), Expect = 6e-40
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -3
Query: 348 FVGDRKILPKPSHKTRVAN*QKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQL 169
F+ R+ILPKP+ K+R N QKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+L
Sbjct: 94 FIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRL 153
Query: 168 IKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 55
IKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 154 IKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 161 bits (391), Expect = 6e-40
Identities = 74/98 (75%), Positives = 86/98 (87%)
Frame = -3
Query: 348 FVGDRKILPKPSHKTRVAN*QKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQL 169
F+ R+ILPKP+ K+R N QKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+L
Sbjct: 94 FIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRL 153
Query: 168 IKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 55
IKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 154 IKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 93.5 bits (222), Expect = 2e-19
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = -3
Query: 273 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 118
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 31.9 bits (69), Expect = 0.59
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 101 TDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISAGNTRSSNMASYTEVSVLERG 280
T W ++ LCS++ W L CT + P L+ L T+S+ +S A +L++
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD 322
Query: 281 L 283
L
Sbjct: 323 L 323
>BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -3
Query: 177 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 94
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -3
Query: 177 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 94
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat
transmembrane neuronal 2 protein protein.
Length = 516
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -3
Query: 177 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 94
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AK128780-1|BAC87609.1| 259|Homo sapiens protein ( Homo sapiens
cDNA FLJ45445 fis, clone BRSSN2013696. ).
Length = 259
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 204 CQQSRPGIPDLPIWRHIQKSVSWNGAFSVSWLHVSCGWAWAGSYGHQR 347
C + RPG+ L H+Q + +G S S LH+ G W S QR
Sbjct: 200 CGRQRPGLLKLASQTHLQPPGAPSGPSSSSRLHLQAG-LWPDSRSQQR 246
>AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein.
Length = 529
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -3
Query: 177 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 94
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 98 SQLTWLHLDHNQISTV--KEDAFQGLYK 123
>M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1
subunit protein.
Length = 2181
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +2
Query: 71 VTSRPVNFLYTDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISAGNTRSSNMAS 250
+ +P + W +T S++V + L +P+ + +PT + GN+ SN S
Sbjct: 1277 IAFKPKGYFSDAW--NTFDSLIVIGSIIDVALSEADPTESENVPVPTATPGNSEESNRIS 1334
Query: 251 YT 256
T
Sbjct: 1335 IT 1336
>M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D
subunit protein.
Length = 2161
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +2
Query: 71 VTSRPVNFLYTDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISAGNTRSSNMAS 250
+ +P + W +T S++V + L +P+ + +PT + GN+ SN S
Sbjct: 1257 IAFKPKGYFSDAW--NTFDSLIVIGSIIDVALSEADPTESENVPVPTATPGNSEESNRIS 1314
Query: 251 YT 256
T
Sbjct: 1315 IT 1316
>BC013983-1|AAH13983.1| 433|Homo sapiens sparc/osteonectin, cwcv
and kazal-like domains proteoglycan (testican) 3
protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 282 RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 133
RP RSR TS+ + L + + + LD S+L ++LDKN+Q T
Sbjct: 232 RPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCT 282
>BC003017-1|AAH03017.1| 433|Homo sapiens sparc/osteonectin, cwcv
and kazal-like domains proteoglycan (testican) 3
protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 282 RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 133
RP RSR TS+ + L + + + LD S+L ++LDKN+Q T
Sbjct: 232 RPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCT 282
>BC000460-1|AAH00460.1| 433|Homo sapiens sparc/osteonectin, cwcv
and kazal-like domains proteoglycan (testican) 3
protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 282 RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 133
RP RSR TS+ + L + + + LD S+L ++LDKN+Q T
Sbjct: 232 RPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCT 282
>AY358973-1|AAQ89332.1| 436|Homo sapiens HSAJ1454 protein.
Length = 436
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 282 RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 133
RP RSR TS+ + L + + + LD S+L ++LDKN+Q T
Sbjct: 235 RPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCT 285
>AY160217-1|AAO17576.1| 577|Homo sapiens xenobiotic/medium-chain
fatty acid:CoA ligase protein.
Length = 577
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 101 TDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISAGNTRSSNMASYTEVSVLERG 280
T W ++ L S++ W L CT + P L+ L T+S+ +S A +L++
Sbjct: 263 TGWILNILGSLLESWTLGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD 322
Query: 281 L 283
L
Sbjct: 323 L 323
>AK075495-1|BAC11652.1| 153|Homo sapiens protein ( Homo sapiens
cDNA PSEC0192 fis, clone HEMBA1000675. ).
Length = 153
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 12 FYFYCK-IVSKFTSKVRGTRKSLRAPSTSCIQTGRCQPCVQ*LSVG 146
F FY + + K+T V+ KS A S SC C C+ +S+G
Sbjct: 86 FIFYLRNMKKKYTKMVKLLHKSAPAQSDSCKCPFICCVCISRISIG 131
>AJ001454-1|CAA04775.1| 436|Homo sapiens testican-3 protein.
Length = 436
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 282 RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 133
RP RSR TS+ + L + + + LD S+L ++LDKN+Q T
Sbjct: 235 RPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCT 285
>AB073604-1|BAD38642.1| 577|Homo sapiens putative protein product
of HYST1046 protein.
Length = 577
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 101 TDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISAGNTRSSNMASYTEVSVLERG 280
T W ++ L S++ W L CT + P L+ L T+S+ +S A +L++
Sbjct: 263 TGWILNILGSLLESWTLGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD 322
Query: 281 L 283
L
Sbjct: 323 L 323
>AB056866-1|BAB64908.1| 313|Homo sapiens testican 3 splicing
variant protein.
Length = 313
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 282 RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 133
RP RSR TS+ + L + + + LD S+L ++LDKN+Q T
Sbjct: 232 RPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCT 282
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,585,796
Number of Sequences: 237096
Number of extensions: 1183682
Number of successful extensions: 3161
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3152
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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