Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A20
         (395 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.63 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   2.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   2.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   2.5  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   5.9  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       20   7.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 0.63
 Identities = 8/38 (21%), Positives = 20/38 (52%)
 Frame = +2

Query: 125 KTYKNVADKSFSDIILFCLDIQLTQDSDLSTKICLTCH 238
           KT  N+ +  ++  ++   D + ++  + +  IC+ CH
Sbjct: 202 KTINNILENLWAKKLIVVKDKKKSRSDEQTIDICMRCH 239


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 83   LCTSPTFSITIQRLKARD 30
            LC+ P   +T+  L++RD
Sbjct: 1323 LCSKPIDEMTVDELRSRD 1340


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 83   LCTSPTFSITIQRLKARD 30
            LC+ P   +T+  L++RD
Sbjct: 1323 LCSKPIDEMTVDELRSRD 1340


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = -3

Query: 255 NAMVFLWHVRHIFVLKSESCVN 190
           NA+   W + H+F ++  + +N
Sbjct: 446 NALCMTWLMDHVFAIREAATLN 467


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -1

Query: 164 YQKNFYQPHFYKFLHHKYLF 105
           Y   +Y P++Y++L +  L+
Sbjct: 33  YCDPWYNPYYYQYLQNAALY 52


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -3

Query: 93 LRHTLHQSNIFNNHSK 46
          L H +HQ+ I++N+ +
Sbjct: 42 LHHPIHQTVIYHNNPR 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,460
Number of Sequences: 336
Number of extensions: 2005
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)