Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A19
(390 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.4
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.4
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.4
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.4
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.4
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 1.4
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 21 3.3
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 21 4.3
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 4.3
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 5.7
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 20 7.5
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 20 10.0
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 20 10.0
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 20 10.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 20 10.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 20 10.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 20 10.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 20 10.0
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.4
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -2
Query: 272 WFPLPDHHC 246
WFP D HC
Sbjct: 134 WFPFDDQHC 142
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.4
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -2
Query: 272 WFPLPDHHC 246
WFP D HC
Sbjct: 134 WFPFDDQHC 142
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.4
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -2
Query: 272 WFPLPDHHC 246
WFP D HC
Sbjct: 134 WFPFDDQHC 142
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.4
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -2
Query: 272 WFPLPDHHC 246
WFP D HC
Sbjct: 134 WFPFDDQHC 142
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.4
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -2
Query: 272 WFPLPDHHC 246
WFP D HC
Sbjct: 134 WFPFDDQHC 142
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 83 SSHWETQRDAELRSRGTTTSS 21
++HW+T+ +R TTT S
Sbjct: 1180 TNHWQTKTTTSTTTRPTTTVS 1200
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 21.4 bits (43), Expect = 3.3
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 201 WPQSCHQNQQLVTCSDDP 148
WP++ Q+ C+DDP
Sbjct: 143 WPENVDGCQKHPLCNDDP 160
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 21.0 bits (42), Expect = 4.3
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +3
Query: 135 VQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 257
+QG + G+ ++ VKK KPE+ + A ++
Sbjct: 144 IQGTASEATLVALLGAKARMIDRVKKEKPEMSDSEIVAKLV 184
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 130 ITYRFFAPVLSAQLITAPTGRP 65
I RF + + A L+T+P RP
Sbjct: 225 IVERFTSDRVHAALVTSPRARP 246
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 20.6 bits (41), Expect = 5.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 329 HDDPRIILEIYEHPVPPSK 273
H++ + IY HP PSK
Sbjct: 92 HEEAQSPHRIYMHPESPSK 110
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 256 SGSGNHLEGGTGCSYISRIM 315
SGSGN+ G S++S ++
Sbjct: 529 SGSGNNQPPGGPSSHVSAVL 548
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 19.8 bits (39), Expect = 10.0
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +2
Query: 23 RTWWFRGSEVPHLAGSPSG 79
R WW R V ++ + SG
Sbjct: 72 RPWWERYQPVSYILNTRSG 90
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 19.8 bits (39), Expect = 10.0
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +2
Query: 23 RTWWFRGSEVPHLAGSPSG 79
R WW R V ++ + SG
Sbjct: 73 RPWWERYQPVSYILNTRSG 91
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 19.8 bits (39), Expect = 10.0
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +2
Query: 23 RTWWFRGSEVPHLAGSPSG 79
R WW R V ++ + SG
Sbjct: 73 RPWWERYQPVSYILNTRSG 91
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 19.8 bits (39), Expect = 10.0
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 95 TIDHSSHWETQRDAELRSRG 36
TID S H +R SRG
Sbjct: 1154 TIDPSGHISRRRSMSASSRG 1173
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 19.8 bits (39), Expect = 10.0
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 95 TIDHSSHWETQRDAELRSRG 36
TID S H +R SRG
Sbjct: 1154 TIDPSGHISRRRSMSASSRG 1173
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 19.8 bits (39), Expect = 10.0
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 95 TIDHSSHWETQRDAELRSRG 36
TID S H +R SRG
Sbjct: 1154 TIDPSGHISRRRSMSASSRG 1173
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 19.8 bits (39), Expect = 10.0
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 95 TIDHSSHWETQRDAELRSRG 36
TID S H +R SRG
Sbjct: 1154 TIDPSGHISRRRSMSASSRG 1173
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,429
Number of Sequences: 336
Number of extensions: 2401
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8225022
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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